RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 LINC00310P59036 64 aa9.68□□□□□ -0.86
MRPL55-220ENST00000411464 PMCHL1Q16048 86 aa9.68□□□□□ -0.86
MRPL55-220ENST00000411464 ERASQ7Z444 233 aa9.68□□□□□ -0.86
MRPL55-220ENST00000411464 CHCHD1Q96BP2 118 aaKnown RBP9.68□□□□□ -0.86
MRPL55-220ENST00000411464 SCGB3A1Q96QR1 104 aa9.68□□□□□ -0.86
MRPL55-220ENST00000411464 IGKV2-28A0A075B6P5 120 aa9.67□□□□□ -0.86
MRPL55-220ENST00000411464 TINCRA0A1B0GVN0 87 aa9.67□□□□□ -0.86
MRPL55-220ENST00000411464 SERF1AO75920 110 aa9.67□□□□□ -0.86
MRPL55-220ENST00000411464 IGKV2D-28P01615 120 aa9.67□□□□□ -0.86
MRPL55-220ENST00000411464 CTAG1AP78358 180 aa9.67□□□□□ -0.86
MRPL55-220ENST00000411464 A0A096LNJ9 63 aa9.66□□□□□ -0.86
MRPL55-220ENST00000411464 IGLV5-45A0A087WSX0 123 aa9.64□□□□□ -0.87
MRPL55-220ENST00000411464 HSBP1O75506 76 aa9.64□□□□□ -0.87
MRPL55-220ENST00000411464 ATP5LO75964 103 aa9.64□□□□□ -0.87
MRPL55-220ENST00000411464 HBDP02042 147 aa9.64□□□□□ -0.87
MRPL55-220ENST00000411464 SPINK8P0C7L1 97 aa9.64□□□□□ -0.87
MRPL55-220ENST00000411464 NDUFA6P56556 154 aa9.64□□□□□ -0.87
MRPL55-220ENST00000411464 FAM19A1Q7Z5A9 133 aa9.64□□□□□ -0.87
MRPL55-220ENST00000411464 PRLHP81277 87 aa9.63□□□□□ -0.87
MRPL55-220ENST00000411464 FAM19A2Q8N3H0 131 aa9.63□□□□□ -0.87
MRPL55-220ENST00000411464 PPDPFQ9H3Y8 114 aa9.63□□□□□ -0.87
MRPL55-220ENST00000411464 LINC01549A6NIU2 74 aa9.62□□□□□ -0.87
MRPL55-220ENST00000411464 TMEM126AQ9H061 195 aa9.62□□□□□ -0.87
MRPL55-220ENST00000411464 CST9LQ9H4G1 147 aa9.62□□□□□ -0.87
MRPL55-220ENST00000411464 PFN2P35080 140 aa9.61□□□□□ -0.87
MRPL55-220ENST00000411464 H3BRM9 83 aa9.6□□□□□ -0.87
MRPL55-220ENST00000411464 COA6Q5JTJ3 125 aaKnown RBP9.6□□□□□ -0.87
MRPL55-220ENST00000411464 TMEM238C9JI98 176 aa9.59□□□□□ -0.87
MRPL55-220ENST00000411464 PLEKHB2Q96CS7 222 aa9.59□□□□□ -0.87
MRPL55-220ENST00000411464 RPL24P83731 157 aaKnown RBP9.58□□□□□ -0.88
MRPL55-220ENST00000411464 PMVKQ15126 192 aa9.58□□□□□ -0.88
MRPL55-220ENST00000411464 SPAG11AQ6PDA7 123 aa9.58□□□□□ -0.88
MRPL55-220ENST00000411464 VPREB1P12018 145 aa9.57□□□□□ -0.88
MRPL55-220ENST00000411464 C3orf22Q8N5N4 141 aa9.57□□□□□ -0.88
MRPL55-220ENST00000411464 SND1-IT1Q9HBX3 110 aa9.57□□□□□ -0.88
MRPL55-220ENST00000411464 M0R378 163 aa9.56□□□□□ -0.88
MRPL55-220ENST00000411464 LEPROTL1O95214 131 aa9.56□□□□□ -0.88
MRPL55-220ENST00000411464 FABP4P15090 132 aa9.56□□□□□ -0.88
MRPL55-220ENST00000411464 S100A6P06703 90 aa9.55□□□□□ -0.88
MRPL55-220ENST00000411464 C4orf48Q5BLP8 95 aa9.55□□□□□ -0.88
MRPL55-220ENST00000411464 LINC00337Q8N6G1 96 aa9.55□□□□□ -0.88
MRPL55-220ENST00000411464 IFI27L1Q96BM0 104 aa9.55□□□□□ -0.88
MRPL55-220ENST00000411464 HIGD2AQ9BW72 106 aa9.55□□□□□ -0.88
MRPL55-220ENST00000411464 COX17Q14061 63 aa9.54□□□□□ -0.88
MRPL55-220ENST00000411464 FP248Q71RG6 208 aaPredicted RBP9.54□□□□□ -0.88
MRPL55-220ENST00000411464 ERG28Q9UKR5 140 aa9.54□□□□□ -0.88
MRPL55-220ENST00000411464 HSPB8Q9UJY1 196 aa9.53□□□□□ -0.88
MRPL55-220ENST00000411464 IGLV5-39A0A0G2JS06 123 aa9.52□□□□□ -0.89
MRPL55-220ENST00000411464 HIST3H2BBQ8N257 126 aa9.52□□□□□ -0.89
MRPL55-220ENST00000411464 SNRPEP62304 92 aaKnown RBP9.51□□□□□ -0.89
MRPL55-220ENST00000411464 ZNF625Q96I27 306 aaPredicted RBP9.51□□□□□ -0.89
MRPL55-220ENST00000411464 TMA7Q9Y2S6 64 aaKnown RBP9.51□□□□□ -0.89
MRPL55-220ENST00000411464 H0Y8G0 127 aa9.5□□□□□ -0.89
MRPL55-220ENST00000411464 IGLC3P0DOY3 106 aa9.5□□□□□ -0.89
MRPL55-220ENST00000411464 LINC01547P58512 204 aaPredicted RBP9.5□□□□□ -0.89
MRPL55-220ENST00000411464 SPRR4Q96PI1 79 aa9.5□□□□□ -0.89
MRPL55-220ENST00000411464 MUC17Q685J3 4493 aa9.5□□□□□ -0.89
MRPL55-220ENST00000411464 C5orf52A6NGY3 159 aa9.49□□□□□ -0.89
MRPL55-220ENST00000411464 ZNF706Q9Y5V0 76 aaPredicted RBP9.49□□□□□ -0.89
MRPL55-220ENST00000411464 TRAV12-1A0A0B4J245 112 aa9.48□□□□□ -0.89
MRPL55-220ENST00000411464 S100A2P29034 98 aa9.48□□□□□ -0.89
MRPL55-220ENST00000411464 SFTA2Q6UW10 78 aa9.48□□□□□ -0.89
MRPL55-220ENST00000411464 Q8NDZ9 215 aa9.48□□□□□ -0.89
MRPL55-220ENST00000411464 MAP1LC3CQ9BXW4 147 aa9.48□□□□□ -0.89
MRPL55-220ENST00000411464 CHTOPQ9Y3Y2 248 aaKnown RBP9.48□□□□□ -0.89
MRPL55-220ENST00000411464 ZNF22P17026 224 aaPredicted RBP9.47□□□□□ -0.89
MRPL55-220ENST00000411464 KRTAP13-3Q3SY46 172 aa9.47□□□□□ -0.89
MRPL55-220ENST00000411464 ASB16-AS1Q495Z4 193 aa9.47□□□□□ -0.89
MRPL55-220ENST00000411464 HIST1H2BLQ99880 126 aa9.47□□□□□ -0.89
MRPL55-220ENST00000411464 DAND5Q8N907 189 aa9.46□□□□□ -0.9
MRPL55-220ENST00000411464 Q8NBF4 154 aa9.46□□□□□ -0.9
MRPL55-220ENST00000411464 C3orf79P0CE67 100 aa9.45□□□□□ -0.9
MRPL55-220ENST00000411464 LINC00158P58513 81 aa9.45□□□□□ -0.9
MRPL55-220ENST00000411464 SYS1-DBNDD2H3BUS1 97 aa9.44□□□□□ -0.9
MRPL55-220ENST00000411464 SEC61BP60468 96 aaKnown RBP9.44□□□□□ -0.9
MRPL55-220ENST00000411464 KRTDAPP60985 99 aa9.44□□□□□ -0.9
MRPL55-220ENST00000411464 C11orf86A6NJI1 115 aa9.43□□□□□ -0.9
MRPL55-220ENST00000411464 SPINK1P00995 79 aa9.43□□□□□ -0.9
MRPL55-220ENST00000411464 PMCHL2Q9BQD1 86 aa9.43□□□□□ -0.9
MRPL55-220ENST00000411464 TMEM170BQ5T4T1 132 aa9.42□□□□□ -0.9
MRPL55-220ENST00000411464 PET117Q6UWS5 81 aa9.42□□□□□ -0.9
MRPL55-220ENST00000411464 A0A0U1RRA0 63 aa9.4□□□□□ -0.9
MRPL55-220ENST00000411464 PRYO14603 147 aa9.4□□□□□ -0.9
MRPL55-220ENST00000411464 LINC01545Q5VT33 79 aa9.4□□□□□ -0.9
MRPL55-220ENST00000411464 SMCR5Q8TEV8 140 aa9.4□□□□□ -0.9
MRPL55-220ENST00000411464 NDUFA12Q9UI09 145 aa9.4□□□□□ -0.9
MRPL55-220ENST00000411464 DPM2O94777 84 aa9.39□□□□□ -0.91
MRPL55-220ENST00000411464 IGKCP01834 107 aa9.38□□□□□ -0.91
MRPL55-220ENST00000411464 PLNP26678 52 aa9.38□□□□□ -0.91
MRPL55-220ENST00000411464 KRTAP4-1Q9BYQ7 146 aa9.38□□□□□ -0.91
MRPL55-220ENST00000411464 ETDCA0A1B0GVM5 59 aa9.37□□□□□ -0.91
MRPL55-220ENST00000411464 BOD1L2Q8IYS8 172 aa9.37□□□□□ -0.91
MRPL55-220ENST00000411464 KCNQ1DNQ9H478 68 aa9.37□□□□□ -0.91
MRPL55-220ENST00000411464 C20orf202A1L168 122 aa9.36□□□□□ -0.91
MRPL55-220ENST00000411464 SPRR1AP35321 89 aa9.36□□□□□ -0.91
MRPL55-220ENST00000411464 TMEM223A0PJW6 202 aa9.35□□□□□ -0.91
MRPL55-220ENST00000411464 NCR3O14931 201 aa9.35□□□□□ -0.91
MRPL55-220ENST00000411464 LINC00483Q53H64 154 aa9.35□□□□□ -0.91
MRPL55-220ENST00000411464 GAGE2AQ6NT46 116 aa9.35□□□□□ -0.91
MRPL55-220ENST00000411464 SMIM13P0DJ93 91 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms