RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 DMBT1Q9UGM3 2413 aaPredicted RBP6.75□□□□□ -1.33
CHMP3-205ENST00000409810 C20orf202A1L168 122 aa6.74□□□□□ -1.33
CHMP3-205ENST00000409810 NMUP48645 174 aa6.74□□□□□ -1.33
CHMP3-205ENST00000409810 RPL24P83731 157 aaKnown RBP6.74□□□□□ -1.33
CHMP3-205ENST00000409810 LINC01545Q5VT33 79 aa6.74□□□□□ -1.33
CHMP3-205ENST00000409810 SND1-IT1Q9HBX3 110 aa6.74□□□□□ -1.33
CHMP3-205ENST00000409810 IGLV5-37A0A075B6J1 123 aa6.73□□□□□ -1.33
CHMP3-205ENST00000409810 J3QQQ9 107 aa6.73□□□□□ -1.33
CHMP3-205ENST00000409810 S100A6P06703 90 aa6.73□□□□□ -1.33
CHMP3-205ENST00000409810 C3orf79P0CE67 100 aa6.73□□□□□ -1.33
CHMP3-205ENST00000409810 KRTDAPP60985 99 aa6.73□□□□□ -1.33
CHMP3-205ENST00000409810 E9PLD3 99 aa6.72□□□□□ -1.33
CHMP3-205ENST00000409810 S100A2P29034 98 aa6.72□□□□□ -1.33
CHMP3-205ENST00000409810 AKR1D1P51857 326 aa6.72□□□□□ -1.33
CHMP3-205ENST00000409810 FAT3Q8TDW7 4589 aa6.71□□□□□ -1.33
CHMP3-205ENST00000409810 A0A0U1RRA0 63 aa6.71□□□□□ -1.34
CHMP3-205ENST00000409810 IGLV7-43P04211 117 aa6.71□□□□□ -1.34
CHMP3-205ENST00000409810 SMIM13P0DJ93 91 aa6.71□□□□□ -1.34
CHMP3-205ENST00000409810 TSPEAR-AS2P59090 65 aa6.71□□□□□ -1.34
CHMP3-205ENST00000409810 REG3GQ6UW15 175 aa6.71□□□□□ -1.34
CHMP3-205ENST00000409810 VPREB1P12018 145 aa6.7□□□□□ -1.34
CHMP3-205ENST00000409810 SRSF9Q13242 221 aaKnown RBP eCLIP6.7□□□□□ -1.34
CHMP3-205ENST00000409810 MIR7-3HGQ8N6C7 128 aa6.7□□□□□ -1.34
CHMP3-205ENST00000409810 LINC00167Q96N53 147 aa6.7□□□□□ -1.34
CHMP3-205ENST00000409810 LRP1Q07954 4544 aaKnown RBP6.69□□□□□ -1.34
CHMP3-205ENST00000409810 KRTAP11-1Q8IUC1 163 aa6.69□□□□□ -1.34
CHMP3-205ENST00000409810 DIRC1Q969H9 104 aa6.69□□□□□ -1.34
CHMP3-205ENST00000409810 GAGE10A6NGK3 116 aa6.68□□□□□ -1.34
CHMP3-205ENST00000409810 HIST3H2BBQ8N257 126 aa6.68□□□□□ -1.34
CHMP3-205ENST00000409810 RPL37AP8A6NKH3 93 aa6.67□□□□□ -1.34
CHMP3-205ENST00000409810 MIEN1Q9BRT3 115 aa6.67□□□□□ -1.34
CHMP3-205ENST00000409810 BCE1O60756 84 aa6.66□□□□□ -1.34
CHMP3-205ENST00000409810 BOD1L2Q8IYS8 172 aa6.66□□□□□ -1.34
CHMP3-205ENST00000409810 HIST1H2BLQ99880 126 aa6.66□□□□□ -1.34
CHMP3-205ENST00000409810 IGKV2-28A0A075B6P5 120 aa6.65□□□□□ -1.34
CHMP3-205ENST00000409810 IGKV2D-26A0A0A0MRZ7 120 aa6.65□□□□□ -1.34
CHMP3-205ENST00000409810 A0A0J9YXY3 114 aa6.65□□□□□ -1.34
CHMP3-205ENST00000409810 ZNF815PA8K554 130 aa6.65□□□□□ -1.34
CHMP3-205ENST00000409810 H0Y9J4 135 aa6.65□□□□□ -1.34
CHMP3-205ENST00000409810 M0R378 163 aa6.65□□□□□ -1.34
CHMP3-205ENST00000409810 ZNF861PO60384 105 aa6.65□□□□□ -1.34
CHMP3-205ENST00000409810 IGKV2D-28P01615 120 aa6.65□□□□□ -1.34
CHMP3-205ENST00000409810 RPL28P46779 137 aaKnown RBP6.65□□□□□ -1.34
CHMP3-205ENST00000409810 IGLV1-50A0A075B6I6 118 aa6.64□□□□□ -1.35
CHMP3-205ENST00000409810 LOC107984156A0A0G2JMH3 177 aa6.64□□□□□ -1.35
CHMP3-205ENST00000409810 UBE2AP49459 152 aa6.64□□□□□ -1.35
CHMP3-205ENST00000409810 SNRPEP62304 92 aaKnown RBP6.64□□□□□ -1.35
CHMP3-205ENST00000409810 ARL17AQ8IVW1 177 aa6.64□□□□□ -1.35
CHMP3-205ENST00000409810 DAND5Q8N907 189 aa6.64□□□□□ -1.35
CHMP3-205ENST00000409810 LINC01600Q96MT4 127 aa6.64□□□□□ -1.35
CHMP3-205ENST00000409810 NCR3O14931 201 aa6.63□□□□□ -1.35
CHMP3-205ENST00000409810 TIMM17BO60830 172 aa6.63□□□□□ -1.35
CHMP3-205ENST00000409810 S100A12P80511 92 aa6.63□□□□□ -1.35
CHMP3-205ENST00000409810 Q8NDZ9 215 aa6.63□□□□□ -1.35
CHMP3-205ENST00000409810 HSBP1L1C9JCN9 74 aa6.62□□□□□ -1.35
CHMP3-205ENST00000409810 ATOH7Q8N100 152 aa6.62□□□□□ -1.35
CHMP3-205ENST00000409810 TRBV10-2A0A0K0K1G8 114 aa6.61□□□□□ -1.35
CHMP3-205ENST00000409810 PRYO14603 147 aa6.61□□□□□ -1.35
CHMP3-205ENST00000409810 NDUFC2O95298 119 aa6.61□□□□□ -1.35
CHMP3-205ENST00000409810 SCGB1D4Q6XE38 83 aa6.61□□□□□ -1.35
CHMP3-205ENST00000409810 TMEM126AQ9H061 195 aa6.61□□□□□ -1.35
CHMP3-205ENST00000409810 SPANXB1Q9NS25 103 aaPredicted RBP6.61□□□□□ -1.35
CHMP3-205ENST00000409810 TNXBP22105 4242 aa6.61□□□□□ -1.35
CHMP3-205ENST00000409810 C5orf52A6NGY3 159 aa6.6□□□□□ -1.35
CHMP3-205ENST00000409810 MT1HL1P0DM35 61 aa6.6□□□□□ -1.35
CHMP3-205ENST00000409810 ANKRD39Q53RE8 183 aa6.6□□□□□ -1.35
CHMP3-205ENST00000409810 FAM19A1Q7Z5A9 133 aa6.6□□□□□ -1.35
CHMP3-205ENST00000409810 COPS9Q8WXC6 57 aa6.6□□□□□ -1.35
CHMP3-205ENST00000409810 HERC1Q15751 4861 aa6.6□□□□□ -1.35
CHMP3-205ENST00000409810 TMEM238C9JI98 176 aa6.59□□□□□ -1.35
CHMP3-205ENST00000409810 NPC2P61916 151 aa6.59□□□□□ -1.35
CHMP3-205ENST00000409810 ADAMTSL4-AS1Q5T5F5 129 aa6.59□□□□□ -1.35
CHMP3-205ENST00000409810 TTTY13Q9BZ97 58 aa6.59□□□□□ -1.35
CHMP3-205ENST00000409810 TRBV10-3A0A0K0K1G6 114 aa6.58□□□□□ -1.36
CHMP3-205ENST00000409810 S100A7L2Q5SY68 101 aa6.58□□□□□ -1.36
CHMP3-205ENST00000409810 KRTAP13-1Q8IUC0 172 aa6.58□□□□□ -1.36
CHMP3-205ENST00000409810 LITAFQ99732 161 aa6.58□□□□□ -1.36
CHMP3-205ENST00000409810 CBY1Q9Y3M2 126 aa6.58□□□□□ -1.36
CHMP3-205ENST00000409810 SCGB1D1O95968 90 aa6.57□□□□□ -1.36
CHMP3-205ENST00000409810 DDTP30046 118 aa6.57□□□□□ -1.36
CHMP3-205ENST00000409810 PRLHP81277 87 aa6.57□□□□□ -1.36
CHMP3-205ENST00000409810 SOSTDC1Q6X4U4 206 aa6.57□□□□□ -1.36
CHMP3-205ENST00000409810 LINC00308Q8TCZ7 52 aa6.57□□□□□ -1.36
CHMP3-205ENST00000409810 SPANXDQ9BXN6 97 aa6.57□□□□□ -1.36
CHMP3-205ENST00000409810 KCNQ1DNQ9H478 68 aa6.57□□□□□ -1.36
CHMP3-205ENST00000409810 SPANXCQ9NY87 97 aa6.57□□□□□ -1.36
CHMP3-205ENST00000409810 KRTAP1-4P0C5Y4 121 aa6.56□□□□□ -1.36
CHMP3-205ENST00000409810 RPL13AP40429 203 aaKnown RBP6.56□□□□□ -1.36
CHMP3-205ENST00000409810 Q6ZVH6 145 aa6.56□□□□□ -1.36
CHMP3-205ENST00000409810 LINC00337Q8N6G1 96 aa6.56□□□□□ -1.36
CHMP3-205ENST00000409810 ETDCA0A1B0GVM5 59 aa6.55□□□□□ -1.36
CHMP3-205ENST00000409810 SPRR1AP35321 89 aa6.55□□□□□ -1.36
CHMP3-205ENST00000409810 KRTAP10-8P60410 259 aa6.55□□□□□ -1.36
CHMP3-205ENST00000409810 PCP2Q8IVA1 136 aa6.55□□□□□ -1.36
CHMP3-205ENST00000409810 IGLV6-57P01721 117 aa6.54□□□□□ -1.36
CHMP3-205ENST00000409810 IFITM1P13164 125 aa6.54□□□□□ -1.36
CHMP3-205ENST00000409810 LINC00518Q8N0U6 118 aa6.54□□□□□ -1.36
CHMP3-205ENST00000409810 HIGD2AQ9BW72 106 aa6.54□□□□□ -1.36
CHMP3-205ENST00000409810 PPDPFQ9H3Y8 114 aa6.54□□□□□ -1.36
CHMP3-205ENST00000409810 TRAV23DV6A0A075B6W5 121 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms