RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 WNK1Q9H4A3 2382 aa3.36□□□□□ -1.87
SCN3A-203ENST00000409101 SNURFQ9Y675 71 aa3.36□□□□□ -1.87
SCN3A-203ENST00000409101 NDUFC1O43677 76 aa3.36□□□□□ -1.87
SCN3A-203ENST00000409101 CDIP1Q9H305 208 aa3.36□□□□□ -1.87
SCN3A-203ENST00000409101 ATP5EP56381 51 aaPredicted RBP3.36□□□□□ -1.87
SCN3A-203ENST00000409101 SPAG11AQ6PDA7 123 aa3.36□□□□□ -1.87
SCN3A-203ENST00000409101 FAM168BA1KXE4 195 aa3.36□□□□□ -1.87
SCN3A-203ENST00000409101 V9GYY9 64 aa3.36□□□□□ -1.87
SCN3A-203ENST00000409101 IGLV5-45A0A087WSX0 123 aa3.35□□□□□ -1.87
SCN3A-203ENST00000409101 H0Y9P7 68 aa3.35□□□□□ -1.87
SCN3A-203ENST00000409101 PCOTHQ58A44 107 aa3.35□□□□□ -1.87
SCN3A-203ENST00000409101 PIEZO2Q9H5I5 2752 aa3.35□□□□□ -1.87
SCN3A-203ENST00000409101 hDV103S1A0JD37 113 aa3.35□□□□□ -1.87
SCN3A-203ENST00000409101 ZNF462Q96JM2 2506 aa3.35□□□□□ -1.87
SCN3A-203ENST00000409101 A0A096LNJ9 63 aa3.35□□□□□ -1.87
SCN3A-203ENST00000409101 MT-ATP8P03928 68 aa3.35□□□□□ -1.87
SCN3A-203ENST00000409101 Q9UF83 564 aa3.35□□□□□ -1.87
SCN3A-203ENST00000409101 UQCRQO14949 82 aa3.35□□□□□ -1.87
SCN3A-203ENST00000409101 MPLKIPQ8TAP9 179 aa3.35□□□□□ -1.87
SCN3A-203ENST00000409101 ZNF575Q86XF7 245 aa3.34□□□□□ -1.87
SCN3A-203ENST00000409101 ST20-AS1Q8NBB2 130 aa3.34□□□□□ -1.88
SCN3A-203ENST00000409101 SONP18583 2426 aaKnown RBP3.33□□□□□ -1.88
SCN3A-203ENST00000409101 GIG44P09565 113 aaPredicted RBP3.33□□□□□ -1.88
SCN3A-203ENST00000409101 IMUPQ9GZP8 106 aa3.33□□□□□ -1.88
SCN3A-203ENST00000409101 LINC00612Q8N6U2 182 aa3.33□□□□□ -1.88
SCN3A-203ENST00000409101 ZNF861PO60384 105 aa3.33□□□□□ -1.88
SCN3A-203ENST00000409101 IGLV1-50A0A075B6I6 118 aa3.33□□□□□ -1.88
SCN3A-203ENST00000409101 SERTAD4-AS1Q5TG53 156 aa3.33□□□□□ -1.88
SCN3A-203ENST00000409101 LINC00310P59036 64 aa3.32□□□□□ -1.88
SCN3A-203ENST00000409101 TP53AIP1Q9HCN2 124 aa3.32□□□□□ -1.88
SCN3A-203ENST00000409101 IGLV7-43P04211 117 aa3.32□□□□□ -1.88
SCN3A-203ENST00000409101 C15orf56Q8N910 161 aa3.32□□□□□ -1.88
SCN3A-203ENST00000409101 C9orf163Q8N9P6 203 aa3.32□□□□□ -1.88
SCN3A-203ENST00000409101 C8orf87E5RJ46 101 aa3.31□□□□□ -1.88
SCN3A-203ENST00000409101 TRAV7A0A075B6U4 112 aa3.31□□□□□ -1.88
SCN3A-203ENST00000409101 PRR34Q9NV39 138 aa3.31□□□□□ -1.88
SCN3A-203ENST00000409101 DSCAML1Q8TD84 2053 aa3.31□□□□□ -1.88
SCN3A-203ENST00000409101 C9orf92A6NGG3 77 aa3.31□□□□□ -1.88
SCN3A-203ENST00000409101 VPREB1P12018 145 aa3.31□□□□□ -1.88
SCN3A-203ENST00000409101 A0A1B0GW54 56 aa3.31□□□□□ -1.88
SCN3A-203ENST00000409101 TNP2Q05952 138 aa3.31□□□□□ -1.88
SCN3A-203ENST00000409101 ABCA2Q9BZC7 2435 aa3.31□□□□□ -1.88
SCN3A-203ENST00000409101 C1orf64Q8NEQ6 169 aa3.3□□□□□ -1.88
SCN3A-203ENST00000409101 AGRNO00468 2067 aa3.3□□□□□ -1.88
SCN3A-203ENST00000409101 FAM240AA0A1B0GVK7 77 aa3.3□□□□□ -1.88
SCN3A-203ENST00000409101 SSBP3-AS1Q7Z2R9 100 aa3.3□□□□□ -1.88
SCN3A-203ENST00000409101 SVIPQ8NHG7 77 aa3.3□□□□□ -1.88
SCN3A-203ENST00000409101 PLXNB1O43157 2135 aa3.3□□□□□ -1.88
SCN3A-203ENST00000409101 A6NED7 52 aa3.3□□□□□ -1.88
SCN3A-203ENST00000409101 CNBPP62633 177 aaKnown RBP3.3□□□□□ -1.88
SCN3A-203ENST00000409101 BRK1Q8WUW1 75 aa3.3□□□□□ -1.88
SCN3A-203ENST00000409101 CXCL6P80162 114 aa3.29□□□□□ -1.88
SCN3A-203ENST00000409101 EPG5Q9HCE0 2579 aa3.29□□□□□ -1.88
SCN3A-203ENST00000409101 LRRK2Q5S007 2527 aa3.29□□□□□ -1.88
SCN3A-203ENST00000409101 TLX1NBP0CAT3 122 aa3.29□□□□□ -1.88
SCN3A-203ENST00000409101 FASNP49327 2511 aaKnown RBP3.29□□□□□ -1.88
SCN3A-203ENST00000409101 KCNQ1DNQ9H478 68 aa3.28□□□□□ -1.88
SCN3A-203ENST00000409101 IGLV6-57P01721 117 aa3.28□□□□□ -1.88
SCN3A-203ENST00000409101 SMIM29Q86T20 159 aa3.28□□□□□ -1.88
SCN3A-203ENST00000409101 TRBV7-7A0A0K0K1E9 115 aa3.28□□□□□ -1.88
SCN3A-203ENST00000409101 SOSTDC1Q6X4U4 206 aa3.28□□□□□ -1.88
SCN3A-203ENST00000409101 PSORS1C2Q9UIG4 136 aa3.28□□□□□ -1.88
SCN3A-203ENST00000409101 PLA2G2DQ9UNK4 145 aa3.28□□□□□ -1.88
SCN3A-203ENST00000409101 A0A087WVE0 104 aa3.28□□□□□ -1.88
SCN3A-203ENST00000409101 C9orf129Q5T035 196 aaKnown RBP3.28□□□□□ -1.88
SCN3A-203ENST00000409101 COX7CP15954 63 aa3.28□□□□□ -1.88
SCN3A-203ENST00000409101 TLN1Q9Y490 2541 aaKnown RBP3.28□□□□□ -1.88
SCN3A-203ENST00000409101 RBM12B-AS1Q9P1G2 102 aa3.28□□□□□ -1.89
SCN3A-203ENST00000409101 LCE6AA0A183 80 aa3.27□□□□□ -1.89
SCN3A-203ENST00000409101 SORL1Q92673 2214 aa3.27□□□□□ -1.89
SCN3A-203ENST00000409101 WIPF1O43516 503 aa3.27□□□□□ -1.89
SCN3A-203ENST00000409101 OBSCN-AS1Q96MR7 158 aa3.27□□□□□ -1.89
SCN3A-203ENST00000409101 DSCR10P59022 87 aa3.27□□□□□ -1.89
SCN3A-203ENST00000409101 A0A1W2PNN7 141 aa3.27□□□□□ -1.89
SCN3A-203ENST00000409101 ACYP2P14621 99 aa3.27□□□□□ -1.89
SCN3A-203ENST00000409101 TRBV7-4A0A0J9YYF1 115 aa3.26□□□□□ -1.89
SCN3A-203ENST00000409101 LINC00846Q9NV44 126 aa3.26□□□□□ -1.89
SCN3A-203ENST00000409101 LOC110117498A0A087WWA1 95 aa3.26□□□□□ -1.89
SCN3A-203ENST00000409101 SPTBN4Q9H254 2564 aa3.26□□□□□ -1.89
SCN3A-203ENST00000409101 TRAV22A0A0B4J277 110 aa3.26□□□□□ -1.89
SCN3A-203ENST00000409101 A8MWP4 228 aa3.25□□□□□ -1.89
SCN3A-203ENST00000409101 FAM218AQ96MZ4 157 aa3.25□□□□□ -1.89
SCN3A-203ENST00000409101 ANAPC11Q9NYG5 84 aa3.25□□□□□ -1.89
SCN3A-203ENST00000409101 ANKRD11Q6UB99 2663 aaPredicted RBP3.25□□□□□ -1.89
SCN3A-203ENST00000409101 Q6ZQT0 140 aa3.25□□□□□ -1.89
SCN3A-203ENST00000409101 UTRNP46939 3433 aa3.25□□□□□ -1.89
SCN3A-203ENST00000409101 MRPL34Q9BQ48 92 aaKnown RBP3.24□□□□□ -1.89
SCN3A-203ENST00000409101 IGLV5-37A0A075B6J1 123 aa3.24□□□□□ -1.89
SCN3A-203ENST00000409101 SPRR4Q96PI1 79 aa3.24□□□□□ -1.89
SCN3A-203ENST00000409101 JMJD1CQ15652 2540 aa3.24□□□□□ -1.89
SCN3A-203ENST00000409101 IGFL1Q6UW32 110 aa3.24□□□□□ -1.89
SCN3A-203ENST00000409101 IGLV7-46A0A075B6I9 117 aa3.23□□□□□ -1.89
SCN3A-203ENST00000409101 TMEM254Q8TBM7 123 aa3.23□□□□□ -1.89
SCN3A-203ENST00000409101 DOPEY1Q5JWR5 2465 aa3.23□□□□□ -1.89
SCN3A-203ENST00000409101 LOC101927531A0A1B0GV80 90 aa3.23□□□□□ -1.89
SCN3A-203ENST00000409101 H3BPC8 53 aa3.23□□□□□ -1.89
SCN3A-203ENST00000409101 Q6ZSA8 131 aa3.23□□□□□ -1.89
SCN3A-203ENST00000409101 FLNBO75369 2602 aaKnown RBP3.23□□□□□ -1.89
SCN3A-203ENST00000409101 CEP295Q9C0D2 2601 aa3.23□□□□□ -1.89
SCN3A-203ENST00000409101 Q5VSD8 79 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms