RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 COX8AP10176 69 aa5.42□□□□□ -1.54
TRIM48-201ENST00000417545 NPC2P61916 151 aa5.42□□□□□ -1.54
TRIM48-201ENST00000417545 SLC25A34Q6PIV7 304 aa5.42□□□□□ -1.54
TRIM48-201ENST00000417545 FAM19A5Q7Z5A7 132 aaPredicted RBP5.42□□□□□ -1.54
TRIM48-201ENST00000417545 NKAPP1Q8N9T2 125 aa5.42□□□□□ -1.54
TRIM48-201ENST00000417545 COPS9Q8WXC6 57 aa5.42□□□□□ -1.54
TRIM48-201ENST00000417545 C14orf144Q96I85 54 aa5.42□□□□□ -1.54
TRIM48-201ENST00000417545 KRTAP4-9Q9BYQ8 210 aa5.42□□□□□ -1.54
TRIM48-201ENST00000417545 TIMM17BO60830 172 aa5.41□□□□□ -1.54
TRIM48-201ENST00000417545 SRSF9Q13242 221 aaKnown RBP eCLIP5.41□□□□□ -1.54
TRIM48-201ENST00000417545 DAND5Q8N907 189 aa5.41□□□□□ -1.54
TRIM48-201ENST00000417545 SPACA4Q8TDM5 124 aa5.41□□□□□ -1.54
TRIM48-201ENST00000417545 SND1-IT1Q9HBX3 110 aa5.41□□□□□ -1.54
TRIM48-201ENST00000417545 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.41□□□□□ -1.54
TRIM48-201ENST00000417545 FAT2Q9NYQ8 4349 aa5.41□□□□□ -1.54
TRIM48-201ENST00000417545 HECTD4Q9Y4D8 3996 aa5.41□□□□□ -1.54
TRIM48-201ENST00000417545 A0A087WYN8 130 aa5.4□□□□□ -1.54
TRIM48-201ENST00000417545 PCP4L1A6NKN8 68 aa5.4□□□□□ -1.54
TRIM48-201ENST00000417545 HAMPP81172 84 aa5.4□□□□□ -1.54
TRIM48-201ENST00000417545 RPL24P83731 157 aaKnown RBP5.4□□□□□ -1.54
TRIM48-201ENST00000417545 UBE2BP63146 152 aa5.4□□□□□ -1.55
TRIM48-201ENST00000417545 SCXQ7RTU7 201 aa5.4□□□□□ -1.55
TRIM48-201ENST00000417545 BOD1L2Q8IYS8 172 aa5.4□□□□□ -1.55
TRIM48-201ENST00000417545 C7orf33Q8WU49 177 aa5.4□□□□□ -1.55
TRIM48-201ENST00000417545 FAM30AQ9NZY2 134 aa5.4□□□□□ -1.55
TRIM48-201ENST00000417545 M0QXV9 152 aa5.39□□□□□ -1.55
TRIM48-201ENST00000417545 C9orf129Q5T035 196 aaKnown RBP5.39□□□□□ -1.55
TRIM48-201ENST00000417545 Q6ZVH6 145 aa5.39□□□□□ -1.55
TRIM48-201ENST00000417545 HIST1H4GQ99525 98 aa5.39□□□□□ -1.55
TRIM48-201ENST00000417545 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
TRIM48-201ENST00000417545 PKD1P98161 4303 aa5.39□□□□□ -1.55
TRIM48-201ENST00000417545 FAM168BA1KXE4 195 aa5.38□□□□□ -1.55
TRIM48-201ENST00000417545 PANO1I0J062 215 aa5.38□□□□□ -1.55
TRIM48-201ENST00000417545 DLEU1O43261 78 aa5.38□□□□□ -1.55
TRIM48-201ENST00000417545 LBHQ53QV2 105 aaPredicted RBP5.38□□□□□ -1.55
TRIM48-201ENST00000417545 Q6ZSA8 131 aa5.38□□□□□ -1.55
TRIM48-201ENST00000417545 CIRBP-AS1Q8TBR5 109 aa5.38□□□□□ -1.55
TRIM48-201ENST00000417545 SPANXDQ9BXN6 97 aa5.38□□□□□ -1.55
TRIM48-201ENST00000417545 SPANXCQ9NY87 97 aa5.38□□□□□ -1.55
TRIM48-201ENST00000417545 UQCR10Q9UDW1 63 aa5.38□□□□□ -1.55
TRIM48-201ENST00000417545 DNAH11Q96DT5 4516 aa5.37□□□□□ -1.55
TRIM48-201ENST00000417545 TSTD3H0UI37 97 aa5.37□□□□□ -1.55
TRIM48-201ENST00000417545 NCR3O14931 201 aa5.37□□□□□ -1.55
TRIM48-201ENST00000417545 CDK2AP2O75956 126 aa5.37□□□□□ -1.55
TRIM48-201ENST00000417545 IFITM1P13164 125 aa5.37□□□□□ -1.55
TRIM48-201ENST00000417545 HNRNPA3P51991 378 aaKnown RBP5.37□□□□□ -1.55
TRIM48-201ENST00000417545 ADAMTSL4-AS1Q5T5F5 129 aa5.37□□□□□ -1.55
TRIM48-201ENST00000417545 LINC00308Q8TCZ7 52 aa5.37□□□□□ -1.55
TRIM48-201ENST00000417545 PRO1933Q9H354 126 aa5.37□□□□□ -1.55
TRIM48-201ENST00000417545 PLAC8Q9NZF1 115 aa5.37□□□□□ -1.55
TRIM48-201ENST00000417545 TP73-AS1Q9UF72 201 aa5.37□□□□□ -1.55
TRIM48-201ENST00000417545 GAGE10A6NGK3 116 aa5.36□□□□□ -1.55
TRIM48-201ENST00000417545 S100A7L2Q5SY68 101 aa5.36□□□□□ -1.55
TRIM48-201ENST00000417545 SERTAD4-AS1Q5TG53 156 aa5.36□□□□□ -1.55
TRIM48-201ENST00000417545 PHF5AQ7RTV0 110 aaKnown RBP5.36□□□□□ -1.55
TRIM48-201ENST00000417545 SPANXB1Q9NS25 103 aaPredicted RBP5.36□□□□□ -1.55
TRIM48-201ENST00000417545 A0A1W2PNN7 141 aa5.35□□□□□ -1.55
TRIM48-201ENST00000417545 MRPL55Q7Z7F7 128 aaKnown RBP5.35□□□□□ -1.55
TRIM48-201ENST00000417545 MUSTN1Q8IVN3 82 aa5.35□□□□□ -1.55
TRIM48-201ENST00000417545 LITAFQ99732 161 aa5.35□□□□□ -1.55
TRIM48-201ENST00000417545 HIGD1BQ9P298 99 aa5.35□□□□□ -1.55
TRIM48-201ENST00000417545 PLA2G2DQ9UNK4 145 aa5.35□□□□□ -1.55
TRIM48-201ENST00000417545 C22orf24Q9Y442 160 aa5.35□□□□□ -1.55
TRIM48-201ENST00000417545 M0R378 163 aa5.34□□□□□ -1.55
TRIM48-201ENST00000417545 SMR3BP02814 79 aaPredicted RBP5.34□□□□□ -1.55
TRIM48-201ENST00000417545 VPREB1P12018 145 aa5.34□□□□□ -1.55
TRIM48-201ENST00000417545 OR13C6PQ8NH95 151 aa5.34□□□□□ -1.55
TRIM48-201ENST00000417545 PKHD1P08F94 4074 aa5.34□□□□□ -1.55
TRIM48-201ENST00000417545 DNAH5Q8TE73 4624 aa5.34□□□□□ -1.55
TRIM48-201ENST00000417545 IGLV5-37A0A075B6J1 123 aa5.33□□□□□ -1.56
TRIM48-201ENST00000417545 NDUFC2O95298 119 aa5.33□□□□□ -1.56
TRIM48-201ENST00000417545 XGP55808 180 aa5.33□□□□□ -1.56
TRIM48-201ENST00000417545 CBY1Q9Y3M2 126 aa5.33□□□□□ -1.56
TRIM48-201ENST00000417545 IGKV2-28A0A075B6P5 120 aa5.32□□□□□ -1.56
TRIM48-201ENST00000417545 RPL37AP8A6NKH3 93 aa5.32□□□□□ -1.56
TRIM48-201ENST00000417545 IGKV2D-28P01615 120 aa5.32□□□□□ -1.56
TRIM48-201ENST00000417545 RPL37AP61513 92 aaKnown RBP5.32□□□□□ -1.56
TRIM48-201ENST00000417545 HSD52Q0P140 79 aa5.32□□□□□ -1.56
TRIM48-201ENST00000417545 TAL2Q16559 108 aa5.32□□□□□ -1.56
TRIM48-201ENST00000417545 SOSTDC1Q6X4U4 206 aa5.32□□□□□ -1.56
TRIM48-201ENST00000417545 C2orf91Q6ZV80 131 aa5.32□□□□□ -1.56
TRIM48-201ENST00000417545 LINC00167Q96N53 147 aa5.32□□□□□ -1.56
TRIM48-201ENST00000417545 LOC107984156A0A0G2JMH3 177 aa5.31□□□□□ -1.56
TRIM48-201ENST00000417545 TRBV10-2A0A0K0K1G8 114 aa5.31□□□□□ -1.56
TRIM48-201ENST00000417545 A6NDN8 102 aa5.31□□□□□ -1.56
TRIM48-201ENST00000417545 PLA2G1BP04054 148 aaKnown RBP5.31□□□□□ -1.56
TRIM48-201ENST00000417545 DDTP30046 118 aa5.31□□□□□ -1.56
TRIM48-201ENST00000417545 PRR3P79522 188 aaKnown RBP5.31□□□□□ -1.56
TRIM48-201ENST00000417545 ARL17AQ8IVW1 177 aa5.31□□□□□ -1.56
TRIM48-201ENST00000417545 RAB37Q96AX2 223 aa5.31□□□□□ -1.56
TRIM48-201ENST00000417545 CEND1Q8N111 149 aa5.31□□□□□ -1.56
TRIM48-201ENST00000417545 PPDPFQ9H3Y8 114 aa5.31□□□□□ -1.56
TRIM48-201ENST00000417545 EPPK1P58107 5090 aaKnown RBP5.3□□□□□ -1.56
TRIM48-201ENST00000417545 TRAV13-2A0A0B4J235 113 aa5.3□□□□□ -1.56
TRIM48-201ENST00000417545 A4D1N5 150 aa5.3□□□□□ -1.56
TRIM48-201ENST00000417545 C1orf137Q5JT78 98 aa5.3□□□□□ -1.56
TRIM48-201ENST00000417545 Q8NDZ9 215 aa5.3□□□□□ -1.56
TRIM48-201ENST00000417545 TMEM126AQ9H061 195 aa5.3□□□□□ -1.56
TRIM48-201ENST00000417545 DYNC1H1Q14204 4646 aaKnown RBP5.3□□□□□ -1.56
TRIM48-201ENST00000417545 TRBV10-3A0A0K0K1G6 114 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms