RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 OXTP01178 125 aa13.13□□□□□ -0.31
PTPRU-203ENST00000415600 HERV-K104P63124 156 aa13.13□□□□□ -0.31
PTPRU-203ENST00000415600 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.11□□□□□ -0.31
PTPRU-203ENST00000415600 C9orf118A6NHY6 69 aa13.11□□□□□ -0.31
PTPRU-203ENST00000415600 K7ERJ3 54 aa13.1□□□□□ -0.31
PTPRU-203ENST00000415600 KRTAP10-4P60372 401 aaPredicted RBP13.1□□□□□ -0.31
PTPRU-203ENST00000415600 CIRBPQ14011 172 aaKnown RBP13.1□□□□□ -0.31
PTPRU-203ENST00000415600 ADAMTSL4-AS1Q5T5F5 129 aa13.1□□□□□ -0.31
PTPRU-203ENST00000415600 TOMM7Q9P0U1 55 aa13.1□□□□□ -0.31
PTPRU-203ENST00000415600 PKIGQ9Y2B9 76 aa13.1□□□□□ -0.31
PTPRU-203ENST00000415600 COX7A2LO14548 114 aa13.09□□□□□ -0.31
PTPRU-203ENST00000415600 RAB37Q96AX2 223 aa13.09□□□□□ -0.31
PTPRU-203ENST00000415600 RPL24P83731 157 aaKnown RBP13.08□□□□□ -0.32
PTPRU-203ENST00000415600 FOXI1Q12951 378 aa13.08□□□□□ -0.32
PTPRU-203ENST00000415600 SFTA2Q6UW10 78 aa13.08□□□□□ -0.32
PTPRU-203ENST00000415600 MUSTN1Q8IVN3 82 aa13.08□□□□□ -0.32
PTPRU-203ENST00000415600 Q8IZM0 81 aa13.07□□□□□ -0.32
PTPRU-203ENST00000415600 C15orf56Q8N910 161 aa13.07□□□□□ -0.32
PTPRU-203ENST00000415600 IFITM1P13164 125 aa13.06□□□□□ -0.32
PTPRU-203ENST00000415600 MEIG1Q5JSS6 88 aa13.05□□□□□ -0.32
PTPRU-203ENST00000415600 SERTAD4-AS1Q5TG53 156 aa13.05□□□□□ -0.32
PTPRU-203ENST00000415600 GVQW2A0A096LPI5 108 aaPredicted RBP13.04□□□□□ -0.32
PTPRU-203ENST00000415600 A4D1N5 150 aa13.04□□□□□ -0.32
PTPRU-203ENST00000415600 H3BUT2 72 aa13.04□□□□□ -0.32
PTPRU-203ENST00000415600 HIGD2BQ4VC39 106 aa13.04□□□□□ -0.32
PTPRU-203ENST00000415600 PANO1I0J062 215 aa13.03□□□□□ -0.32
PTPRU-203ENST00000415600 SLPIP03973 132 aa13.03□□□□□ -0.32
PTPRU-203ENST00000415600 PRSS2P07478 247 aa13.03□□□□□ -0.32
PTPRU-203ENST00000415600 MALP21145 153 aa13.03□□□□□ -0.32
PTPRU-203ENST00000415600 C6orf226Q5I0X4 101 aa13.03□□□□□ -0.32
PTPRU-203ENST00000415600 SPACA4Q8TDM5 124 aa13.03□□□□□ -0.32
PTPRU-203ENST00000415600 C7orf33Q8WU49 177 aa13.03□□□□□ -0.32
PTPRU-203ENST00000415600 A0A087WYN8 130 aa13.02□□□□□ -0.33
PTPRU-203ENST00000415600 APOMO95445 188 aa13.02□□□□□ -0.33
PTPRU-203ENST00000415600 CFC1BP0CG36 223 aa13.02□□□□□ -0.33
PTPRU-203ENST00000415600 CFC1P0CG37 223 aa13.02□□□□□ -0.33
PTPRU-203ENST00000415600 KIAA0087Q14695 138 aa13.02□□□□□ -0.33
PTPRU-203ENST00000415600 VAMP3Q15836 100 aa13.02□□□□□ -0.33
PTPRU-203ENST00000415600 LINC00474Q9P2X8 69 aa13.02□□□□□ -0.33
PTPRU-203ENST00000415600 A0A0B4J2C4 111 aa13.01□□□□□ -0.33
PTPRU-203ENST00000415600 PPDPFQ9H3Y8 114 aa13.01□□□□□ -0.33
PTPRU-203ENST00000415600 CXCL5P42830 114 aa13□□□□□ -0.33
PTPRU-203ENST00000415600 DAND5Q8N907 189 aa13□□□□□ -0.33
PTPRU-203ENST00000415600 COPS9Q8WXC6 57 aa13□□□□□ -0.33
PTPRU-203ENST00000415600 NAA38Q9BRA0 125 aaKnown RBP13□□□□□ -0.33
PTPRU-203ENST00000415600 PLAC8Q9NZF1 115 aa13□□□□□ -0.33
PTPRU-203ENST00000415600 A0A1W2PPM0 123 aa12.99□□□□□ -0.33
PTPRU-203ENST00000415600 CHTF8P0CG12 524 aa12.99□□□□□ -0.33
PTPRU-203ENST00000415600 LINC00308Q8TCZ7 52 aa12.99□□□□□ -0.33
PTPRU-203ENST00000415600 A0A0U1RRA0 63 aa12.98□□□□□ -0.33
PTPRU-203ENST00000415600 ZNF561-AS1K7EIQ3 104 aa12.98□□□□□ -0.33
PTPRU-203ENST00000415600 NPC2P61916 151 aa12.98□□□□□ -0.33
PTPRU-203ENST00000415600 EIF4EBP3O60516 100 aaPredicted RBP12.97□□□□□ -0.33
PTPRU-203ENST00000415600 UBE2V1Q13404 147 aa12.97□□□□□ -0.33
PTPRU-203ENST00000415600 Q6ZRU5 148 aa12.97□□□□□ -0.33
PTPRU-203ENST00000415600 PRO1854Q9UHT4 67 aa12.97□□□□□ -0.33
PTPRU-203ENST00000415600 IGKV2-24A0A0C4DH68 120 aa12.96□□□□□ -0.33
PTPRU-203ENST00000415600 CKS1BP61024 79 aa12.96□□□□□ -0.33
PTPRU-203ENST00000415600 FABP2P12104 132 aa12.95□□□□□ -0.34
PTPRU-203ENST00000415600 CARD19Q96LW7 228 aa12.95□□□□□ -0.34
PTPRU-203ENST00000415600 ERG28Q9UKR5 140 aa12.95□□□□□ -0.34
PTPRU-203ENST00000415600 TSPAN13O95857 204 aa12.94□□□□□ -0.34
PTPRU-203ENST00000415600 SPAG11BQ08648 103 aa12.94□□□□□ -0.34
PTPRU-203ENST00000415600 C2orf82Q6UX34 121 aa12.94□□□□□ -0.34
PTPRU-203ENST00000415600 SOSTDC1Q6X4U4 206 aa12.94□□□□□ -0.34
PTPRU-203ENST00000415600 LINC00158P58513 81 aa12.94□□□□□ -0.34
PTPRU-203ENST00000415600 MIR7-3HGQ8N6C7 128 aa12.94□□□□□ -0.34
PTPRU-203ENST00000415600 GAGE10A6NGK3 116 aa12.92□□□□□ -0.34
PTPRU-203ENST00000415600 K7EP34 96 aa12.92□□□□□ -0.34
PTPRU-203ENST00000415600 SYCNQ0VAF6 134 aa12.92□□□□□ -0.34
PTPRU-203ENST00000415600 GTF2H5Q6ZYL4 71 aa12.92□□□□□ -0.34
PTPRU-203ENST00000415600 LRP1Q07954 4544 aaKnown RBP12.92□□□□□ -0.34
PTPRU-203ENST00000415600 SPCS1Q9Y6A9 102 aa12.91□□□□□ -0.34
PTPRU-203ENST00000415600 PFN2P35080 140 aa12.9□□□□□ -0.34
PTPRU-203ENST00000415600 COX17Q14061 63 aa12.9□□□□□ -0.35
PTPRU-203ENST00000415600 A0A096LNI7 61 aa12.89□□□□□ -0.35
PTPRU-203ENST00000415600 LINC00526Q96FQ7 95 aa12.87□□□□□ -0.35
PTPRU-203ENST00000415600 PLA2G2DQ9UNK4 145 aa12.87□□□□□ -0.35
PTPRU-203ENST00000415600 LYRM7Q5U5X0 104 aa12.86□□□□□ -0.35
PTPRU-203ENST00000415600 FAT3Q8TDW7 4589 aa12.86□□□□□ -0.35
PTPRU-203ENST00000415600 LOC107984640A0A0U1RRK4 108 aa12.86□□□□□ -0.35
PTPRU-203ENST00000415600 C10orf25Q5T742 122 aa12.85□□□□□ -0.35
PTPRU-203ENST00000415600 UNQ6190/PRO20217Q6UXQ8 127 aa12.85□□□□□ -0.35
PTPRU-203ENST00000415600 CAMK2N2Q96S95 79 aa12.85□□□□□ -0.35
PTPRU-203ENST00000415600 PKHD1L1Q86WI1 4243 aa12.85□□□□□ -0.35
PTPRU-203ENST00000415600 LOC107984156A0A0G2JMH3 177 aa12.84□□□□□ -0.35
PTPRU-203ENST00000415600 PRR3P79522 188 aaKnown RBP12.84□□□□□ -0.35
PTPRU-203ENST00000415600 ARL17AQ8IVW1 177 aa12.84□□□□□ -0.35
PTPRU-203ENST00000415600 C2orf48Q96LS8 159 aa12.84□□□□□ -0.35
PTPRU-203ENST00000415600 SND1-IT1Q9HBX3 110 aa12.84□□□□□ -0.35
PTPRU-203ENST00000415600 H7C2G1 150 aa12.82□□□□□ -0.36
PTPRU-203ENST00000415600 RPL13AP40429 203 aaKnown RBP12.82□□□□□ -0.36
PTPRU-203ENST00000415600 Q1RN00 199 aa12.82□□□□□ -0.36
PTPRU-203ENST00000415600 F8WDY8 70 aa12.81□□□□□ -0.36
PTPRU-203ENST00000415600 GAGE2BQ13066 116 aa12.81□□□□□ -0.36
PTPRU-203ENST00000415600 C9orf116Q5BN46 136 aaPredicted RBP12.81□□□□□ -0.36
PTPRU-203ENST00000415600 TRBV30A0A0K0K1B3 111 aa12.81□□□□□ -0.36
PTPRU-203ENST00000415600 PSMB2P49721 201 aa12.81□□□□□ -0.36
PTPRU-203ENST00000415600 C6orf48Q9UBA6 75 aa12.8□□□□□ -0.36
PTPRU-203ENST00000415600 Q6ZRP5 223 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms