RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 LEPROTL1O95214 131 aa5.41□□□□□ -1.54
SNORD88A-201ENST00000408314 PLNP26678 52 aa5.41□□□□□ -1.54
SNORD88A-201ENST00000408314 HERVK_113P61574 105 aa5.41□□□□□ -1.54
SNORD88A-201ENST00000408314 FAM19A1Q7Z5A9 133 aa5.41□□□□□ -1.54
SNORD88A-201ENST00000408314 CBLN2Q8IUK8 224 aa5.41□□□□□ -1.54
SNORD88A-201ENST00000408314 TYMSOSQ8TAI1 123 aa5.41□□□□□ -1.54
SNORD88A-201ENST00000408314 TMEM126AQ9H061 195 aa5.41□□□□□ -1.54
SNORD88A-201ENST00000408314 HSPB8Q9UJY1 196 aa5.41□□□□□ -1.54
SNORD88A-201ENST00000408314 KRTAP13-1Q8IUC0 172 aa5.4□□□□□ -1.54
SNORD88A-201ENST00000408314 IGKV2D-26A0A0A0MRZ7 120 aa5.39□□□□□ -1.55
SNORD88A-201ENST00000408314 M0R378 163 aa5.39□□□□□ -1.55
SNORD88A-201ENST00000408314 TRGC2P03986 189 aa5.39□□□□□ -1.55
SNORD88A-201ENST00000408314 CTAG1AP78358 180 aa5.39□□□□□ -1.55
SNORD88A-201ENST00000408314 PRR4Q16378 134 aa5.39□□□□□ -1.55
SNORD88A-201ENST00000408314 PLEKHB2Q96CS7 222 aa5.39□□□□□ -1.55
SNORD88A-201ENST00000408314 NDUFA12Q9UI09 145 aa5.39□□□□□ -1.55
SNORD88A-201ENST00000408314 ZNF706Q9Y5V0 76 aaPredicted RBP5.39□□□□□ -1.55
SNORD88A-201ENST00000408314 PRLHP81277 87 aa5.38□□□□□ -1.55
SNORD88A-201ENST00000408314 BOD1L2Q8IYS8 172 aa5.38□□□□□ -1.55
SNORD88A-201ENST00000408314 FAM19A2Q8N3H0 131 aa5.38□□□□□ -1.55
SNORD88A-201ENST00000408314 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
SNORD88A-201ENST00000408314 A0A087X002 238 aa5.37□□□□□ -1.55
SNORD88A-201ENST00000408314 A0A0U1RRA0 63 aa5.37□□□□□ -1.55
SNORD88A-201ENST00000408314 TMEM238C9JI98 176 aa5.37□□□□□ -1.55
SNORD88A-201ENST00000408314 H0Y8G0 127 aa5.37□□□□□ -1.55
SNORD88A-201ENST00000408314 PRYO14603 147 aa5.37□□□□□ -1.55
SNORD88A-201ENST00000408314 SCO1O75880 301 aa5.37□□□□□ -1.55
SNORD88A-201ENST00000408314 SERF1AO75920 110 aa5.37□□□□□ -1.55
SNORD88A-201ENST00000408314 DPM2O94777 84 aa5.37□□□□□ -1.55
SNORD88A-201ENST00000408314 SMIM13P0DJ93 91 aa5.37□□□□□ -1.55
SNORD88A-201ENST00000408314 NMUP48645 174 aa5.37□□□□□ -1.55
SNORD88A-201ENST00000408314 MIEN1Q9BRT3 115 aa5.37□□□□□ -1.55
SNORD88A-201ENST00000408314 LEPROTO15243 131 aa5.36□□□□□ -1.55
SNORD88A-201ENST00000408314 MIR7-3HGQ8N6C7 128 aa5.36□□□□□ -1.55
SNORD88A-201ENST00000408314 LINC00304Q8N9R0 145 aa5.36□□□□□ -1.55
SNORD88A-201ENST00000408314 HIGD2AQ9BW72 106 aa5.36□□□□□ -1.55
SNORD88A-201ENST00000408314 ETDCA0A1B0GVM5 59 aa5.35□□□□□ -1.55
SNORD88A-201ENST00000408314 LGALS3P17931 250 aaKnown RBP5.35□□□□□ -1.55
SNORD88A-201ENST00000408314 LINC00337Q8N6G1 96 aa5.35□□□□□ -1.55
SNORD88A-201ENST00000408314 J3QQQ9 107 aa5.34□□□□□ -1.55
SNORD88A-201ENST00000408314 TSPAN13O95857 204 aa5.34□□□□□ -1.55
SNORD88A-201ENST00000408314 IGKCP01834 107 aa5.34□□□□□ -1.55
SNORD88A-201ENST00000408314 FABP4P15090 132 aa5.34□□□□□ -1.55
SNORD88A-201ENST00000408314 KCNQ1DNQ9H478 68 aa5.34□□□□□ -1.55
SNORD88A-201ENST00000408314 CBY1Q9Y3M2 126 aa5.34□□□□□ -1.55
SNORD88A-201ENST00000408314 TRBV10-2A0A0K0K1G8 114 aa5.33□□□□□ -1.56
SNORD88A-201ENST00000408314 NCR3O14931 201 aa5.33□□□□□ -1.56
SNORD88A-201ENST00000408314 SPAG11AQ6PDA7 123 aa5.33□□□□□ -1.56
SNORD88A-201ENST00000408314 Q8NDZ9 215 aa5.33□□□□□ -1.56
SNORD88A-201ENST00000408314 SPANXB1Q9NS25 103 aaPredicted RBP5.33□□□□□ -1.56
SNORD88A-201ENST00000408314 LOC107984156A0A0G2JMH3 177 aa5.32□□□□□ -1.56
SNORD88A-201ENST00000408314 COLCA2A8K830 154 aa5.32□□□□□ -1.56
SNORD88A-201ENST00000408314 SPRR1AP35321 89 aa5.32□□□□□ -1.56
SNORD88A-201ENST00000408314 LINC00310P59036 64 aa5.32□□□□□ -1.56
SNORD88A-201ENST00000408314 KRTAP13-2Q52LG2 175 aa5.32□□□□□ -1.56
SNORD88A-201ENST00000408314 ARL17AQ8IVW1 177 aa5.32□□□□□ -1.56
SNORD88A-201ENST00000408314 NDUFC2O95298 119 aa5.31□□□□□ -1.56
SNORD88A-201ENST00000408314 DDTP30046 118 aa5.31□□□□□ -1.56
SNORD88A-201ENST00000408314 C4orf48Q5BLP8 95 aa5.31□□□□□ -1.56
SNORD88A-201ENST00000408314 SLC7A5P1Q8MH63 180 aa5.31□□□□□ -1.56
SNORD88A-201ENST00000408314 SPRR4Q96PI1 79 aa5.31□□□□□ -1.56
SNORD88A-201ENST00000408314 ANAPC11Q9NYG5 84 aa5.31□□□□□ -1.56
SNORD88A-201ENST00000408314 TRBV10-3A0A0K0K1G6 114 aa5.3□□□□□ -1.56
SNORD88A-201ENST00000408314 A0A0U1RQV1 116 aa5.3□□□□□ -1.56
SNORD88A-201ENST00000408314 TSPEAR-AS2P59090 65 aa5.3□□□□□ -1.56
SNORD88A-201ENST00000408314 JOSD1Q15040 202 aaPredicted RBP5.3□□□□□ -1.56
SNORD88A-201ENST00000408314 S100A7L2Q5SY68 101 aa5.3□□□□□ -1.56
SNORD88A-201ENST00000408314 E9PLD3 99 aa5.29□□□□□ -1.56
SNORD88A-201ENST00000408314 PMCHL2Q9BQD1 86 aa5.29□□□□□ -1.56
SNORD88A-201ENST00000408314 HINT1P49773 126 aaPredicted RBP5.28□□□□□ -1.56
SNORD88A-201ENST00000408314 PET117Q6UWS5 81 aa5.28□□□□□ -1.56
SNORD88A-201ENST00000408314 DAND5Q8N907 189 aa5.28□□□□□ -1.56
SNORD88A-201ENST00000408314 SMCR5Q8TEV8 140 aa5.28□□□□□ -1.56
SNORD88A-201ENST00000408314 LPAP08519 4548 aa5.28□□□□□ -1.56
SNORD88A-201ENST00000408314 KRTAP4-16G5E9R7 235 aaPredicted RBP5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 SYS1-DBNDD2H3BUS1 97 aa5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 HIST1H2BKO60814 126 aa5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 HIST1H2BJP06899 126 aa5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 HIST1H2BOP23527 126 aa5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 HIST1H2BBP33778 126 aa5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 AKR1D1P51857 326 aa5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 HIST1H2BDP58876 126 aa5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 HIST1H2BCP62807 126 aa5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 HIST2H2BEQ16778 126 aa5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 Q6ZRX8 168 aa5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 C3orf22Q8N5N4 141 aa5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 HIST1H2BHQ93079 126 aa5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 HIST1H2BNQ99877 126 aa5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 HIST1H2BMQ99879 126 aa5.27□□□□□ -1.57
SNORD88A-201ENST00000408314 TRAV23DV6A0A075B6W5 121 aa5.26□□□□□ -1.57
SNORD88A-201ENST00000408314 A0A0J9YXY3 114 aa5.26□□□□□ -1.57
SNORD88A-201ENST00000408314 C20orf202A1L168 122 aa5.26□□□□□ -1.57
SNORD88A-201ENST00000408314 B5MCH6 92 aa5.26□□□□□ -1.57
SNORD88A-201ENST00000408314 TIMM17BO60830 172 aa5.26□□□□□ -1.57
SNORD88A-201ENST00000408314 TPRXLQ17RH7 258 aa5.26□□□□□ -1.57
SNORD88A-201ENST00000408314 LINC00483Q53H64 154 aa5.26□□□□□ -1.57
SNORD88A-201ENST00000408314 LINC01545Q5VT33 79 aa5.26□□□□□ -1.57
SNORD88A-201ENST00000408314 FP248Q71RG6 208 aaPredicted RBP5.26□□□□□ -1.57
SNORD88A-201ENST00000408314 IGLV7-46A0A075B6I9 117 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms