RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 PMVKQ15126 192 aa4.39□□□□□ -1.71
HLA-DPA1-241ENST00000417724 FAM19A2Q8N3H0 131 aa4.39□□□□□ -1.71
HLA-DPA1-241ENST00000417724 ANAPC16Q96DE5 110 aa4.39□□□□□ -1.71
HLA-DPA1-241ENST00000417724 IGLV5-39A0A0G2JS06 123 aa4.38□□□□□ -1.71
HLA-DPA1-241ENST00000417724 CFC1BP0CG36 223 aa4.38□□□□□ -1.71
HLA-DPA1-241ENST00000417724 LCE2CQ5TA81 110 aa4.38□□□□□ -1.71
HLA-DPA1-241ENST00000417724 SLC25A20O43772 301 aa4.37□□□□□ -1.71
HLA-DPA1-241ENST00000417724 RPS29P62273 56 aaKnown RBP4.37□□□□□ -1.71
HLA-DPA1-241ENST00000417724 XP32Q5T750 250 aa4.37□□□□□ -1.71
HLA-DPA1-241ENST00000417724 SFTA2Q6UW10 78 aa4.37□□□□□ -1.71
HLA-DPA1-241ENST00000417724 Q8NDZ9 215 aa4.37□□□□□ -1.71
HLA-DPA1-241ENST00000417724 SMCR5Q8TEV8 140 aa4.37□□□□□ -1.71
HLA-DPA1-241ENST00000417724 ZNF625Q96I27 306 aaPredicted RBP4.37□□□□□ -1.71
HLA-DPA1-241ENST00000417724 hCG_2014768A0A024R1R8 64 aa4.36□□□□□ -1.71
HLA-DPA1-241ENST00000417724 LINC01546A6NGU7 62 aa4.36□□□□□ -1.71
HLA-DPA1-241ENST00000417724 KIAA1644Q3SXP7 199 aa4.36□□□□□ -1.71
HLA-DPA1-241ENST00000417724 SSBP3-AS1Q7Z2R9 100 aa4.36□□□□□ -1.71
HLA-DPA1-241ENST00000417724 Q8N377 158 aa4.36□□□□□ -1.71
HLA-DPA1-241ENST00000417724 IGLC3P0DOY3 106 aa4.35□□□□□ -1.71
HLA-DPA1-241ENST00000417724 NDUFA6P56556 154 aa4.35□□□□□ -1.71
HLA-DPA1-241ENST00000417724 LINC00158P58513 81 aa4.35□□□□□ -1.71
HLA-DPA1-241ENST00000417724 LINC00483Q53H64 154 aa4.35□□□□□ -1.71
HLA-DPA1-241ENST00000417724 ETDCA0A1B0GVM5 59 aa4.34□□□□□ -1.71
HLA-DPA1-241ENST00000417724 PRYO14603 147 aa4.34□□□□□ -1.71
HLA-DPA1-241ENST00000417724 ZNF22P17026 224 aaPredicted RBP4.34□□□□□ -1.71
HLA-DPA1-241ENST00000417724 MT1HP80294 61 aa4.34□□□□□ -1.71
HLA-DPA1-241ENST00000417724 MOBPQ13875 183 aa4.34□□□□□ -1.71
HLA-DPA1-241ENST00000417724 GAGE2AQ6NT46 116 aa4.34□□□□□ -1.71
HLA-DPA1-241ENST00000417724 IGLV9-49A0A0B4J1Y8 123 aa4.33□□□□□ -1.72
HLA-DPA1-241ENST00000417724 ATP6V1G1O75348 118 aa4.33□□□□□ -1.72
HLA-DPA1-241ENST00000417724 SPRR1AP35321 89 aa4.33□□□□□ -1.72
HLA-DPA1-241ENST00000417724 S100A12P80511 92 aa4.33□□□□□ -1.72
HLA-DPA1-241ENST00000417724 KRTAP19-2Q3LHN2 52 aa4.33□□□□□ -1.72
HLA-DPA1-241ENST00000417724 FA2HQ7L5A8 372 aa4.33□□□□□ -1.72
HLA-DPA1-241ENST00000417724 KCNQ1DNQ9H478 68 aa4.33□□□□□ -1.72
HLA-DPA1-241ENST00000417724 SMCO4Q9NRQ5 59 aa4.33□□□□□ -1.72
HLA-DPA1-241ENST00000417724 A0A0U1RRA0 63 aa4.32□□□□□ -1.72
HLA-DPA1-241ENST00000417724 KRTAP4-16G5E9R7 235 aaPredicted RBP4.32□□□□□ -1.72
HLA-DPA1-241ENST00000417724 BOD1L2Q8IYS8 172 aa4.32□□□□□ -1.72
HLA-DPA1-241ENST00000417724 IGLV8-61A0A075B6I0 122 aa4.31□□□□□ -1.72
HLA-DPA1-241ENST00000417724 TRAV9-1A0A075B6T8 112 aa4.31□□□□□ -1.72
HLA-DPA1-241ENST00000417724 LORP23490 312 aaPredicted RBP4.31□□□□□ -1.72
HLA-DPA1-241ENST00000417724 PCOTHQ58A44 107 aa4.31□□□□□ -1.72
HLA-DPA1-241ENST00000417724 TMEM170BQ5T4T1 132 aa4.31□□□□□ -1.72
HLA-DPA1-241ENST00000417724 TRBV10-3A0A0K0K1G6 114 aa4.3□□□□□ -1.72
HLA-DPA1-241ENST00000417724 KRTAP10-6P60371 365 aaPredicted RBP4.3□□□□□ -1.72
HLA-DPA1-241ENST00000417724 C11orf86A6NJI1 115 aa4.29□□□□□ -1.72
HLA-DPA1-241ENST00000417724 B5MCH6 92 aa4.29□□□□□ -1.72
HLA-DPA1-241ENST00000417724 M0R2T5 61 aa4.29□□□□□ -1.72
HLA-DPA1-241ENST00000417724 NCR3O14931 201 aa4.29□□□□□ -1.72
HLA-DPA1-241ENST00000417724 ERC2-IT1O76042 136 aa4.29□□□□□ -1.72
HLA-DPA1-241ENST00000417724 SMIM13P0DJ93 91 aa4.29□□□□□ -1.72
HLA-DPA1-241ENST00000417724 BAGE3Q86Y29 109 aa4.29□□□□□ -1.72
HLA-DPA1-241ENST00000417724 LINC00587B1AMM8 73 aa4.28□□□□□ -1.72
HLA-DPA1-241ENST00000417724 S100PP25815 95 aa4.28□□□□□ -1.72
HLA-DPA1-241ENST00000417724 FABP9Q0Z7S8 132 aa4.28□□□□□ -1.72
HLA-DPA1-241ENST00000417724 COX19Q49B96 90 aa4.28□□□□□ -1.72
HLA-DPA1-241ENST00000417724 MEIG1Q5JSS6 88 aa4.28□□□□□ -1.72
HLA-DPA1-241ENST00000417724 MIR7-3HGQ8N6C7 128 aa4.28□□□□□ -1.72
HLA-DPA1-241ENST00000417724 A0A096LNJ9 63 aa4.27□□□□□ -1.73
HLA-DPA1-241ENST00000417724 HBDP02042 147 aa4.27□□□□□ -1.73
HLA-DPA1-241ENST00000417724 LINC00614P0C842 121 aa4.27□□□□□ -1.73
HLA-DPA1-241ENST00000417724 HERV-K104P63124 156 aa4.27□□□□□ -1.73
HLA-DPA1-241ENST00000417724 C9orf153Q5TBE3 101 aa4.27□□□□□ -1.73
HLA-DPA1-241ENST00000417724 Q6ZRX8 168 aa4.27□□□□□ -1.73
HLA-DPA1-241ENST00000417724 C9orf92A6NGG3 77 aa4.26□□□□□ -1.73
HLA-DPA1-241ENST00000417724 Q9BRP9 147 aa4.26□□□□□ -1.73
HLA-DPA1-241ENST00000417724 LIMD2Q9BT23 127 aa4.26□□□□□ -1.73
HLA-DPA1-241ENST00000417724 MAP1LC3CQ9BXW4 147 aa4.26□□□□□ -1.73
HLA-DPA1-241ENST00000417724 CHTOPQ9Y3Y2 248 aaKnown RBP4.26□□□□□ -1.73
HLA-DPA1-241ENST00000417724 TRBV10-2A0A0K0K1G8 114 aa4.25□□□□□ -1.73
HLA-DPA1-241ENST00000417724 TMEM223A0PJW6 202 aa4.25□□□□□ -1.73
HLA-DPA1-241ENST00000417724 DDTP30046 118 aa4.25□□□□□ -1.73
HLA-DPA1-241ENST00000417724 JOSD1Q15040 202 aaPredicted RBP4.25□□□□□ -1.73
HLA-DPA1-241ENST00000417724 SEC11CQ9BY50 192 aa4.25□□□□□ -1.73
HLA-DPA1-241ENST00000417724 PMCHL1Q16048 86 aa4.24□□□□□ -1.73
HLA-DPA1-241ENST00000417724 COX6B2Q6YFQ2 88 aa4.24□□□□□ -1.73
HLA-DPA1-241ENST00000417724 LOC107984156A0A0G2JMH3 177 aa4.23□□□□□ -1.73
HLA-DPA1-241ENST00000417724 MYMXA0A1B0GTQ4 84 aa4.23□□□□□ -1.73
HLA-DPA1-241ENST00000417724 C5orf52A6NGY3 159 aa4.23□□□□□ -1.73
HLA-DPA1-241ENST00000417724 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
HLA-DPA1-241ENST00000417724 S100A7L2Q5SY68 101 aa4.23□□□□□ -1.73
HLA-DPA1-241ENST00000417724 ARL17AQ8IVW1 177 aa4.23□□□□□ -1.73
HLA-DPA1-241ENST00000417724 C18orf32Q8TCD1 76 aa4.23□□□□□ -1.73
HLA-DPA1-241ENST00000417724 URB1-AS1Q96HZ7 61 aa4.23□□□□□ -1.73
HLA-DPA1-241ENST00000417724 TRAV12-1A0A0B4J245 112 aa4.22□□□□□ -1.73
HLA-DPA1-241ENST00000417724 IGLV6-57P01721 117 aa4.22□□□□□ -1.73
HLA-DPA1-241ENST00000417724 SLC25A34Q6PIV7 304 aa4.22□□□□□ -1.73
HLA-DPA1-241ENST00000417724 HRCT1Q6UXD1 115 aa4.22□□□□□ -1.73
HLA-DPA1-241ENST00000417724 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.21□□□□□ -1.74
HLA-DPA1-241ENST00000417724 HINT1P49773 126 aaPredicted RBP4.21□□□□□ -1.74
HLA-DPA1-241ENST00000417724 ST20-AS1Q8NBB2 130 aa4.21□□□□□ -1.74
HLA-DPA1-241ENST00000417724 MIEN1Q9BRT3 115 aa4.21□□□□□ -1.74
HLA-DPA1-241ENST00000417724 SPANXB1Q9NS25 103 aaPredicted RBP4.21□□□□□ -1.74
HLA-DPA1-241ENST00000417724 TRAV23DV6A0A075B6W5 121 aa4.2□□□□□ -1.74
HLA-DPA1-241ENST00000417724 TMEM218A2RU14 115 aa4.2□□□□□ -1.74
HLA-DPA1-241ENST00000417724 ZNF73O43830 326 aaPredicted RBP4.2□□□□□ -1.74
HLA-DPA1-241ENST00000417724 IFITM2Q01629 132 aa4.2□□□□□ -1.74
HLA-DPA1-241ENST00000417724 UQCC3Q6UW78 93 aa4.2□□□□□ -1.74
HLA-DPA1-241ENST00000417724 IFI27L1Q96BM0 104 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms