RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 MIEN1Q9BRT3 115 aa10.51□□□□□ -0.73
TSPAN4-208ENST00000409531 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.51□□□□□ -0.73
TSPAN4-208ENST00000409531 ADAMTSL4-AS1Q5T5F5 129 aa10.5□□□□□ -0.73
TSPAN4-208ENST00000409531 DAND5Q8N907 189 aa10.5□□□□□ -0.73
TSPAN4-208ENST00000409531 COPS9Q8WXC6 57 aa10.5□□□□□ -0.73
TSPAN4-208ENST00000409531 SPANXDQ9BXN6 97 aa10.5□□□□□ -0.73
TSPAN4-208ENST00000409531 SPANXCQ9NY87 97 aa10.5□□□□□ -0.73
TSPAN4-208ENST00000409531 HERC1Q15751 4861 aa10.49□□□□□ -0.73
TSPAN4-208ENST00000409531 HAMPP81172 84 aa10.49□□□□□ -0.73
TSPAN4-208ENST00000409531 C9orf129Q5T035 196 aaKnown RBP10.49□□□□□ -0.73
TSPAN4-208ENST00000409531 SPANXB1Q9NS25 103 aaPredicted RBP10.49□□□□□ -0.73
TSPAN4-208ENST00000409531 HIGD1BQ9P298 99 aa10.49□□□□□ -0.73
TSPAN4-208ENST00000409531 UQCR10Q9UDW1 63 aa10.49□□□□□ -0.73
TSPAN4-208ENST00000409531 EPM2AB3EWF7 344 aa10.48□□□□□ -0.73
TSPAN4-208ENST00000409531 SMR3BP02814 79 aaPredicted RBP10.48□□□□□ -0.73
TSPAN4-208ENST00000409531 SRSF9Q13242 221 aaKnown RBP eCLIP10.48□□□□□ -0.73
TSPAN4-208ENST00000409531 LOC107984156A0A0G2JMH3 177 aa10.47□□□□□ -0.73
TSPAN4-208ENST00000409531 PANO1I0J062 215 aa10.47□□□□□ -0.73
TSPAN4-208ENST00000409531 IFITM1P13164 125 aa10.47□□□□□ -0.73
TSPAN4-208ENST00000409531 ARL17AQ8IVW1 177 aa10.47□□□□□ -0.73
TSPAN4-208ENST00000409531 LINC00518Q8N0U6 118 aa10.47□□□□□ -0.73
TSPAN4-208ENST00000409531 TP73-AS1Q9UF72 201 aa10.47□□□□□ -0.73
TSPAN4-208ENST00000409531 PLA2G2DQ9UNK4 145 aa10.47□□□□□ -0.73
TSPAN4-208ENST00000409531 A0A087WYN8 130 aa10.46□□□□□ -0.73
TSPAN4-208ENST00000409531 RPL24P83731 157 aaKnown RBP10.46□□□□□ -0.73
TSPAN4-208ENST00000409531 LINC00308Q8TCZ7 52 aa10.45□□□□□ -0.74
TSPAN4-208ENST00000409531 PPDPFQ9H3Y8 114 aa10.45□□□□□ -0.74
TSPAN4-208ENST00000409531 PLAC8Q9NZF1 115 aa10.45□□□□□ -0.74
TSPAN4-208ENST00000409531 TSTD3H0UI37 97 aa10.44□□□□□ -0.74
TSPAN4-208ENST00000409531 FAM229AH3BQW9 127 aa10.44□□□□□ -0.74
TSPAN4-208ENST00000409531 NPC2P61916 151 aa10.44□□□□□ -0.74
TSPAN4-208ENST00000409531 HIST1H4GQ99525 98 aa10.44□□□□□ -0.74
TSPAN4-208ENST00000409531 C2orf91Q6ZV80 131 aa10.43□□□□□ -0.74
TSPAN4-208ENST00000409531 SCXQ7RTU7 201 aa10.43□□□□□ -0.74
TSPAN4-208ENST00000409531 FAM19A5Q7Z5A7 132 aaPredicted RBP10.43□□□□□ -0.74
TSPAN4-208ENST00000409531 PRO1933Q9H354 126 aa10.43□□□□□ -0.74
TSPAN4-208ENST00000409531 DNAH8Q96JB1 4490 aa10.43□□□□□ -0.74
TSPAN4-208ENST00000409531 A0A1W2PNN7 141 aa10.42□□□□□ -0.74
TSPAN4-208ENST00000409531 FAM168BA1KXE4 195 aa10.42□□□□□ -0.74
TSPAN4-208ENST00000409531 Q5VSD8 79 aa10.42□□□□□ -0.74
TSPAN4-208ENST00000409531 NKAPP1Q8N9T2 125 aa10.42□□□□□ -0.74
TSPAN4-208ENST00000409531 CIRBP-AS1Q8TBR5 109 aa10.42□□□□□ -0.74
TSPAN4-208ENST00000409531 IGLV5-37A0A075B6J1 123 aa10.41□□□□□ -0.74
TSPAN4-208ENST00000409531 NDUFC2O95298 119 aa10.41□□□□□ -0.74
TSPAN4-208ENST00000409531 SOSTDC1Q6X4U4 206 aa10.41□□□□□ -0.74
TSPAN4-208ENST00000409531 M0QXV9 152 aa10.4□□□□□ -0.74
TSPAN4-208ENST00000409531 VPREB1P12018 145 aa10.4□□□□□ -0.74
TSPAN4-208ENST00000409531 TAL2Q16559 108 aa10.4□□□□□ -0.74
TSPAN4-208ENST00000409531 SERTAD4-AS1Q5TG53 156 aa10.4□□□□□ -0.74
TSPAN4-208ENST00000409531 MUSTN1Q8IVN3 82 aa10.4□□□□□ -0.74
TSPAN4-208ENST00000409531 HNRNPA3P51991 378 aaKnown RBP10.39□□□□□ -0.75
TSPAN4-208ENST00000409531 EIF4EBP3O60516 100 aaPredicted RBP10.38□□□□□ -0.75
TSPAN4-208ENST00000409531 LBHQ53QV2 105 aaPredicted RBP10.38□□□□□ -0.75
TSPAN4-208ENST00000409531 KRTAP7-1Q8IUC3 87 aa10.38□□□□□ -0.75
TSPAN4-208ENST00000409531 C22orf24Q9Y442 160 aa10.38□□□□□ -0.75
TSPAN4-208ENST00000409531 FAT1Q14517 4588 aa10.38□□□□□ -0.75
TSPAN4-208ENST00000409531 MRPL55Q7Z7F7 128 aaKnown RBP10.37□□□□□ -0.75
TSPAN4-208ENST00000409531 TRBV10-2A0A0K0K1G8 114 aa10.36□□□□□ -0.75
TSPAN4-208ENST00000409531 M0R378 163 aa10.36□□□□□ -0.75
TSPAN4-208ENST00000409531 HSD52Q0P140 79 aa10.36□□□□□ -0.75
TSPAN4-208ENST00000409531 LINC00528Q8N1L1 170 aa10.36□□□□□ -0.75
TSPAN4-208ENST00000409531 Q8NDZ9 215 aa10.36□□□□□ -0.75
TSPAN4-208ENST00000409531 C7orf33Q8WU49 177 aa10.35□□□□□ -0.75
TSPAN4-208ENST00000409531 NCR3O14931 201 aa10.34□□□□□ -0.75
TSPAN4-208ENST00000409531 PLA2G1BP04054 148 aaKnown RBP10.34□□□□□ -0.75
TSPAN4-208ENST00000409531 TMEM238LA0A1B0GVL6 79 aa10.33□□□□□ -0.76
TSPAN4-208ENST00000409531 A6NJY4 79 aa10.33□□□□□ -0.76
TSPAN4-208ENST00000409531 INAFM2P0DMQ5 153 aa10.33□□□□□ -0.76
TSPAN4-208ENST00000409531 UBE2BP63146 152 aa10.33□□□□□ -0.76
TSPAN4-208ENST00000409531 PRR3P79522 188 aaKnown RBP10.33□□□□□ -0.76
TSPAN4-208ENST00000409531 PHF5AQ7RTV0 110 aaKnown RBP10.33□□□□□ -0.76
TSPAN4-208ENST00000409531 CEND1Q8N111 149 aa10.33□□□□□ -0.76
TSPAN4-208ENST00000409531 SRRM2Q9UQ35 2752 aaKnown RBP10.33□□□□□ -0.76
TSPAN4-208ENST00000409531 A4D1N5 150 aa10.33□□□□□ -0.76
TSPAN4-208ENST00000409531 LINC00167Q96N53 147 aa10.33□□□□□ -0.76
TSPAN4-208ENST00000409531 S100A7L2Q5SY68 101 aa10.32□□□□□ -0.76
TSPAN4-208ENST00000409531 GAGE10A6NGK3 116 aa10.31□□□□□ -0.76
TSPAN4-208ENST00000409531 IGKV2-28A0A075B6P5 120 aa10.3□□□□□ -0.76
TSPAN4-208ENST00000409531 TRAV13-2A0A0B4J235 113 aa10.3□□□□□ -0.76
TSPAN4-208ENST00000409531 IGKV2D-28P01615 120 aa10.3□□□□□ -0.76
TSPAN4-208ENST00000409531 CBY1Q9Y3M2 126 aa10.3□□□□□ -0.76
TSPAN4-208ENST00000409531 IGLV1-50A0A075B6I6 118 aa10.29□□□□□ -0.76
TSPAN4-208ENST00000409531 DDTP30046 118 aa10.29□□□□□ -0.76
TSPAN4-208ENST00000409531 CTAG1AP78358 180 aa10.29□□□□□ -0.76
TSPAN4-208ENST00000409531 OR13C6PQ8NH95 151 aa10.29□□□□□ -0.76
TSPAN4-208ENST00000409531 TMEM126AQ9H061 195 aa10.29□□□□□ -0.76
TSPAN4-208ENST00000409531 RPL37AP8A6NKH3 93 aa10.28□□□□□ -0.76
TSPAN4-208ENST00000409531 TRBV10-3A0A0K0K1G6 114 aa10.27□□□□□ -0.77
TSPAN4-208ENST00000409531 M0R143 59 aa10.27□□□□□ -0.77
TSPAN4-208ENST00000409531 IGLV6-57P01721 117 aa10.27□□□□□ -0.77
TSPAN4-208ENST00000409531 LINC00337Q8N6G1 96 aa10.27□□□□□ -0.77
TSPAN4-208ENST00000409531 A6NDN8 102 aa10.26□□□□□ -0.77
TSPAN4-208ENST00000409531 FXYD2P54710 66 aa10.26□□□□□ -0.77
TSPAN4-208ENST00000409531 VPS13BQ7Z7G8 4022 aa10.25□□□□□ -0.77
TSPAN4-208ENST00000409531 A0A0B4J2C4 111 aa10.25□□□□□ -0.77
TSPAN4-208ENST00000409531 RAB37Q96AX2 223 aa10.25□□□□□ -0.77
TSPAN4-208ENST00000409531 PRYO14603 147 aa10.24□□□□□ -0.77
TSPAN4-208ENST00000409531 CFC1BP0CG36 223 aa10.24□□□□□ -0.77
TSPAN4-208ENST00000409531 CFC1P0CG37 223 aa10.24□□□□□ -0.77
TSPAN4-208ENST00000409531 KRTAP10-4P60372 401 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms