RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 Q8N814 137 aa7.45□□□□□ -1.22
NIF3L1-204ENST00000409357 TRBV7-4A0A0J9YYF1 115 aa7.44□□□□□ -1.22
NIF3L1-204ENST00000409357 RBM3P98179 157 aaKnown RBP7.44□□□□□ -1.22
NIF3L1-204ENST00000409357 SPINK13Q1W4C9 94 aa7.44□□□□□ -1.22
NIF3L1-204ENST00000409357 Q6ZSN1 163 aa7.44□□□□□ -1.22
NIF3L1-204ENST00000409357 IGHV3-38A0A0C4DH36 116 aa7.44□□□□□ -1.22
NIF3L1-204ENST00000409357 C9orf66Q5T8R8 295 aa7.44□□□□□ -1.22
NIF3L1-204ENST00000409357 Q6ZQT0 140 aa7.44□□□□□ -1.22
NIF3L1-204ENST00000409357 PRR15Q8IV56 129 aa7.44□□□□□ -1.22
NIF3L1-204ENST00000409357 DNAH3Q8TD57 4116 aa7.43□□□□□ -1.22
NIF3L1-204ENST00000409357 MIFP14174 115 aa7.43□□□□□ -1.22
NIF3L1-204ENST00000409357 C6orf226Q5I0X4 101 aa7.43□□□□□ -1.22
NIF3L1-204ENST00000409357 Q6ZRU5 148 aa7.43□□□□□ -1.22
NIF3L1-204ENST00000409357 C6orf223Q8N319 242 aa7.43□□□□□ -1.22
NIF3L1-204ENST00000409357 BRK1Q8WUW1 75 aa7.43□□□□□ -1.22
NIF3L1-204ENST00000409357 PLAC8L1A1L4L8 177 aa7.42□□□□□ -1.22
NIF3L1-204ENST00000409357 LORP23490 312 aaPredicted RBP7.42□□□□□ -1.22
NIF3L1-204ENST00000409357 LINC01547P58512 204 aaPredicted RBP7.42□□□□□ -1.22
NIF3L1-204ENST00000409357 C11orf72Q8NBR9 251 aa7.42□□□□□ -1.22
NIF3L1-204ENST00000409357 RMI2Q96E14 147 aa7.41□□□□□ -1.22
NIF3L1-204ENST00000409357 IGKV3-7A0A075B6H7 116 aa7.41□□□□□ -1.22
NIF3L1-204ENST00000409357 LINC00158P58513 81 aa7.41□□□□□ -1.22
NIF3L1-204ENST00000409357 C10orf99Q6UWK7 81 aa7.41□□□□□ -1.22
NIF3L1-204ENST00000409357 WFDC9Q8NEX5 89 aa7.41□□□□□ -1.22
NIF3L1-204ENST00000409357 IGHV3-73A0A0B4J1V6 119 aa7.4□□□□□ -1.23
NIF3L1-204ENST00000409357 ZNF561-AS1K7EIQ3 104 aa7.4□□□□□ -1.23
NIF3L1-204ENST00000409357 DYNLRB2Q8TF09 96 aa7.4□□□□□ -1.23
NIF3L1-204ENST00000409357 LINC00474Q9P2X8 69 aa7.4□□□□□ -1.23
NIF3L1-204ENST00000409357 Q9UF83 564 aa7.4□□□□□ -1.23
NIF3L1-204ENST00000409357 SLPIP03973 132 aa7.39□□□□□ -1.23
NIF3L1-204ENST00000409357 TRAV10A0A0B4J240 114 aa7.38□□□□□ -1.23
NIF3L1-204ENST00000409357 ESRGQ1W209 222 aa7.38□□□□□ -1.23
NIF3L1-204ENST00000409357 Q6ZVQ6 151 aa7.38□□□□□ -1.23
NIF3L1-204ENST00000409357 A0A087WZ39 114 aa7.38□□□□□ -1.23
NIF3L1-204ENST00000409357 PAX4O43316 350 aa7.38□□□□□ -1.23
NIF3L1-204ENST00000409357 IGHV3-11P01762 117 aa7.38□□□□□ -1.23
NIF3L1-204ENST00000409357 PMAIP1Q13794 54 aa7.38□□□□□ -1.23
NIF3L1-204ENST00000409357 EDN2P20800 178 aa7.37□□□□□ -1.23
NIF3L1-204ENST00000409357 NANOS2P60321 138 aaKnown RBP7.37□□□□□ -1.23
NIF3L1-204ENST00000409357 NTM-AS1Q6ZSK4 140 aa7.37□□□□□ -1.23
NIF3L1-204ENST00000409357 TMEM254Q8TBM7 123 aa7.37□□□□□ -1.23
NIF3L1-204ENST00000409357 SNURFQ9Y675 71 aa7.37□□□□□ -1.23
NIF3L1-204ENST00000409357 IGHV3OR16-9A0A0B4J2B5 98 aa7.36□□□□□ -1.23
NIF3L1-204ENST00000409357 IGKV3-20P01619 116 aa7.36□□□□□ -1.23
NIF3L1-204ENST00000409357 IL17DQ8TAD2 202 aa7.36□□□□□ -1.23
NIF3L1-204ENST00000409357 COL7A1Q02388 2944 aa7.36□□□□□ -1.23
NIF3L1-204ENST00000409357 Q8N3U1 123 aa7.35□□□□□ -1.23
NIF3L1-204ENST00000409357 MUC7Q8TAX7 377 aa7.35□□□□□ -1.23
NIF3L1-204ENST00000409357 A0A0U1RQV1 116 aa7.35□□□□□ -1.23
NIF3L1-204ENST00000409357 COX17Q14061 63 aa7.35□□□□□ -1.23
NIF3L1-204ENST00000409357 NREPQ16612 68 aa7.35□□□□□ -1.23
NIF3L1-204ENST00000409357 Q1T7F1 81 aa7.35□□□□□ -1.23
NIF3L1-204ENST00000409357 LINC00575Q6W349 94 aa7.35□□□□□ -1.23
NIF3L1-204ENST00000409357 PRB2P02812 416 aaPredicted RBP7.34□□□□□ -1.23
NIF3L1-204ENST00000409357 Q6ZTC4 211 aa7.34□□□□□ -1.23
NIF3L1-204ENST00000409357 C18orf65Q6ZTR6 163 aa7.34□□□□□ -1.23
NIF3L1-204ENST00000409357 Q6ZTI0 123 aa7.33□□□□□ -1.24
NIF3L1-204ENST00000409357 CD164Q04900 197 aa7.32□□□□□ -1.24
NIF3L1-204ENST00000409357 TM2D3Q9BRN9 247 aa7.32□□□□□ -1.24
NIF3L1-204ENST00000409357 H3BS24 57 aa7.32□□□□□ -1.24
NIF3L1-204ENST00000409357 PRYO14603 147 aa7.32□□□□□ -1.24
NIF3L1-204ENST00000409357 UBE2L6O14933 153 aa7.32□□□□□ -1.24
NIF3L1-204ENST00000409357 HAMPP81172 84 aa7.32□□□□□ -1.24
NIF3L1-204ENST00000409357 KHDC1LQ5JSQ8 128 aa7.32□□□□□ -1.24
NIF3L1-204ENST00000409357 Q8IZM0 81 aa7.32□□□□□ -1.24
NIF3L1-204ENST00000409357 FUSP35637 526 aaKnown RBP eCLIP7.31□□□□□ -1.24
NIF3L1-204ENST00000409357 DEFB114Q30KQ6 69 aa7.31□□□□□ -1.24
NIF3L1-204ENST00000409357 C11orf68Q9H3H3 251 aaKnown RBP7.31□□□□□ -1.24
NIF3L1-204ENST00000409357 BPY2O14599 106 aa7.3□□□□□ -1.24
NIF3L1-204ENST00000409357 INSP01308 110 aa7.3□□□□□ -1.24
NIF3L1-204ENST00000409357 OCR1Q9BZK8 76 aa7.3□□□□□ -1.24
NIF3L1-204ENST00000409357 FAM229BQ4G0N7 80 aa7.29□□□□□ -1.24
NIF3L1-204ENST00000409357 KPRPQ5T749 579 aaPredicted RBP7.29□□□□□ -1.24
NIF3L1-204ENST00000409357 TOMM7Q9P0U1 55 aa7.29□□□□□ -1.24
NIF3L1-204ENST00000409357 LCE6AA0A183 80 aa7.28□□□□□ -1.24
NIF3L1-204ENST00000409357 IGHV4-28A0A0C4DH34 117 aa7.28□□□□□ -1.24
NIF3L1-204ENST00000409357 hDV103S1A0JD37 113 aa7.28□□□□□ -1.24
NIF3L1-204ENST00000409357 DEFB136Q30KP8 78 aa7.28□□□□□ -1.24
NIF3L1-204ENST00000409357 DNAH9Q9NYC9 4486 aa7.27□□□□□ -1.25
NIF3L1-204ENST00000409357 DEFB131AP59861 70 aa7.26□□□□□ -1.25
NIF3L1-204ENST00000409357 LYRM9A8MSI8 78 aa7.25□□□□□ -1.25
NIF3L1-204ENST00000409357 HTN1P15515 57 aa7.25□□□□□ -1.25
NIF3L1-204ENST00000409357 KRTAP10-11P60412 298 aa7.25□□□□□ -1.25
NIF3L1-204ENST00000409357 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.25□□□□□ -1.25
NIF3L1-204ENST00000409357 MPLKIPQ8TAP9 179 aa7.25□□□□□ -1.25
NIF3L1-204ENST00000409357 STAB2Q8WWQ8 2551 aa7.25□□□□□ -1.25
NIF3L1-204ENST00000409357 C6orf99Q4VX62 202 aa7.25□□□□□ -1.25
NIF3L1-204ENST00000409357 STHQ8IWL8 128 aa7.25□□□□□ -1.25
NIF3L1-204ENST00000409357 A0A1B0GW54 56 aa7.24□□□□□ -1.25
NIF3L1-204ENST00000409357 UBE2E2Q96LR5 201 aa7.24□□□□□ -1.25
NIF3L1-204ENST00000409357 TENM3Q9P273 2699 aa7.24□□□□□ -1.25
NIF3L1-204ENST00000409357 LINC00959A0A1B0GUT2 108 aa7.23□□□□□ -1.25
NIF3L1-204ENST00000409357 M0R2N4 97 aa7.23□□□□□ -1.25
NIF3L1-204ENST00000409357 CCL24O00175 119 aa7.23□□□□□ -1.25
NIF3L1-204ENST00000409357 CYP4F30PQ9H0H9 118 aa7.23□□□□□ -1.25
NIF3L1-204ENST00000409357 TRBV6-8A0A0A6YYG3 113 aa7.22□□□□□ -1.25
NIF3L1-204ENST00000409357 LOC100131303A0A0U1RQF7 123 aa7.22□□□□□ -1.25
NIF3L1-204ENST00000409357 A0A1B0GUV1 79 aa7.22□□□□□ -1.25
NIF3L1-204ENST00000409357 COX7BP24311 80 aa7.22□□□□□ -1.25
NIF3L1-204ENST00000409357 SORL1Q92673 2214 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms