RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 LINC01545Q5VT33 79 aa4.77□□□□□ -1.65
CPSF4-202ENST00000412686 PSORS1C2Q9UIG4 136 aa4.77□□□□□ -1.65
CPSF4-202ENST00000412686 VPS13BQ7Z7G8 4022 aa4.77□□□□□ -1.65
CPSF4-202ENST00000412686 LEPROTO15243 131 aa4.76□□□□□ -1.65
CPSF4-202ENST00000412686 PET117Q6UWS5 81 aa4.76□□□□□ -1.65
CPSF4-202ENST00000412686 HIST3H2BBQ8N257 126 aa4.76□□□□□ -1.65
CPSF4-202ENST00000412686 Q8NDZ9 215 aa4.76□□□□□ -1.65
CPSF4-202ENST00000412686 SND1-IT1Q9HBX3 110 aa4.76□□□□□ -1.65
CPSF4-202ENST00000412686 NDUFA12Q9UI09 145 aa4.76□□□□□ -1.65
CPSF4-202ENST00000412686 C22orf24Q9Y442 160 aa4.76□□□□□ -1.65
CPSF4-202ENST00000412686 J3QQQ9 107 aa4.75□□□□□ -1.65
CPSF4-202ENST00000412686 SMIM13P0DJ93 91 aa4.75□□□□□ -1.65
CPSF4-202ENST00000412686 LINC00158P58513 81 aa4.75□□□□□ -1.65
CPSF4-202ENST00000412686 HERVK_113P61574 105 aa4.75□□□□□ -1.65
CPSF4-202ENST00000412686 UBE2BP63146 152 aa4.75□□□□□ -1.65
CPSF4-202ENST00000412686 MEIG1Q5JSS6 88 aa4.75□□□□□ -1.65
CPSF4-202ENST00000412686 C1orf137Q5JT78 98 aa4.75□□□□□ -1.65
CPSF4-202ENST00000412686 ATOH7Q8N100 152 aa4.75□□□□□ -1.65
CPSF4-202ENST00000412686 PLEKHB2Q96CS7 222 aa4.75□□□□□ -1.65
CPSF4-202ENST00000412686 MYCBP2O75592 4640 aa4.74□□□□□ -1.65
CPSF4-202ENST00000412686 FLG2Q5D862 2391 aaPredicted RBP4.74□□□□□ -1.65
CPSF4-202ENST00000412686 IGKV2D-26A0A0A0MRZ7 120 aa4.74□□□□□ -1.65
CPSF4-202ENST00000412686 GAGE10A6NGK3 116 aa4.74□□□□□ -1.65
CPSF4-202ENST00000412686 E9PLD3 99 aa4.74□□□□□ -1.65
CPSF4-202ENST00000412686 LGALS3P17931 250 aaKnown RBP4.74□□□□□ -1.65
CPSF4-202ENST00000412686 COX17Q14061 63 aa4.74□□□□□ -1.65
CPSF4-202ENST00000412686 SFTA2Q6UW10 78 aa4.74□□□□□ -1.65
CPSF4-202ENST00000412686 MIR7-3HGQ8N6C7 128 aa4.74□□□□□ -1.65
CPSF4-202ENST00000412686 HIST1H2BLQ99880 126 aa4.74□□□□□ -1.65
CPSF4-202ENST00000412686 TTTY13Q9BZ97 58 aa4.74□□□□□ -1.65
CPSF4-202ENST00000412686 PKHD1L1Q86WI1 4243 aa4.74□□□□□ -1.65
CPSF4-202ENST00000412686 MYMXA0A1B0GTQ4 84 aa4.73□□□□□ -1.65
CPSF4-202ENST00000412686 RPL37AP8A6NKH3 93 aa4.73□□□□□ -1.65
CPSF4-202ENST00000412686 S100A6P06703 90 aa4.73□□□□□ -1.65
CPSF4-202ENST00000412686 VPREB1P12018 145 aa4.73□□□□□ -1.65
CPSF4-202ENST00000412686 S100A2P29034 98 aa4.73□□□□□ -1.65
CPSF4-202ENST00000412686 SNRPEP62304 92 aaKnown RBP4.73□□□□□ -1.65
CPSF4-202ENST00000412686 HERV-K104P63124 156 aa4.73□□□□□ -1.65
CPSF4-202ENST00000412686 MRPL55Q7Z7F7 128 aaKnown RBP4.73□□□□□ -1.65
CPSF4-202ENST00000412686 DAND5Q8N907 189 aa4.73□□□□□ -1.65
CPSF4-202ENST00000412686 LINC00167Q96N53 147 aa4.73□□□□□ -1.65
CPSF4-202ENST00000412686 PLA2G2DQ9UNK4 145 aa4.73□□□□□ -1.65
CPSF4-202ENST00000412686 LRP1Q07954 4544 aaKnown RBP4.73□□□□□ -1.65
CPSF4-202ENST00000412686 FAT3Q8TDW7 4589 aa4.73□□□□□ -1.65
CPSF4-202ENST00000412686 IGLV5-37A0A075B6J1 123 aa4.72□□□□□ -1.65
CPSF4-202ENST00000412686 SRSF9Q13242 221 aaKnown RBP eCLIP4.72□□□□□ -1.65
CPSF4-202ENST00000412686 A0A0J9YXY3 114 aa4.71□□□□□ -1.66
CPSF4-202ENST00000412686 C20orf202A1L168 122 aa4.71□□□□□ -1.66
CPSF4-202ENST00000412686 IGLV7-43P04211 117 aa4.71□□□□□ -1.66
CPSF4-202ENST00000412686 NKAPP1Q8N9T2 125 aa4.71□□□□□ -1.66
CPSF4-202ENST00000412686 TP73-AS1Q9UF72 201 aa4.71□□□□□ -1.66
CPSF4-202ENST00000412686 SRRM2Q9UQ35 2752 aaKnown RBP4.71□□□□□ -1.66
CPSF4-202ENST00000412686 IGKV2-28A0A075B6P5 120 aa4.7□□□□□ -1.66
CPSF4-202ENST00000412686 C5orf52A6NGY3 159 aa4.7□□□□□ -1.66
CPSF4-202ENST00000412686 KRTAP29-1A8MX34 341 aaPredicted RBP4.7□□□□□ -1.66
CPSF4-202ENST00000412686 IGKV2D-28P01615 120 aa4.7□□□□□ -1.66
CPSF4-202ENST00000412686 NMUP48645 174 aa4.7□□□□□ -1.66
CPSF4-202ENST00000412686 NPC2P61916 151 aa4.7□□□□□ -1.66
CPSF4-202ENST00000412686 LBHQ53QV2 105 aaPredicted RBP4.7□□□□□ -1.66
CPSF4-202ENST00000412686 ADAMTSL4-AS1Q5T5F5 129 aa4.7□□□□□ -1.66
CPSF4-202ENST00000412686 SPINK6Q6UWN8 80 aa4.7□□□□□ -1.66
CPSF4-202ENST00000412686 SOSTDC1Q6X4U4 206 aa4.7□□□□□ -1.66
CPSF4-202ENST00000412686 BOD1L2Q8IYS8 172 aa4.7□□□□□ -1.66
CPSF4-202ENST00000412686 ZNF815PA8K554 130 aa4.69□□□□□ -1.66
CPSF4-202ENST00000412686 TMEM238C9JI98 176 aa4.69□□□□□ -1.66
CPSF4-202ENST00000412686 NCR3O14931 201 aa4.69□□□□□ -1.66
CPSF4-202ENST00000412686 RPL24P83731 157 aaKnown RBP4.69□□□□□ -1.66
CPSF4-202ENST00000412686 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
CPSF4-202ENST00000412686 LINC00587B1AMM8 73 aa4.68□□□□□ -1.66
CPSF4-202ENST00000412686 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
CPSF4-202ENST00000412686 PCP2Q8IVA1 136 aa4.68□□□□□ -1.66
CPSF4-202ENST00000412686 LITAFQ99732 161 aa4.68□□□□□ -1.66
CPSF4-202ENST00000412686 IGLV1-50A0A075B6I6 118 aa4.67□□□□□ -1.66
CPSF4-202ENST00000412686 BCE1O60756 84 aa4.67□□□□□ -1.66
CPSF4-202ENST00000412686 OXTP01178 125 aa4.67□□□□□ -1.66
CPSF4-202ENST00000412686 H0Y9J4 135 aa4.66□□□□□ -1.66
CPSF4-202ENST00000412686 M0R378 163 aa4.66□□□□□ -1.66
CPSF4-202ENST00000412686 ZNF861PO60384 105 aa4.66□□□□□ -1.66
CPSF4-202ENST00000412686 PRLHP81277 87 aa4.66□□□□□ -1.66
CPSF4-202ENST00000412686 TMEM126AQ9H061 195 aa4.66□□□□□ -1.66
CPSF4-202ENST00000412686 TMA7Q9Y2S6 64 aaKnown RBP4.66□□□□□ -1.66
CPSF4-202ENST00000412686 LOC107984156A0A0G2JMH3 177 aa4.65□□□□□ -1.67
CPSF4-202ENST00000412686 TRBV10-3A0A0K0K1G6 114 aa4.65□□□□□ -1.67
CPSF4-202ENST00000412686 SCGB1D1O95968 90 aa4.65□□□□□ -1.67
CPSF4-202ENST00000412686 REG3GQ6UW15 175 aa4.65□□□□□ -1.67
CPSF4-202ENST00000412686 FAM19A1Q7Z5A9 133 aa4.65□□□□□ -1.67
CPSF4-202ENST00000412686 KRTAP13-1Q8IUC0 172 aa4.65□□□□□ -1.67
CPSF4-202ENST00000412686 ARL17AQ8IVW1 177 aa4.65□□□□□ -1.67
CPSF4-202ENST00000412686 DIRC1Q969H9 104 aa4.65□□□□□ -1.67
CPSF4-202ENST00000412686 LINC01600Q96MT4 127 aa4.65□□□□□ -1.67
CPSF4-202ENST00000412686 MIEN1Q9BRT3 115 aa4.65□□□□□ -1.67
CPSF4-202ENST00000412686 TIMM17BO60830 172 aa4.64□□□□□ -1.67
CPSF4-202ENST00000412686 KRTAP1-4P0C5Y4 121 aa4.64□□□□□ -1.67
CPSF4-202ENST00000412686 UBE2AP49459 152 aa4.64□□□□□ -1.67
CPSF4-202ENST00000412686 SCGB1D4Q6XE38 83 aa4.64□□□□□ -1.67
CPSF4-202ENST00000412686 LINC00308Q8TCZ7 52 aa4.64□□□□□ -1.67
CPSF4-202ENST00000412686 KRTAP9-9Q9BYP9 154 aa4.64□□□□□ -1.67
CPSF4-202ENST00000412686 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
CPSF4-202ENST00000412686 RPL28P46779 137 aaKnown RBP4.63□□□□□ -1.67
CPSF4-202ENST00000412686 PRR26Q8N8Z3 221 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms