RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 PLA2G2DQ9UNK4 145 aa14.73□□□□□ -0.05
UBE2E3-202ENST00000410062 S100A6P06703 90 aa14.72□□□□□ -0.05
UBE2E3-202ENST00000410062 LGALS3P17931 250 aaKnown RBP14.71□□□□□ -0.05
UBE2E3-202ENST00000410062 LRP1Q07954 4544 aaKnown RBP14.7□□□□□ -0.06
UBE2E3-202ENST00000410062 E9PLD3 99 aa14.7□□□□□ -0.06
UBE2E3-202ENST00000410062 S100A2P29034 98 aa14.7□□□□□ -0.06
UBE2E3-202ENST00000410062 C1orf137Q5JT78 98 aa14.7□□□□□ -0.06
UBE2E3-202ENST00000410062 MRPL55Q7Z7F7 128 aaKnown RBP14.69□□□□□ -0.06
UBE2E3-202ENST00000410062 LBHQ53QV2 105 aaPredicted RBP14.68□□□□□ -0.06
UBE2E3-202ENST00000410062 HIST1H2BLQ99880 126 aa14.68□□□□□ -0.06
UBE2E3-202ENST00000410062 TP73-AS1Q9UF72 201 aa14.68□□□□□ -0.06
UBE2E3-202ENST00000410062 C20orf202A1L168 122 aa14.67□□□□□ -0.06
UBE2E3-202ENST00000410062 NMUP48645 174 aa14.67□□□□□ -0.06
UBE2E3-202ENST00000410062 IGLV5-37A0A075B6J1 123 aa14.66□□□□□ -0.06
UBE2E3-202ENST00000410062 NKAPP1Q8N9T2 125 aa14.66□□□□□ -0.06
UBE2E3-202ENST00000410062 GAGE10A6NGK3 116 aa14.65□□□□□ -0.06
UBE2E3-202ENST00000410062 LINC00587B1AMM8 73 aa14.65□□□□□ -0.06
UBE2E3-202ENST00000410062 SNRPEP62304 92 aaKnown RBP14.65□□□□□ -0.06
UBE2E3-202ENST00000410062 MIR7-3HGQ8N6C7 128 aa14.65□□□□□ -0.06
UBE2E3-202ENST00000410062 LINC00167Q96N53 147 aa14.65□□□□□ -0.06
UBE2E3-202ENST00000410062 FAT3Q8TDW7 4589 aa14.65□□□□□ -0.06
UBE2E3-202ENST00000410062 Q8NDZ9 215 aa14.64□□□□□ -0.07
UBE2E3-202ENST00000410062 VPREB1P12018 145 aa14.64□□□□□ -0.07
UBE2E3-202ENST00000410062 SRSF9Q13242 221 aaKnown RBP eCLIP14.64□□□□□ -0.07
UBE2E3-202ENST00000410062 RPL37AP8A6NKH3 93 aa14.63□□□□□ -0.07
UBE2E3-202ENST00000410062 ATOH7Q8N100 152 aa14.63□□□□□ -0.07
UBE2E3-202ENST00000410062 S100A12P80511 92 aa14.62□□□□□ -0.07
UBE2E3-202ENST00000410062 RPL24P83731 157 aaKnown RBP14.62□□□□□ -0.07
UBE2E3-202ENST00000410062 IGKV2D-26A0A0A0MRZ7 120 aa14.61□□□□□ -0.07
UBE2E3-202ENST00000410062 KRTAP29-1A8MX34 341 aaPredicted RBP14.61□□□□□ -0.07
UBE2E3-202ENST00000410062 SPINK6Q6UWN8 80 aa14.61□□□□□ -0.07
UBE2E3-202ENST00000410062 DAND5Q8N907 189 aa14.61□□□□□ -0.07
UBE2E3-202ENST00000410062 IGLV7-43P04211 117 aa14.6□□□□□ -0.07
UBE2E3-202ENST00000410062 DMBT1Q9UGM3 2413 aaPredicted RBP14.59□□□□□ -0.07
UBE2E3-202ENST00000410062 A0A0J9YXY3 114 aa14.58□□□□□ -0.08
UBE2E3-202ENST00000410062 C5orf52A6NGY3 159 aa14.58□□□□□ -0.08
UBE2E3-202ENST00000410062 J3QL48 77 aa14.57□□□□□ -0.08
UBE2E3-202ENST00000410062 OXTP01178 125 aa14.57□□□□□ -0.08
UBE2E3-202ENST00000410062 BOD1L2Q8IYS8 172 aa14.57□□□□□ -0.08
UBE2E3-202ENST00000410062 TTTY13Q9BZ97 58 aa14.57□□□□□ -0.08
UBE2E3-202ENST00000410062 IGKV2-28A0A075B6P5 120 aa14.56□□□□□ -0.08
UBE2E3-202ENST00000410062 IGKV2D-28P01615 120 aa14.56□□□□□ -0.08
UBE2E3-202ENST00000410062 ANKRD39Q53RE8 183 aa14.56□□□□□ -0.08
UBE2E3-202ENST00000410062 ZNF815PA8K554 130 aa14.54□□□□□ -0.08
UBE2E3-202ENST00000410062 AKR1D1P51857 326 aa14.54□□□□□ -0.08
UBE2E3-202ENST00000410062 IGLV1-50A0A075B6I6 118 aa14.52□□□□□ -0.08
UBE2E3-202ENST00000410062 ADAMTSL4-AS1Q5T5F5 129 aa14.52□□□□□ -0.08
UBE2E3-202ENST00000410062 HERC1Q15751 4861 aa14.5□□□□□ -0.09
UBE2E3-202ENST00000410062 NCR3O14931 201 aa14.5□□□□□ -0.09
UBE2E3-202ENST00000410062 BCE1O60756 84 aa14.5□□□□□ -0.09
UBE2E3-202ENST00000410062 LOC107984156A0A0G2JMH3 177 aa14.49□□□□□ -0.09
UBE2E3-202ENST00000410062 M0R378 163 aa14.49□□□□□ -0.09
UBE2E3-202ENST00000410062 NPC2P61916 151 aa14.49□□□□□ -0.09
UBE2E3-202ENST00000410062 ARL17AQ8IVW1 177 aa14.49□□□□□ -0.09
UBE2E3-202ENST00000410062 REG3GQ6UW15 175 aa14.48□□□□□ -0.09
UBE2E3-202ENST00000410062 DIRC1Q969H9 104 aa14.48□□□□□ -0.09
UBE2E3-202ENST00000410062 MIEN1Q9BRT3 115 aa14.48□□□□□ -0.09
UBE2E3-202ENST00000410062 LITAFQ99732 161 aa14.47□□□□□ -0.09
UBE2E3-202ENST00000410062 TMEM238C9JI98 176 aa14.47□□□□□ -0.09
UBE2E3-202ENST00000410062 ZNF861PO60384 105 aa14.47□□□□□ -0.09
UBE2E3-202ENST00000410062 EIF4EBP3O60516 100 aaPredicted RBP14.47□□□□□ -0.09
UBE2E3-202ENST00000410062 H0Y9J4 135 aa14.46□□□□□ -0.09
UBE2E3-202ENST00000410062 SOSTDC1Q6X4U4 206 aa14.46□□□□□ -0.09
UBE2E3-202ENST00000410062 LINC00518Q8N0U6 118 aa14.46□□□□□ -0.09
UBE2E3-202ENST00000410062 TIMM17BO60830 172 aa14.45□□□□□ -0.1
UBE2E3-202ENST00000410062 SCGB1D1O95968 90 aa14.45□□□□□ -0.1
UBE2E3-202ENST00000410062 PCP2Q8IVA1 136 aa14.45□□□□□ -0.1
UBE2E3-202ENST00000410062 TMEM126AQ9H061 195 aa14.44□□□□□ -0.1
UBE2E3-202ENST00000410062 LINC01600Q96MT4 127 aa14.43□□□□□ -0.1
UBE2E3-202ENST00000410062 MT1HL1P0DM35 61 aa14.43□□□□□ -0.1
UBE2E3-202ENST00000410062 SCGB1D4Q6XE38 83 aa14.43□□□□□ -0.1
UBE2E3-202ENST00000410062 RPL28P46779 137 aaKnown RBP14.42□□□□□ -0.1
UBE2E3-202ENST00000410062 HSBP1L1C9JCN9 74 aa14.41□□□□□ -0.1
UBE2E3-202ENST00000410062 UBE2AP49459 152 aa14.4□□□□□ -0.1
UBE2E3-202ENST00000410062 LINC00308Q8TCZ7 52 aa14.4□□□□□ -0.1
UBE2E3-202ENST00000410062 TRBV10-3A0A0K0K1G6 114 aa14.39□□□□□ -0.11
UBE2E3-202ENST00000410062 NDUFC2O95298 119 aa14.39□□□□□ -0.11
UBE2E3-202ENST00000410062 FAM19A1Q7Z5A9 133 aa14.39□□□□□ -0.11
UBE2E3-202ENST00000410062 KRTAP13-1Q8IUC0 172 aa14.39□□□□□ -0.11
UBE2E3-202ENST00000410062 SPANXB1Q9NS25 103 aaPredicted RBP14.39□□□□□ -0.11
UBE2E3-202ENST00000410062 TNXBP22105 4242 aa14.37□□□□□ -0.11
UBE2E3-202ENST00000410062 TRBV10-2A0A0K0K1G8 114 aa14.37□□□□□ -0.11
UBE2E3-202ENST00000410062 PRLHP81277 87 aa14.37□□□□□ -0.11
UBE2E3-202ENST00000410062 PRYO14603 147 aa14.34□□□□□ -0.11
UBE2E3-202ENST00000410062 DDTP30046 118 aa14.34□□□□□ -0.11
UBE2E3-202ENST00000410062 KCNQ1DNQ9H478 68 aa14.34□□□□□ -0.11
UBE2E3-202ENST00000410062 KRTAP1-4P0C5Y4 121 aa14.34□□□□□ -0.11
UBE2E3-202ENST00000410062 SPANXDQ9BXN6 97 aa14.34□□□□□ -0.11
UBE2E3-202ENST00000410062 SPANXCQ9NY87 97 aa14.34□□□□□ -0.11
UBE2E3-202ENST00000410062 KRTAP10-8P60410 259 aa14.31□□□□□ -0.12
UBE2E3-202ENST00000410062 S100A7L2Q5SY68 101 aa14.31□□□□□ -0.12
UBE2E3-202ENST00000410062 IGLV6-57P01721 117 aa14.3□□□□□ -0.12
UBE2E3-202ENST00000410062 SPRR1AP35321 89 aa14.3□□□□□ -0.12
UBE2E3-202ENST00000410062 PRR26Q8N8Z3 221 aa14.29□□□□□ -0.12
UBE2E3-202ENST00000410062 PCP4L1A6NKN8 68 aa14.28□□□□□ -0.12
UBE2E3-202ENST00000410062 LINC00337Q8N6G1 96 aa14.27□□□□□ -0.12
UBE2E3-202ENST00000410062 KRTAP4-16G5E9R7 235 aaPredicted RBP14.26□□□□□ -0.13
UBE2E3-202ENST00000410062 JOSD1Q15040 202 aaPredicted RBP14.26□□□□□ -0.13
UBE2E3-202ENST00000410062 ETDCA0A1B0GVM5 59 aa14.26□□□□□ -0.13
UBE2E3-202ENST00000410062 Q6ZVH6 145 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms