RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 KRTAP13-1Q8IUC0 172 aa7.45□□□□□ -1.22
LINC00339-203ENST00000420503 CDKN2A-AS1Q9UH64 79 aa7.45□□□□□ -1.22
LINC00339-203ENST00000420503 LBHQ53QV2 105 aaPredicted RBP7.44□□□□□ -1.22
LINC00339-203ENST00000420503 C6orf226Q5I0X4 101 aa7.44□□□□□ -1.22
LINC00339-203ENST00000420503 Q8IZM0 81 aa7.44□□□□□ -1.22
LINC00339-203ENST00000420503 IGLC3P0DOY3 106 aa7.43□□□□□ -1.22
LINC00339-203ENST00000420503 IFI27L1Q96BM0 104 aa7.43□□□□□ -1.22
LINC00339-203ENST00000420503 GEMIN7Q9H840 131 aaKnown RBP7.43□□□□□ -1.22
LINC00339-203ENST00000420503 LINC00304Q8N9R0 145 aa7.42□□□□□ -1.22
LINC00339-203ENST00000420503 CDIP1Q9H305 208 aa7.42□□□□□ -1.22
LINC00339-203ENST00000420503 TP73-AS1Q9UF72 201 aa7.42□□□□□ -1.22
LINC00339-203ENST00000420503 IGLV7-46A0A075B6I9 117 aa7.41□□□□□ -1.22
LINC00339-203ENST00000420503 TRAV12-1A0A0B4J245 112 aa7.41□□□□□ -1.22
LINC00339-203ENST00000420503 SMIM1B2RUZ4 78 aa7.41□□□□□ -1.22
LINC00339-203ENST00000420503 F8VRH5 84 aa7.41□□□□□ -1.22
LINC00339-203ENST00000420503 LEPROTL1O95214 131 aa7.41□□□□□ -1.22
LINC00339-203ENST00000420503 NDUFA6P56556 154 aa7.41□□□□□ -1.22
LINC00339-203ENST00000420503 PRLHP81277 87 aa7.41□□□□□ -1.22
LINC00339-203ENST00000420503 COA6Q5JTJ3 125 aaKnown RBP7.4□□□□□ -1.22
LINC00339-203ENST00000420503 IGKV2-28A0A075B6P5 120 aa7.39□□□□□ -1.23
LINC00339-203ENST00000420503 C11orf86A6NJI1 115 aa7.39□□□□□ -1.23
LINC00339-203ENST00000420503 IGKV2D-28P01615 120 aa7.39□□□□□ -1.23
LINC00339-203ENST00000420503 ZNF22P17026 224 aaPredicted RBP7.39□□□□□ -1.23
LINC00339-203ENST00000420503 UBE2AP49459 152 aa7.39□□□□□ -1.23
LINC00339-203ENST00000420503 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
LINC00339-203ENST00000420503 C3orf22Q8N5N4 141 aa7.39□□□□□ -1.23
LINC00339-203ENST00000420503 KRTAP4-1Q9BYQ7 146 aa7.39□□□□□ -1.23
LINC00339-203ENST00000420503 CHTOPQ9Y3Y2 248 aaKnown RBP7.39□□□□□ -1.23
LINC00339-203ENST00000420503 IGLV5-39A0A0G2JS06 123 aa7.37□□□□□ -1.23
LINC00339-203ENST00000420503 TMEM238C9JI98 176 aa7.37□□□□□ -1.23
LINC00339-203ENST00000420503 SPINK8P0C7L1 97 aa7.37□□□□□ -1.23
LINC00339-203ENST00000420503 FABP4P15090 132 aa7.37□□□□□ -1.23
LINC00339-203ENST00000420503 HSPB8Q9UJY1 196 aa7.37□□□□□ -1.23
LINC00339-203ENST00000420503 IGLV5-37A0A075B6J1 123 aa7.36□□□□□ -1.23
LINC00339-203ENST00000420503 H3BRM9 83 aa7.36□□□□□ -1.23
LINC00339-203ENST00000420503 Q8NDZ9 215 aa7.36□□□□□ -1.23
LINC00339-203ENST00000420503 COX7B2Q8TF08 81 aa7.36□□□□□ -1.23
LINC00339-203ENST00000420503 FSIP2Q5CZC0 6907 aa7.35□□□□□ -1.23
LINC00339-203ENST00000420503 FAM229BQ4G0N7 80 aa7.35□□□□□ -1.23
LINC00339-203ENST00000420503 PPDPFQ9H3Y8 114 aa7.35□□□□□ -1.23
LINC00339-203ENST00000420503 IGKV2D-26A0A0A0MRZ7 120 aa7.34□□□□□ -1.23
LINC00339-203ENST00000420503 H0Y8G0 127 aa7.34□□□□□ -1.23
LINC00339-203ENST00000420503 CXCL5P42830 114 aa7.34□□□□□ -1.23
LINC00339-203ENST00000420503 TMEM170BQ5T4T1 132 aa7.34□□□□□ -1.23
LINC00339-203ENST00000420503 TMEM223A0PJW6 202 aa7.33□□□□□ -1.24
LINC00339-203ENST00000420503 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
LINC00339-203ENST00000420503 NKAPP1Q8N9T2 125 aa7.33□□□□□ -1.24
LINC00339-203ENST00000420503 FAM19A1Q7Z5A9 133 aa7.32□□□□□ -1.24
LINC00339-203ENST00000420503 MAP1LC3CQ9BXW4 147 aa7.32□□□□□ -1.24
LINC00339-203ENST00000420503 SYS1-DBNDD2H3BUS1 97 aa7.31□□□□□ -1.24
LINC00339-203ENST00000420503 M0R378 163 aa7.31□□□□□ -1.24
LINC00339-203ENST00000420503 VPREB1P12018 145 aa7.31□□□□□ -1.24
LINC00339-203ENST00000420503 PFN2P35080 140 aa7.31□□□□□ -1.24
LINC00339-203ENST00000420503 TMEM126AQ9H061 195 aa7.31□□□□□ -1.24
LINC00339-203ENST00000420503 PLNP26678 52 aa7.3□□□□□ -1.24
LINC00339-203ENST00000420503 PLEKHB2Q96CS7 222 aa7.3□□□□□ -1.24
LINC00339-203ENST00000420503 PMCHL2Q9BQD1 86 aa7.3□□□□□ -1.24
LINC00339-203ENST00000420503 DPM2O94777 84 aa7.29□□□□□ -1.24
LINC00339-203ENST00000420503 C3orf79P0CE67 100 aa7.29□□□□□ -1.24
LINC00339-203ENST00000420503 KRTAP13-3Q3SY46 172 aa7.29□□□□□ -1.24
LINC00339-203ENST00000420503 LINC01545Q5VT33 79 aa7.29□□□□□ -1.24
LINC00339-203ENST00000420503 IGKCP01834 107 aa7.28□□□□□ -1.24
LINC00339-203ENST00000420503 PET117Q6UWS5 81 aa7.28□□□□□ -1.24
LINC00339-203ENST00000420503 HIST3H2BBQ8N257 126 aa7.28□□□□□ -1.24
LINC00339-203ENST00000420503 DAND5Q8N907 189 aa7.28□□□□□ -1.24
LINC00339-203ENST00000420503 ZNF625Q96I27 306 aaPredicted RBP7.28□□□□□ -1.24
LINC00339-203ENST00000420503 SND1-IT1Q9HBX3 110 aa7.28□□□□□ -1.24
LINC00339-203ENST00000420503 HIGD2AQ9BW72 106 aa7.27□□□□□ -1.25
LINC00339-203ENST00000420503 SFTA2Q6UW10 78 aa7.26□□□□□ -1.25
LINC00339-203ENST00000420503 CRCT1Q9UGL9 99 aa7.26□□□□□ -1.25
LINC00339-203ENST00000420503 TSPEAR-AS2P59090 65 aa7.25□□□□□ -1.25
LINC00339-203ENST00000420503 ASB16-AS1Q495Z4 193 aa7.25□□□□□ -1.25
LINC00339-203ENST00000420503 HIST1H2BLQ99880 126 aa7.25□□□□□ -1.25
LINC00339-203ENST00000420503 LEPROTO15243 131 aa7.24□□□□□ -1.25
LINC00339-203ENST00000420503 S100A6P06703 90 aa7.24□□□□□ -1.25
LINC00339-203ENST00000420503 KRTDAPP60985 99 aa7.24□□□□□ -1.25
LINC00339-203ENST00000420503 SPRR4Q96PI1 79 aa7.24□□□□□ -1.25
LINC00339-203ENST00000420503 ERG28Q9UKR5 140 aa7.24□□□□□ -1.25
LINC00339-203ENST00000420503 C5orf52A6NGY3 159 aa7.23□□□□□ -1.25
LINC00339-203ENST00000420503 LINC01547P58512 204 aaPredicted RBP7.23□□□□□ -1.25
LINC00339-203ENST00000420503 SNRPEP62304 92 aaKnown RBP7.23□□□□□ -1.25
LINC00339-203ENST00000420503 COX17Q14061 63 aa7.23□□□□□ -1.25
LINC00339-203ENST00000420503 Q8NBF4 154 aa7.23□□□□□ -1.25
LINC00339-203ENST00000420503 E9PLD3 99 aa7.22□□□□□ -1.25
LINC00339-203ENST00000420503 J3QQQ9 107 aa7.22□□□□□ -1.25
LINC00339-203ENST00000420503 HERVK_113P61574 105 aa7.22□□□□□ -1.25
LINC00339-203ENST00000420503 NDUFA12Q9UI09 145 aa7.22□□□□□ -1.25
LINC00339-203ENST00000420503 S100A2P29034 98 aa7.21□□□□□ -1.26
LINC00339-203ENST00000420503 HERV-K104P63124 156 aa7.21□□□□□ -1.26
LINC00339-203ENST00000420503 FP248Q71RG6 208 aaPredicted RBP7.21□□□□□ -1.26
LINC00339-203ENST00000420503 LINC00337Q8N6G1 96 aa7.21□□□□□ -1.26
LINC00339-203ENST00000420503 A0A0U1RRA0 63 aa7.19□□□□□ -1.26
LINC00339-203ENST00000420503 MYMXA0A1B0GTQ4 84 aa7.19□□□□□ -1.26
LINC00339-203ENST00000420503 NMUP48645 174 aa7.19□□□□□ -1.26
LINC00339-203ENST00000420503 C20orf202A1L168 122 aa7.18□□□□□ -1.26
LINC00339-203ENST00000420503 SMIM13P0DJ93 91 aa7.18□□□□□ -1.26
LINC00339-203ENST00000420503 CTAG1AP78358 180 aa7.18□□□□□ -1.26
LINC00339-203ENST00000420503 KRTAP19-2Q3LHN2 52 aa7.18□□□□□ -1.26
LINC00339-203ENST00000420503 SPAG11AQ6PDA7 123 aa7.18□□□□□ -1.26
LINC00339-203ENST00000420503 LGALS3P17931 250 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms