RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 C9orf116Q5BN46 136 aaPredicted RBP4.35□□□□□ -1.71
LINC00343-201ENST00000414368 Q6ZSA8 131 aa4.35□□□□□ -1.71
LINC00343-201ENST00000414368 STPG4Q8N801 248 aa4.35□□□□□ -1.71
LINC00343-201ENST00000414368 COX7B2Q8TF08 81 aa4.35□□□□□ -1.71
LINC00343-201ENST00000414368 C6orf48Q9UBA6 75 aa4.35□□□□□ -1.71
LINC00343-201ENST00000414368 A0A096LNI7 61 aa4.34□□□□□ -1.71
LINC00343-201ENST00000414368 TMEM223A0PJW6 202 aa4.34□□□□□ -1.71
LINC00343-201ENST00000414368 SMR3BP02814 79 aaPredicted RBP4.34□□□□□ -1.71
LINC00343-201ENST00000414368 C3orf79P0CE67 100 aa4.34□□□□□ -1.71
LINC00343-201ENST00000414368 KRTDAPP60985 99 aa4.34□□□□□ -1.71
LINC00343-201ENST00000414368 CKS1BP61024 79 aa4.34□□□□□ -1.71
LINC00343-201ENST00000414368 SMIM29Q86T20 159 aa4.34□□□□□ -1.71
LINC00343-201ENST00000414368 Q8IZM0 81 aa4.34□□□□□ -1.71
LINC00343-201ENST00000414368 HIST3H2BBQ8N257 126 aa4.34□□□□□ -1.71
LINC00343-201ENST00000414368 DPH3Q96FX2 82 aa4.34□□□□□ -1.71
LINC00343-201ENST00000414368 HERC2O95714 4834 aa4.33□□□□□ -1.72
LINC00343-201ENST00000414368 LOC107984640A0A0U1RRK4 108 aa4.33□□□□□ -1.72
LINC00343-201ENST00000414368 F8WDY8 70 aa4.33□□□□□ -1.72
LINC00343-201ENST00000414368 DPM2O94777 84 aa4.33□□□□□ -1.72
LINC00343-201ENST00000414368 S100A6P06703 90 aa4.33□□□□□ -1.72
LINC00343-201ENST00000414368 MAJINQ3KP22 176 aa4.33□□□□□ -1.72
LINC00343-201ENST00000414368 SCXQ7RTU7 201 aa4.33□□□□□ -1.72
LINC00343-201ENST00000414368 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
LINC00343-201ENST00000414368 IGKCP01834 107 aa4.32□□□□□ -1.72
LINC00343-201ENST00000414368 PLNP26678 52 aa4.32□□□□□ -1.72
LINC00343-201ENST00000414368 S100A2P29034 98 aa4.32□□□□□ -1.72
LINC00343-201ENST00000414368 RPL18AQ02543 176 aaKnown RBP4.32□□□□□ -1.72
LINC00343-201ENST00000414368 CIRBPQ14011 172 aaKnown RBP4.32□□□□□ -1.72
LINC00343-201ENST00000414368 LINC01545Q5VT33 79 aa4.32□□□□□ -1.72
LINC00343-201ENST00000414368 PET117Q6UWS5 81 aa4.32□□□□□ -1.72
LINC00343-201ENST00000414368 Q6ZRP5 223 aa4.32□□□□□ -1.72
LINC00343-201ENST00000414368 SPACA4Q8TDM5 124 aa4.32□□□□□ -1.72
LINC00343-201ENST00000414368 HIST1H2BLQ99880 126 aa4.32□□□□□ -1.72
LINC00343-201ENST00000414368 A0A087WYN8 130 aa4.31□□□□□ -1.72
LINC00343-201ENST00000414368 TRBV30A0A0K0K1B3 111 aa4.31□□□□□ -1.72
LINC00343-201ENST00000414368 A0A1W2PNN7 141 aa4.31□□□□□ -1.72
LINC00343-201ENST00000414368 C5orf52A6NGY3 159 aa4.31□□□□□ -1.72
LINC00343-201ENST00000414368 ZNF625Q96I27 306 aaPredicted RBP4.31□□□□□ -1.72
LINC00343-201ENST00000414368 TLX1NBP0CAT3 122 aa4.3□□□□□ -1.72
LINC00343-201ENST00000414368 CXCL5P42830 114 aa4.3□□□□□ -1.72
LINC00343-201ENST00000414368 LINC01547P58512 204 aaPredicted RBP4.3□□□□□ -1.72
LINC00343-201ENST00000414368 TSPEAR-AS2P59090 65 aa4.3□□□□□ -1.72
LINC00343-201ENST00000414368 ATOH7Q8N100 152 aa4.3□□□□□ -1.72
LINC00343-201ENST00000414368 PLAC8Q9NZF1 115 aa4.3□□□□□ -1.72
LINC00343-201ENST00000414368 IGLV9-49A0A0B4J1Y8 123 aa4.29□□□□□ -1.72
LINC00343-201ENST00000414368 FAM168BA1KXE4 195 aa4.29□□□□□ -1.72
LINC00343-201ENST00000414368 NDUFC2-KCTD14E9PQ53 114 aa4.29□□□□□ -1.72
LINC00343-201ENST00000414368 LEPROTO15243 131 aa4.29□□□□□ -1.72
LINC00343-201ENST00000414368 PFN2P35080 140 aa4.29□□□□□ -1.72
LINC00343-201ENST00000414368 C9orf129Q5T035 196 aaKnown RBP4.29□□□□□ -1.72
LINC00343-201ENST00000414368 XAGE1AQ9HD64 81 aa4.29□□□□□ -1.72
LINC00343-201ENST00000414368 LINC00474Q9P2X8 69 aa4.29□□□□□ -1.72
LINC00343-201ENST00000414368 A0A0U1RRA0 63 aa4.28□□□□□ -1.72
LINC00343-201ENST00000414368 J3QQQ9 107 aa4.28□□□□□ -1.72
LINC00343-201ENST00000414368 HERVK_113P61574 105 aa4.28□□□□□ -1.72
LINC00343-201ENST00000414368 KRTAP7-1Q8IUC3 87 aa4.28□□□□□ -1.72
LINC00343-201ENST00000414368 PLEKHB2Q96CS7 222 aa4.28□□□□□ -1.72
LINC00343-201ENST00000414368 NDUFA12Q9UI09 145 aa4.28□□□□□ -1.72
LINC00343-201ENST00000414368 ERG28Q9UKR5 140 aa4.28□□□□□ -1.72
LINC00343-201ENST00000414368 PKIGQ9Y2B9 76 aa4.28□□□□□ -1.72
LINC00343-201ENST00000414368 VPS13BQ7Z7G8 4022 aa4.27□□□□□ -1.73
LINC00343-201ENST00000414368 IGKV2D-26A0A0A0MRZ7 120 aa4.27□□□□□ -1.73
LINC00343-201ENST00000414368 C20orf202A1L168 122 aa4.27□□□□□ -1.73
LINC00343-201ENST00000414368 E9PLD3 99 aa4.27□□□□□ -1.73
LINC00343-201ENST00000414368 LGALS3P17931 250 aaKnown RBP4.27□□□□□ -1.73
LINC00343-201ENST00000414368 Q5VSD8 79 aa4.27□□□□□ -1.73
LINC00343-201ENST00000414368 FAM19A5Q7Z5A7 132 aaPredicted RBP4.27□□□□□ -1.73
LINC00343-201ENST00000414368 TTTY13Q9BZ97 58 aa4.27□□□□□ -1.73
LINC00343-201ENST00000414368 FLG2Q5D862 2391 aaPredicted RBP4.27□□□□□ -1.73
LINC00343-201ENST00000414368 MYMXA0A1B0GTQ4 84 aa4.26□□□□□ -1.73
LINC00343-201ENST00000414368 EPM2AB3EWF7 344 aa4.26□□□□□ -1.73
LINC00343-201ENST00000414368 SMIM13P0DJ93 91 aa4.26□□□□□ -1.73
LINC00343-201ENST00000414368 LINC00158P58513 81 aa4.26□□□□□ -1.73
LINC00343-201ENST00000414368 PHF5AQ7RTV0 110 aaKnown RBP4.26□□□□□ -1.73
LINC00343-201ENST00000414368 SND1-IT1Q9HBX3 110 aa4.26□□□□□ -1.73
LINC00343-201ENST00000414368 HERV-K104P63124 156 aa4.25□□□□□ -1.73
LINC00343-201ENST00000414368 COX17Q14061 63 aa4.25□□□□□ -1.73
LINC00343-201ENST00000414368 MEIG1Q5JSS6 88 aa4.25□□□□□ -1.73
LINC00343-201ENST00000414368 SFTA2Q6UW10 78 aa4.25□□□□□ -1.73
LINC00343-201ENST00000414368 ABCA13Q86UQ4 5058 aa4.25□□□□□ -1.73
LINC00343-201ENST00000414368 A0A0J9YXY3 114 aa4.24□□□□□ -1.73
LINC00343-201ENST00000414368 NMUP48645 174 aa4.24□□□□□ -1.73
LINC00343-201ENST00000414368 KRTAP10-4P60372 401 aaPredicted RBP4.24□□□□□ -1.73
LINC00343-201ENST00000414368 KRTAP11-1Q8IUC1 163 aa4.24□□□□□ -1.73
LINC00343-201ENST00000414368 MIR7-3HGQ8N6C7 128 aa4.24□□□□□ -1.73
LINC00343-201ENST00000414368 DAND5Q8N907 189 aa4.24□□□□□ -1.73
LINC00343-201ENST00000414368 Q8NDZ9 215 aa4.24□□□□□ -1.73
LINC00343-201ENST00000414368 C22orf24Q9Y442 160 aa4.24□□□□□ -1.73
LINC00343-201ENST00000414368 ZNF815PA8K554 130 aa4.23□□□□□ -1.73
LINC00343-201ENST00000414368 M0QXV9 152 aa4.23□□□□□ -1.73
LINC00343-201ENST00000414368 RPL37AP61513 92 aaKnown RBP4.23□□□□□ -1.73
LINC00343-201ENST00000414368 PRR3P79522 188 aaKnown RBP4.23□□□□□ -1.73
LINC00343-201ENST00000414368 ADAMTSL4-AS1Q5T5F5 129 aa4.23□□□□□ -1.73
LINC00343-201ENST00000414368 PCP2Q8IVA1 136 aa4.23□□□□□ -1.73
LINC00343-201ENST00000414368 C7orf33Q8WU49 177 aa4.23□□□□□ -1.73
LINC00343-201ENST00000414368 HNRNPA3P51991 378 aaKnown RBP4.22□□□□□ -1.73
LINC00343-201ENST00000414368 RPL37AP8A6NKH3 93 aa4.21□□□□□ -1.74
LINC00343-201ENST00000414368 LINC00587B1AMM8 73 aa4.21□□□□□ -1.74
LINC00343-201ENST00000414368 HSBP1L1C9JCN9 74 aa4.21□□□□□ -1.74
LINC00343-201ENST00000414368 AKR1D1P51857 326 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms