RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 Q6ZRP5 223 aa12.8□□□□□ -0.36
SHANK3-202ENST00000414786 SPATA3Q8NHX4 192 aa12.8□□□□□ -0.36
SHANK3-202ENST00000414786 FAM19A4Q96LR4 140 aa12.79□□□□□ -0.36
SHANK3-202ENST00000414786 ZFYVE26Q68DK2 2539 aa12.79□□□□□ -0.36
SHANK3-202ENST00000414786 LRRK2Q5S007 2527 aa12.78□□□□□ -0.36
SHANK3-202ENST00000414786 A0A0D9SG42 100 aa12.78□□□□□ -0.36
SHANK3-202ENST00000414786 FAM168BA1KXE4 195 aa12.78□□□□□ -0.36
SHANK3-202ENST00000414786 KRTAP24-1Q3LI83 254 aa12.78□□□□□ -0.36
SHANK3-202ENST00000414786 LINC00476Q8WZB0 136 aa12.77□□□□□ -0.37
SHANK3-202ENST00000414786 A0A1B0GUV1 79 aa12.74□□□□□ -0.37
SHANK3-202ENST00000414786 NBDYA0A0U1RRE5 68 aa12.74□□□□□ -0.37
SHANK3-202ENST00000414786 C9orf129Q5T035 196 aaKnown RBP12.74□□□□□ -0.37
SHANK3-202ENST00000414786 DSCR10P59022 87 aa12.74□□□□□ -0.37
SHANK3-202ENST00000414786 FN1P02751 2386 aaKnown RBP12.74□□□□□ -0.37
SHANK3-202ENST00000414786 F8P00451 2351 aa12.73□□□□□ -0.37
SHANK3-202ENST00000414786 AMELXQ99217 191 aa12.72□□□□□ -0.37
SHANK3-202ENST00000414786 URB1-AS1Q96HZ7 61 aa12.72□□□□□ -0.37
SHANK3-202ENST00000414786 OBSCN-AS1Q96MR7 158 aa12.71□□□□□ -0.37
SHANK3-202ENST00000414786 TLN1Q9Y490 2541 aaKnown RBP12.71□□□□□ -0.38
SHANK3-202ENST00000414786 KIF25-AS1Q9Y6Z4 181 aa12.71□□□□□ -0.38
SHANK3-202ENST00000414786 DNAH10OSP0CZ25 163 aa12.7□□□□□ -0.38
SHANK3-202ENST00000414786 Q8NBF4 154 aa12.7□□□□□ -0.38
SHANK3-202ENST00000414786 LINC01600Q96MT4 127 aa12.69□□□□□ -0.38
SHANK3-202ENST00000414786 WWC2-AS2Q96NR7 200 aa12.69□□□□□ -0.38
SHANK3-202ENST00000414786 TLN2Q9Y4G6 2542 aa12.68□□□□□ -0.38
SHANK3-202ENST00000414786 C4orf26Q17RF5 130 aa12.68□□□□□ -0.38
SHANK3-202ENST00000414786 IGLV5-37A0A075B6J1 123 aa12.67□□□□□ -0.38
SHANK3-202ENST00000414786 LINC00588Q9Y4M8 146 aa12.67□□□□□ -0.38
SHANK3-202ENST00000414786 LINC00310P59036 64 aa12.67□□□□□ -0.38
SHANK3-202ENST00000414786 ZNF575Q86XF7 245 aa12.66□□□□□ -0.38
SHANK3-202ENST00000414786 CNFNQ9BYD5 112 aa12.66□□□□□ -0.38
SHANK3-202ENST00000414786 ANAPC11Q9NYG5 84 aa12.66□□□□□ -0.38
SHANK3-202ENST00000414786 K7EQZ3 153 aa12.66□□□□□ -0.38
SHANK3-202ENST00000414786 F8WDY8 70 aa12.66□□□□□ -0.38
SHANK3-202ENST00000414786 NAV2Q8IVL1 2488 aa12.66□□□□□ -0.38
SHANK3-202ENST00000414786 CRIPTQ9P021 101 aa12.66□□□□□ -0.38
SHANK3-202ENST00000414786 C8orf87E5RJ46 101 aa12.65□□□□□ -0.38
SHANK3-202ENST00000414786 M0R2T5 61 aa12.64□□□□□ -0.39
SHANK3-202ENST00000414786 TP53AIP1Q9HCN2 124 aa12.64□□□□□ -0.39
SHANK3-202ENST00000414786 JMJD1CQ15652 2540 aa12.64□□□□□ -0.39
SHANK3-202ENST00000414786 TRAV22A0A0B4J277 110 aa12.62□□□□□ -0.39
SHANK3-202ENST00000414786 CXCL6P80162 114 aa12.61□□□□□ -0.39
SHANK3-202ENST00000414786 ACANP16112 2415 aa12.61□□□□□ -0.39
SHANK3-202ENST00000414786 A0A0G2JQZ4 141 aa12.61□□□□□ -0.39
SHANK3-202ENST00000414786 A0A1W2PNN7 141 aa12.61□□□□□ -0.39
SHANK3-202ENST00000414786 LTBP2Q14767 1821 aa12.6□□□□□ -0.39
SHANK3-202ENST00000414786 FAM218AQ96MZ4 157 aa12.57□□□□□ -0.4
SHANK3-202ENST00000414786 BCE1O60756 84 aa12.56□□□□□ -0.4
SHANK3-202ENST00000414786 LINC00304Q8N9R0 145 aa12.56□□□□□ -0.4
SHANK3-202ENST00000414786 TM2D3Q9BRN9 247 aa12.55□□□□□ -0.4
SHANK3-202ENST00000414786 Q6ZRX8 168 aa12.54□□□□□ -0.4
SHANK3-202ENST00000414786 PRO3102Q9H379 93 aa12.54□□□□□ -0.4
SHANK3-202ENST00000414786 C11orf72Q8NBR9 251 aa12.53□□□□□ -0.4
SHANK3-202ENST00000414786 CSNK1G2-AS1Q8NCQ2 148 aa12.53□□□□□ -0.4
SHANK3-202ENST00000414786 ELOF1P60002 83 aaKnown RBP12.51□□□□□ -0.41
SHANK3-202ENST00000414786 A0A096LNJ9 63 aa12.51□□□□□ -0.41
SHANK3-202ENST00000414786 PRO0628Q9UI54 55 aa12.5□□□□□ -0.41
SHANK3-202ENST00000414786 ABCA12Q86UK0 2595 aa12.5□□□□□ -0.41
SHANK3-202ENST00000414786 IGLV5-39A0A0G2JS06 123 aa12.49□□□□□ -0.41
SHANK3-202ENST00000414786 Q6ZQT0 140 aa12.49□□□□□ -0.41
SHANK3-202ENST00000414786 RBM12B-AS1Q9P1G2 102 aa12.49□□□□□ -0.41
SHANK3-202ENST00000414786 TRBV7-4A0A0J9YYF1 115 aa12.48□□□□□ -0.41
SHANK3-202ENST00000414786 IGLV5-48A0A075B6I7 105 aa12.48□□□□□ -0.41
SHANK3-202ENST00000414786 IGF2RP11717 2491 aa12.47□□□□□ -0.41
SHANK3-202ENST00000414786 IGHV3OR16-9A0A0B4J2B5 98 aa12.47□□□□□ -0.41
SHANK3-202ENST00000414786 COL27A1Q8IZC6 1860 aaPredicted RBP12.46□□□□□ -0.41
SHANK3-202ENST00000414786 SETD2Q9BYW2 2564 aaPredicted RBP12.46□□□□□ -0.41
SHANK3-202ENST00000414786 Q8N1X5 172 aa12.46□□□□□ -0.41
SHANK3-202ENST00000414786 LINC01561Q8N1V8 128 aa12.45□□□□□ -0.42
SHANK3-202ENST00000414786 MRPL34Q9BQ48 92 aaKnown RBP12.45□□□□□ -0.42
SHANK3-202ENST00000414786 ZNF462Q96JM2 2506 aa12.45□□□□□ -0.42
SHANK3-202ENST00000414786 COA5Q86WW8 74 aa12.44□□□□□ -0.42
SHANK3-202ENST00000414786 IGLV5-45A0A087WSX0 123 aa12.43□□□□□ -0.42
SHANK3-202ENST00000414786 NCOR2Q9Y618 2525 aa12.42□□□□□ -0.42
SHANK3-202ENST00000414786 VPREB1P12018 145 aa12.41□□□□□ -0.42
SHANK3-202ENST00000414786 A8MUN3 132 aa12.41□□□□□ -0.42
SHANK3-202ENST00000414786 IGLV1-50A0A075B6I6 118 aa12.4□□□□□ -0.42
SHANK3-202ENST00000414786 MIR22HGQ0VDD5 57 aa12.38□□□□□ -0.43
SHANK3-202ENST00000414786 Q8NAQ8 132 aa12.37□□□□□ -0.43
SHANK3-202ENST00000414786 C15orf56Q8N910 161 aa12.37□□□□□ -0.43
SHANK3-202ENST00000414786 A8MWP4 228 aa12.37□□□□□ -0.43
SHANK3-202ENST00000414786 KRTAP10-11P60412 298 aa12.36□□□□□ -0.43
SHANK3-202ENST00000414786 CENPFP49454 3210 aa12.36□□□□□ -0.43
SHANK3-202ENST00000414786 LOC101927531A0A1B0GV80 90 aa12.34□□□□□ -0.43
SHANK3-202ENST00000414786 UQCR11O14957 56 aa12.34□□□□□ -0.43
SHANK3-202ENST00000414786 K7EIL1 84 aa12.31□□□□□ -0.44
SHANK3-202ENST00000414786 PKD1L2Q7Z442 2459 aa12.31□□□□□ -0.44
SHANK3-202ENST00000414786 SMCPP49901 116 aaPredicted RBP12.31□□□□□ -0.44
SHANK3-202ENST00000414786 CAMK2N1Q7Z7J9 78 aa12.3□□□□□ -0.44
SHANK3-202ENST00000414786 GVQW2A0A096LPI5 108 aaPredicted RBP12.27□□□□□ -0.44
SHANK3-202ENST00000414786 IGFL1Q6UW32 110 aa12.27□□□□□ -0.45
SHANK3-202ENST00000414786 LINC00528Q8N1L1 170 aa12.26□□□□□ -0.45
SHANK3-202ENST00000414786 Q6ZSA8 131 aa12.25□□□□□ -0.45
SHANK3-202ENST00000414786 C8orf17Q9NRJ1 99 aa12.25□□□□□ -0.45
SHANK3-202ENST00000414786 COX8CQ7Z4L0 72 aa12.24□□□□□ -0.45
SHANK3-202ENST00000414786 LUZP6Q538Z0 58 aa12.23□□□□□ -0.45
SHANK3-202ENST00000414786 H3BNG1 76 aa12.23□□□□□ -0.45
SHANK3-202ENST00000414786 ZNF861PO60384 105 aa12.22□□□□□ -0.45
SHANK3-202ENST00000414786 WIPF1O43516 503 aa12.21□□□□□ -0.45
SHANK3-202ENST00000414786 A0A087WTM6 91 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms