RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 C18orf32Q8TCD1 76 aa7.32□□□□□ -1.24
PTPRN-203ENST00000412847 PLEKHB2Q96CS7 222 aa7.32□□□□□ -1.24
PTPRN-203ENST00000412847 LINC01549A6NIU2 74 aa7.31□□□□□ -1.24
PTPRN-203ENST00000412847 FA2HQ7L5A8 372 aa7.31□□□□□ -1.24
PTPRN-203ENST00000412847 C4orf48Q5BLP8 95 aa7.3□□□□□ -1.24
PTPRN-203ENST00000412847 BAGE3Q86Y29 109 aa7.3□□□□□ -1.24
PTPRN-203ENST00000412847 IGLV5-45A0A087WSX0 123 aa7.29□□□□□ -1.24
PTPRN-203ENST00000412847 TINCRA0A1B0GVN0 87 aa7.29□□□□□ -1.24
PTPRN-203ENST00000412847 M0R378 163 aa7.29□□□□□ -1.24
PTPRN-203ENST00000412847 ATP5LO75964 103 aa7.29□□□□□ -1.24
PTPRN-203ENST00000412847 SPINK8P0C7L1 97 aa7.29□□□□□ -1.24
PTPRN-203ENST00000412847 LINC00614P0C842 121 aa7.29□□□□□ -1.24
PTPRN-203ENST00000412847 VPREB1P12018 145 aa7.29□□□□□ -1.24
PTPRN-203ENST00000412847 TOMM6Q96B49 74 aa7.29□□□□□ -1.24
PTPRN-203ENST00000412847 CHCHD1Q96BP2 118 aaKnown RBP7.29□□□□□ -1.24
PTPRN-203ENST00000412847 HIGD2AQ9BW72 106 aa7.29□□□□□ -1.24
PTPRN-203ENST00000412847 LINC01546A6NGU7 62 aa7.28□□□□□ -1.24
PTPRN-203ENST00000412847 HIST1H2BKO60814 126 aa7.28□□□□□ -1.24
PTPRN-203ENST00000412847 HIST1H2BJP06899 126 aa7.28□□□□□ -1.24
PTPRN-203ENST00000412847 HIST1H2BOP23527 126 aa7.28□□□□□ -1.24
PTPRN-203ENST00000412847 HIST1H2BBP33778 126 aa7.28□□□□□ -1.24
PTPRN-203ENST00000412847 PFN2P35080 140 aa7.28□□□□□ -1.24
PTPRN-203ENST00000412847 HIST1H2BDP58876 126 aa7.28□□□□□ -1.24
PTPRN-203ENST00000412847 HIST1H2BCP62807 126 aa7.28□□□□□ -1.24
PTPRN-203ENST00000412847 HIST2H2BEQ16778 126 aa7.28□□□□□ -1.24
PTPRN-203ENST00000412847 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.28□□□□□ -1.24
PTPRN-203ENST00000412847 HIST1H2BHQ93079 126 aa7.28□□□□□ -1.24
PTPRN-203ENST00000412847 SPRR4Q96PI1 79 aa7.28□□□□□ -1.24
PTPRN-203ENST00000412847 HIST1H2BNQ99877 126 aa7.28□□□□□ -1.24
PTPRN-203ENST00000412847 HIST1H2BMQ99879 126 aa7.28□□□□□ -1.24
PTPRN-203ENST00000412847 RPL24P83731 157 aaKnown RBP7.27□□□□□ -1.25
PTPRN-203ENST00000412847 ERASQ7Z444 233 aa7.27□□□□□ -1.25
PTPRN-203ENST00000412847 HSBP1O75506 76 aa7.26□□□□□ -1.25
PTPRN-203ENST00000412847 DAND5Q8N907 189 aa7.26□□□□□ -1.25
PTPRN-203ENST00000412847 Q8NBF4 154 aa7.26□□□□□ -1.25
PTPRN-203ENST00000412847 SCGB3A1Q96QR1 104 aa7.26□□□□□ -1.25
PTPRN-203ENST00000412847 SND1-IT1Q9HBX3 110 aa7.25□□□□□ -1.25
PTPRN-203ENST00000412847 ZNF706Q9Y5V0 76 aaPredicted RBP7.25□□□□□ -1.25
PTPRN-203ENST00000412847 HBDP02042 147 aa7.24□□□□□ -1.25
PTPRN-203ENST00000412847 URB1-AS1Q96HZ7 61 aa7.24□□□□□ -1.25
PTPRN-203ENST00000412847 H3BRM9 83 aa7.23□□□□□ -1.25
PTPRN-203ENST00000412847 SERF1AO75920 110 aa7.23□□□□□ -1.25
PTPRN-203ENST00000412847 SPINK1P00995 79 aa7.23□□□□□ -1.25
PTPRN-203ENST00000412847 COA6Q5JTJ3 125 aaKnown RBP7.23□□□□□ -1.25
PTPRN-203ENST00000412847 NDUFA12Q9UI09 145 aa7.23□□□□□ -1.25
PTPRN-203ENST00000412847 ERG28Q9UKR5 140 aa7.23□□□□□ -1.25
PTPRN-203ENST00000412847 S100A6P06703 90 aa7.22□□□□□ -1.25
PTPRN-203ENST00000412847 Q8NDZ9 215 aa7.22□□□□□ -1.25
PTPRN-203ENST00000412847 CST9LQ9H4G1 147 aa7.22□□□□□ -1.25
PTPRN-203ENST00000412847 NDUFA6P56556 154 aa7.21□□□□□ -1.26
PTPRN-203ENST00000412847 PMVKQ15126 192 aa7.21□□□□□ -1.26
PTPRN-203ENST00000412847 LCE2CQ5TA81 110 aa7.21□□□□□ -1.26
PTPRN-203ENST00000412847 COX17Q14061 63 aa7.2□□□□□ -1.26
PTPRN-203ENST00000412847 FAM19A2Q8N3H0 131 aa7.2□□□□□ -1.26
PTPRN-203ENST00000412847 IGLV5-39A0A0G2JS06 123 aa7.19□□□□□ -1.26
PTPRN-203ENST00000412847 XP32Q5T750 250 aa7.19□□□□□ -1.26
PTPRN-203ENST00000412847 A0A096LNJ9 63 aa7.18□□□□□ -1.26
PTPRN-203ENST00000412847 LEPROTL1O95214 131 aa7.18□□□□□ -1.26
PTPRN-203ENST00000412847 LINC00310P59036 64 aa7.18□□□□□ -1.26
PTPRN-203ENST00000412847 PMCHL1Q16048 86 aa7.18□□□□□ -1.26
PTPRN-203ENST00000412847 ZNF625Q96I27 306 aaPredicted RBP7.18□□□□□ -1.26
PTPRN-203ENST00000412847 HSPB8Q9UJY1 196 aa7.18□□□□□ -1.26
PTPRN-203ENST00000412847 CFC1BP0CG36 223 aa7.17□□□□□ -1.26
PTPRN-203ENST00000412847 IGLC3P0DOY3 106 aa7.17□□□□□ -1.26
PTPRN-203ENST00000412847 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
PTPRN-203ENST00000412847 Q8N377 158 aa7.17□□□□□ -1.26
PTPRN-203ENST00000412847 PRYO14603 147 aa7.16□□□□□ -1.26
PTPRN-203ENST00000412847 S100A2P29034 98 aa7.16□□□□□ -1.26
PTPRN-203ENST00000412847 MT1HP80294 61 aa7.16□□□□□ -1.26
PTPRN-203ENST00000412847 SMCR5Q8TEV8 140 aa7.16□□□□□ -1.26
PTPRN-203ENST00000412847 SLC25A20O43772 301 aa7.15□□□□□ -1.26
PTPRN-203ENST00000412847 ZNF22P17026 224 aaPredicted RBP7.15□□□□□ -1.26
PTPRN-203ENST00000412847 MOBPQ13875 183 aa7.15□□□□□ -1.26
PTPRN-203ENST00000412847 KRTAP19-2Q3LHN2 52 aa7.15□□□□□ -1.26
PTPRN-203ENST00000412847 LINC00483Q53H64 154 aa7.15□□□□□ -1.26
PTPRN-203ENST00000412847 SFTA2Q6UW10 78 aa7.15□□□□□ -1.26
PTPRN-203ENST00000412847 IFI27L1Q96BM0 104 aa7.15□□□□□ -1.26
PTPRN-203ENST00000412847 MAP1LC3CQ9BXW4 147 aa7.14□□□□□ -1.27
PTPRN-203ENST00000412847 IGLV9-49A0A0B4J1Y8 123 aa7.13□□□□□ -1.27
PTPRN-203ENST00000412847 TRAV12-1A0A0B4J245 112 aa7.13□□□□□ -1.27
PTPRN-203ENST00000412847 FABP4P15090 132 aa7.13□□□□□ -1.27
PTPRN-203ENST00000412847 SPRR1AP35321 89 aa7.13□□□□□ -1.27
PTPRN-203ENST00000412847 SNRPEP62304 92 aaKnown RBP7.13□□□□□ -1.27
PTPRN-203ENST00000412847 HIST3H2BBQ8N257 126 aa7.13□□□□□ -1.27
PTPRN-203ENST00000412847 ETDCA0A1B0GVM5 59 aa7.12□□□□□ -1.27
PTPRN-203ENST00000412847 C5orf52A6NGY3 159 aa7.12□□□□□ -1.27
PTPRN-203ENST00000412847 LINC00158P58513 81 aa7.12□□□□□ -1.27
PTPRN-203ENST00000412847 GAGE2AQ6NT46 116 aa7.12□□□□□ -1.27
PTPRN-203ENST00000412847 TMA7Q9Y2S6 64 aaKnown RBP7.12□□□□□ -1.27
PTPRN-203ENST00000412847 SSBP3-AS1Q7Z2R9 100 aa7.11□□□□□ -1.27
PTPRN-203ENST00000412847 A0A0U1RRA0 63 aa7.1□□□□□ -1.27
PTPRN-203ENST00000412847 KRTAP4-16G5E9R7 235 aaPredicted RBP7.1□□□□□ -1.27
PTPRN-203ENST00000412847 NCR3O14931 201 aa7.1□□□□□ -1.27
PTPRN-203ENST00000412847 LORP23490 312 aaPredicted RBP7.1□□□□□ -1.27
PTPRN-203ENST00000412847 AKR1D1P51857 326 aa7.1□□□□□ -1.27
PTPRN-203ENST00000412847 HIST1H2BLQ99880 126 aa7.1□□□□□ -1.27
PTPRN-203ENST00000412847 KCNQ1DNQ9H478 68 aa7.1□□□□□ -1.27
PTPRN-203ENST00000412847 CHTOPQ9Y3Y2 248 aaKnown RBP7.1□□□□□ -1.27
PTPRN-203ENST00000412847 SYS1-DBNDD2H3BUS1 97 aa7.09□□□□□ -1.27
PTPRN-203ENST00000412847 PET117Q6UWS5 81 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms