RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 ITSN1Q15811 1721 aa0.73□□□□□ -2.29
PTPN12-202ENST00000407343 A0A087WWC5 75 aa0.73□□□□□ -2.29
PTPN12-202ENST00000407343 IFI6P09912 130 aa0.73□□□□□ -2.29
PTPN12-202ENST00000407343 COX8AP10176 69 aa0.73□□□□□ -2.29
PTPN12-202ENST00000407343 ERCC6L2Q5T890 1561 aa0.73□□□□□ -2.29
PTPN12-202ENST00000407343 FAM208BQ5VWN6 2430 aa0.73□□□□□ -2.29
PTPN12-202ENST00000407343 HFM1A2PYH4 1435 aa0.72□□□□□ -2.29
PTPN12-202ENST00000407343 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
PTPN12-202ENST00000407343 PIEZO2Q9H5I5 2752 aa0.72□□□□□ -2.29
PTPN12-202ENST00000407343 CDC42BPGQ6DT37 1551 aa0.72□□□□□ -2.29
PTPN12-202ENST00000407343 DEFB112Q30KQ8 113 aa0.72□□□□□ -2.29
PTPN12-202ENST00000407343 SPINK9Q5DT21 86 aa0.72□□□□□ -2.29
PTPN12-202ENST00000407343 S100ZQ8WXG8 99 aa0.72□□□□□ -2.29
PTPN12-202ENST00000407343 ABCA9Q8IUA7 1624 aa0.71□□□□□ -2.3
PTPN12-202ENST00000407343 A0A0D9SG42 100 aa0.71□□□□□ -2.3
PTPN12-202ENST00000407343 LCE6AA0A183 80 aa0.71□□□□□ -2.3
PTPN12-202ENST00000407343 I3L2K1 104 aa0.71□□□□□ -2.3
PTPN12-202ENST00000407343 GAFA1Q96PS6 74 aa0.71□□□□□ -2.3
PTPN12-202ENST00000407343 A0A0G2JMZ2 1700 aa0.71□□□□□ -2.3
PTPN12-202ENST00000407343 PKD1L3Q7Z443 1732 aa0.71□□□□□ -2.3
PTPN12-202ENST00000407343 KIAA0556O60303 1618 aa0.71□□□□□ -2.3
PTPN12-202ENST00000407343 PLXNB2O15031 1838 aa0.71□□□□□ -2.3
PTPN12-202ENST00000407343 THOC2Q8NI27 1593 aaKnown RBP0.7□□□□□ -2.3
PTPN12-202ENST00000407343 ANKRD36A6QL64 1941 aa0.7□□□□□ -2.3
PTPN12-202ENST00000407343 H3BVH4 76 aa0.7□□□□□ -2.3
PTPN12-202ENST00000407343 NDUFB1O75438 58 aa0.7□□□□□ -2.3
PTPN12-202ENST00000407343 NREPQ16612 68 aa0.7□□□□□ -2.3
PTPN12-202ENST00000407343 WFDC9Q8NEX5 89 aa0.7□□□□□ -2.3
PTPN12-202ENST00000407343 APCP25054 2843 aa0.7□□□□□ -2.3
PTPN12-202ENST00000407343 MEGF8Q7Z7M0 2845 aa0.7□□□□□ -2.3
PTPN12-202ENST00000407343 DIP2AQ14689 1571 aa0.7□□□□□ -2.3
PTPN12-202ENST00000407343 PAPPAQ13219 1627 aa0.69□□□□□ -2.3
PTPN12-202ENST00000407343 FXYD6-FXYD2A0A087WZ82 144 aa0.69□□□□□ -2.3
PTPN12-202ENST00000407343 C3orf79P0CE67 100 aa0.69□□□□□ -2.3
PTPN12-202ENST00000407343 COX7BP24311 80 aa0.69□□□□□ -2.3
PTPN12-202ENST00000407343 TP53AIP1Q9HCN2 124 aa0.69□□□□□ -2.3
PTPN12-202ENST00000407343 AHCTF1Q8WYP5 2266 aa0.69□□□□□ -2.3
PTPN12-202ENST00000407343 ANKRD50Q9ULJ7 1429 aa0.69□□□□□ -2.3
PTPN12-202ENST00000407343 GOLGA4Q13439 2230 aaKnown RBP0.69□□□□□ -2.3
PTPN12-202ENST00000407343 LMTK2Q8IWU2 1503 aa0.69□□□□□ -2.3
PTPN12-202ENST00000407343 EIF2AK4Q9P2K8 1649 aaKnown RBP0.68□□□□□ -2.3
PTPN12-202ENST00000407343 SFTA3P0C7M3 94 aa0.68□□□□□ -2.3
PTPN12-202ENST00000407343 DEFB123Q8N688 67 aa0.68□□□□□ -2.3
PTPN12-202ENST00000407343 FAM103A1Q9BTL3 118 aaKnown RBP0.68□□□□□ -2.3
PTPN12-202ENST00000407343 CNFNQ9BYD5 112 aa0.68□□□□□ -2.3
PTPN12-202ENST00000407343 CICQ96RK0 1608 aaPredicted RBP0.67□□□□□ -2.3
PTPN12-202ENST00000407343 CCDC180Q9P1Z9 1646 aa0.67□□□□□ -2.3
PTPN12-202ENST00000407343 LRRC37AA6NMS7 1700 aa0.67□□□□□ -2.3
PTPN12-202ENST00000407343 POLR1AO95602 1720 aaPredicted RBP0.67□□□□□ -2.3
PTPN12-202ENST00000407343 TIAM2Q8IVF5 1701 aa0.67□□□□□ -2.3
PTPN12-202ENST00000407343 ATXN8Q156A1 80 aa0.67□□□□□ -2.3
PTPN12-202ENST00000407343 CRIPTQ9P021 101 aa0.67□□□□□ -2.3
PTPN12-202ENST00000407343 WIZO95785 1651 aa0.67□□□□□ -2.3
PTPN12-202ENST00000407343 DOT1LQ8TEK3 1739 aa0.67□□□□□ -2.3
PTPN12-202ENST00000407343 FMN2Q9NZ56 1722 aa0.67□□□□□ -2.3
PTPN12-202ENST00000407343 PARP4Q9UKK3 1724 aaKnown RBP0.67□□□□□ -2.3
PTPN12-202ENST00000407343 AHNAKQ09666 5890 aaKnown RBP0.66□□□□□ -2.3
PTPN12-202ENST00000407343 TIAM1Q13009 1591 aa0.66□□□□□ -2.3
PTPN12-202ENST00000407343 POLQO75417 2590 aa0.66□□□□□ -2.3
PTPN12-202ENST00000407343 PLCH1Q4KWH8 1693 aa0.66□□□□□ -2.3
PTPN12-202ENST00000407343 CFAP43Q8NDM7 1665 aa0.66□□□□□ -2.3
PTPN12-202ENST00000407343 A0A0D9SFI3 127 aa0.66□□□□□ -2.3
PTPN12-202ENST00000407343 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
PTPN12-202ENST00000407343 GNG13Q9P2W3 67 aa0.66□□□□□ -2.3
PTPN12-202ENST00000407343 RALGAPBQ86X10 1494 aa0.66□□□□□ -2.3
PTPN12-202ENST00000407343 NHSQ6T4R5 1651 aa0.65□□□□□ -2.3
PTPN12-202ENST00000407343 BCORQ6W2J9 1755 aa0.65□□□□□ -2.3
PTPN12-202ENST00000407343 QSER1Q2KHR3 1735 aa0.65□□□□□ -2.31
PTPN12-202ENST00000407343 CPSF4LA6NMK7 179 aaKnown RBP0.65□□□□□ -2.31
PTPN12-202ENST00000407343 K7EQZ3 153 aa0.65□□□□□ -2.31
PTPN12-202ENST00000407343 PIGYQ3MUY2 71 aa0.65□□□□□ -2.31
PTPN12-202ENST00000407343 PRO0255Q9UI72 69 aa0.65□□□□□ -2.31
PTPN12-202ENST00000407343 CACNA1HO95180 2353 aa0.65□□□□□ -2.31
PTPN12-202ENST00000407343 CACNA1EQ15878 2313 aa0.65□□□□□ -2.31
PTPN12-202ENST00000407343 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.65□□□□□ -2.313e-6■■■■□ 22.8
PTPN12-202ENST00000407343 PIEZO1Q92508 2521 aa0.65□□□□□ -2.31
PTPN12-202ENST00000407343 PREX2Q70Z35 1606 aa0.64□□□□□ -2.31
PTPN12-202ENST00000407343 CHD9Q3L8U1 2897 aa0.64□□□□□ -2.31
PTPN12-202ENST00000407343 ZNF292O60281 2723 aa0.64□□□□□ -2.31
PTPN12-202ENST00000407343 SPTY2D1-AS1A0A0U1RR47 76 aa0.64□□□□□ -2.31
PTPN12-202ENST00000407343 NDUFA4O00483 81 aa0.64□□□□□ -2.31
PTPN12-202ENST00000407343 PRH1P02810 166 aa0.64□□□□□ -2.31
PTPN12-202ENST00000407343 COX6A2Q02221 97 aa0.64□□□□□ -2.31
PTPN12-202ENST00000407343 GLI2P10070 1586 aa0.64□□□□□ -2.31
PTPN12-202ENST00000407343 RICTORQ6R327 1708 aa0.64□□□□□ -2.31
PTPN12-202ENST00000407343 ABCA6Q8N139 1617 aa0.64□□□□□ -2.31
PTPN12-202ENST00000407343 GPR98Q8WXG9 6306 aa0.63□□□□□ -2.31
PTPN12-202ENST00000407343 URB1O60287 2271 aaKnown RBP0.63□□□□□ -2.31
PTPN12-202ENST00000407343 UBR3Q6ZT12 1888 aa0.63□□□□□ -2.31
PTPN12-202ENST00000407343 BDP1A6H8Y1 2624 aa0.63□□□□□ -2.31
PTPN12-202ENST00000407343 PLXNC1O60486 1568 aa0.63□□□□□ -2.31
PTPN12-202ENST00000407343 LINC01549A6NIU2 74 aa0.63□□□□□ -2.31
PTPN12-202ENST00000407343 ENHOQ6UWT2 76 aa0.63□□□□□ -2.31
PTPN12-202ENST00000407343 Q8IZM0 81 aa0.63□□□□□ -2.31
PTPN12-202ENST00000407343 COL14A1Q05707 1796 aaKnown RBP0.62□□□□□ -2.31
PTPN12-202ENST00000407343 C2CD3Q4AC94 2353 aa0.62□□□□□ -2.31
PTPN12-202ENST00000407343 NRAPQ86VF7 1730 aa0.62□□□□□ -2.31
PTPN12-202ENST00000407343 RPL38P63173 70 aaKnown RBP0.62□□□□□ -2.31
PTPN12-202ENST00000407343 SMIM5Q71RC9 77 aa0.62□□□□□ -2.31
PTPN12-202ENST00000407343 USMG5Q96IX5 58 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms