RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 TSPEAR-AS2P59090 65 aa5.13□□□□□ -1.59
SH3D19-203ENST00000409598 ATRQ13535 2644 aa5.13□□□□□ -1.59
SH3D19-203ENST00000409598 LINC00242Q5T6M2 205 aa5.13□□□□□ -1.59
SH3D19-203ENST00000409598 ITPR3Q14573 2671 aa5.13□□□□□ -1.59
SH3D19-203ENST00000409598 COL27A1Q8IZC6 1860 aaPredicted RBP5.13□□□□□ -1.59
SH3D19-203ENST00000409598 IGIPA6NJ69 53 aa5.12□□□□□ -1.59
SH3D19-203ENST00000409598 SLPIP03973 132 aa5.12□□□□□ -1.59
SH3D19-203ENST00000409598 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.12□□□□□ -1.59
SH3D19-203ENST00000409598 ATP5EP2Q5VTU8 51 aa5.11□□□□□ -1.59
SH3D19-203ENST00000409598 FLNAP21333 2647 aaKnown RBP5.11□□□□□ -1.59
SH3D19-203ENST00000409598 Q9BRP9 147 aa5.11□□□□□ -1.59
SH3D19-203ENST00000409598 CHD7Q9P2D1 2997 aa5.11□□□□□ -1.59
SH3D19-203ENST00000409598 BPY2O14599 106 aa5.11□□□□□ -1.59
SH3D19-203ENST00000409598 HTTP42858 3142 aa5.11□□□□□ -1.59
SH3D19-203ENST00000409598 ZNF575Q86XF7 245 aa5.1□□□□□ -1.59
SH3D19-203ENST00000409598 CSNK1G2-AS1Q8NCQ2 148 aa5.1□□□□□ -1.59
SH3D19-203ENST00000409598 BPTFQ12830 3046 aa5.1□□□□□ -1.59
SH3D19-203ENST00000409598 GVQW2A0A096LPI5 108 aaPredicted RBP5.1□□□□□ -1.59
SH3D19-203ENST00000409598 SPACA4Q8TDM5 124 aa5.1□□□□□ -1.59
SH3D19-203ENST00000409598 TRBV7-7A0A0K0K1E9 115 aa5.1□□□□□ -1.59
SH3D19-203ENST00000409598 SNURFQ9Y675 71 aa5.1□□□□□ -1.59
SH3D19-203ENST00000409598 A0A087WVE0 104 aa5.09□□□□□ -1.59
SH3D19-203ENST00000409598 LINC01546A6NGU7 62 aa5.09□□□□□ -1.59
SH3D19-203ENST00000409598 C1orf195Q5TG92 126 aa5.09□□□□□ -1.59
SH3D19-203ENST00000409598 A0A087WYN8 130 aa5.09□□□□□ -1.59
SH3D19-203ENST00000409598 FAM19A4Q96LR4 140 aa5.09□□□□□ -1.59
SH3D19-203ENST00000409598 SMCR5Q8TEV8 140 aa5.09□□□□□ -1.6
SH3D19-203ENST00000409598 TRBV10-3A0A0K0K1G6 114 aa5.08□□□□□ -1.6
SH3D19-203ENST00000409598 SMIM1B2RUZ4 78 aa5.08□□□□□ -1.6
SH3D19-203ENST00000409598 VPREB1P12018 145 aa5.08□□□□□ -1.6
SH3D19-203ENST00000409598 ADAMTSL4-AS1Q5T5F5 129 aa5.08□□□□□ -1.6
SH3D19-203ENST00000409598 Q6ZQY7 126 aa5.08□□□□□ -1.6
SH3D19-203ENST00000409598 FAM19A3Q7Z5A8 133 aa5.08□□□□□ -1.6
SH3D19-203ENST00000409598 BCE1O60756 84 aa5.07□□□□□ -1.6
SH3D19-203ENST00000409598 CCKP06307 115 aa5.07□□□□□ -1.6
SH3D19-203ENST00000409598 PRLHP81277 87 aa5.07□□□□□ -1.6
SH3D19-203ENST00000409598 ATP11AUNQ6ZP68 121 aa5.07□□□□□ -1.6
SH3D19-203ENST00000409598 SMIM26A0A096LP01 95 aa5.07□□□□□ -1.6
SH3D19-203ENST00000409598 SCXQ7RTU7 201 aa5.07□□□□□ -1.6
SH3D19-203ENST00000409598 SERP1Q9Y6X1 66 aa5.07□□□□□ -1.6
SH3D19-203ENST00000409598 A8MTW9 85 aa5.06□□□□□ -1.6
SH3D19-203ENST00000409598 PHF5AQ7RTV0 110 aaKnown RBP5.06□□□□□ -1.6
SH3D19-203ENST00000409598 LINC00304Q8N9R0 145 aa5.06□□□□□ -1.6
SH3D19-203ENST00000409598 TNP2Q05952 138 aa5.06□□□□□ -1.6
SH3D19-203ENST00000409598 Q8NBF4 154 aa5.06□□□□□ -1.6
SH3D19-203ENST00000409598 C9orf163Q8N9P6 203 aa5.06□□□□□ -1.6
SH3D19-203ENST00000409598 SPTSSBQ8NFR3 76 aa5.06□□□□□ -1.6
SH3D19-203ENST00000409598 SMIM11BQ8TCY0 68 aa5.06□□□□□ -1.6
SH3D19-203ENST00000409598 NDUFC1O43677 76 aa5.05□□□□□ -1.6
SH3D19-203ENST00000409598 ATP5EP56381 51 aaPredicted RBP5.05□□□□□ -1.6
SH3D19-203ENST00000409598 LINC00167Q96N53 147 aa5.05□□□□□ -1.6
SH3D19-203ENST00000409598 CHD9Q3L8U1 2897 aa5.05□□□□□ -1.6
SH3D19-203ENST00000409598 TEP1Q99973 2627 aaKnown RBP5.04□□□□□ -1.6
SH3D19-203ENST00000409598 MOBPQ13875 183 aa5.04□□□□□ -1.6
SH3D19-203ENST00000409598 AMELXQ99217 191 aa5.04□□□□□ -1.6
SH3D19-203ENST00000409598 AGRNO00468 2067 aa5.04□□□□□ -1.6
SH3D19-203ENST00000409598 PSORS1C2Q9UIG4 136 aa5.04□□□□□ -1.6
SH3D19-203ENST00000409598 ZNF292O60281 2723 aa5.04□□□□□ -1.6
SH3D19-203ENST00000409598 C4orf26Q17RF5 130 aa5.04□□□□□ -1.6
SH3D19-203ENST00000409598 C5orf42Q9H799 3197 aa5.04□□□□□ -1.6
SH3D19-203ENST00000409598 LINC00612Q8N6U2 182 aa5.03□□□□□ -1.6
SH3D19-203ENST00000409598 UNC79Q9P2D8 2635 aa5.03□□□□□ -1.6
SH3D19-203ENST00000409598 PRRC2CQ9Y520 2896 aaKnown RBP5.03□□□□□ -1.6
SH3D19-203ENST00000409598 RPS28P62857 69 aaKnown RBP5.03□□□□□ -1.6
SH3D19-203ENST00000409598 Q6ZVQ6 151 aa5.03□□□□□ -1.6
SH3D19-203ENST00000409598 CHTF8P0CG12 524 aa5.03□□□□□ -1.61
SH3D19-203ENST00000409598 GCN1Q92616 2671 aaKnown RBP5.02□□□□□ -1.61
SH3D19-203ENST00000409598 TRAV7A0A075B6U4 112 aa5.02□□□□□ -1.61
SH3D19-203ENST00000409598 PRO0628Q9UI54 55 aa5.02□□□□□ -1.61
SH3D19-203ENST00000409598 C6orf48Q9UBA6 75 aa5.01□□□□□ -1.61
SH3D19-203ENST00000409598 NTM-AS1Q6ZSK4 140 aa5.01□□□□□ -1.61
SH3D19-203ENST00000409598 LINC00846Q9NV44 126 aa5.01□□□□□ -1.61
SH3D19-203ENST00000409598 STAB1Q9NY15 2570 aa5.01□□□□□ -1.61
SH3D19-203ENST00000409598 SOSTDC1Q6X4U4 206 aa5.01□□□□□ -1.61
SH3D19-203ENST00000409598 IGLV1-50A0A075B6I6 118 aa5□□□□□ -1.61
SH3D19-203ENST00000409598 IGHV3OR16-9A0A0B4J2B5 98 aa5□□□□□ -1.61
SH3D19-203ENST00000409598 IGHV6-1A0A0B4J1U7 121 aa5□□□□□ -1.61
SH3D19-203ENST00000409598 ZNF861PO60384 105 aa5□□□□□ -1.61
SH3D19-203ENST00000409598 SSBP3-AS1Q7Z2R9 100 aa4.99□□□□□ -1.61
SH3D19-203ENST00000409598 GIG44P09565 113 aaPredicted RBP4.99□□□□□ -1.61
SH3D19-203ENST00000409598 CNBPP62633 177 aaKnown RBP4.99□□□□□ -1.61
SH3D19-203ENST00000409598 Q5VSD8 79 aa4.98□□□□□ -1.61
SH3D19-203ENST00000409598 IGLV7-43P04211 117 aa4.98□□□□□ -1.61
SH3D19-203ENST00000409598 RANBP2P49792 3224 aaKnown RBP4.97□□□□□ -1.61
SH3D19-203ENST00000409598 TRANK1O15050 2925 aa4.97□□□□□ -1.61
SH3D19-203ENST00000409598 COL6A5A8TX70 2615 aa4.97□□□□□ -1.61
SH3D19-203ENST00000409598 CHD6Q8TD26 2715 aa4.96□□□□□ -1.61
SH3D19-203ENST00000409598 TRBV7-6A0A0J9YX20 115 aa4.96□□□□□ -1.62
SH3D19-203ENST00000409598 K7ERS5 55 aa4.96□□□□□ -1.62
SH3D19-203ENST00000409598 PRR34Q9NV39 138 aa4.96□□□□□ -1.62
SH3D19-203ENST00000409598 OXTP01178 125 aa4.95□□□□□ -1.62
SH3D19-203ENST00000409598 A0A087WSZ3 146 aa4.95□□□□□ -1.62
SH3D19-203ENST00000409598 Q8N3U1 123 aa4.94□□□□□ -1.62
SH3D19-203ENST00000409598 IGSF10Q6WRI0 2623 aa4.94□□□□□ -1.62
SH3D19-203ENST00000409598 CR1P17927 2039 aa4.94□□□□□ -1.62
SH3D19-203ENST00000409598 WFDC13Q8IUB5 93 aa4.94□□□□□ -1.62
SH3D19-203ENST00000409598 MKI67P46013 3256 aaKnown RBP4.94□□□□□ -1.62
SH3D19-203ENST00000409598 SERTAD4-AS1Q5TG53 156 aa4.94□□□□□ -1.62
SH3D19-203ENST00000409598 FAM30AQ9NZY2 134 aa4.94□□□□□ -1.62
SH3D19-203ENST00000409598 FAM218AQ96MZ4 157 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms