RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TRRAPQ9Y4A5 3859 aa11.33□□□□□ -0.6
NUP50-203ENST00000407019 EGFEM1PQ0D2K5 195 aa11.33□□□□□ -0.6
NUP50-203ENST00000407019 IMUPQ9GZP8 106 aa11.33□□□□□ -0.6
NUP50-203ENST00000407019 C6orf99Q4VX62 202 aa11.32□□□□□ -0.6
NUP50-203ENST00000407019 KRTAP24-1Q3LI83 254 aa11.32□□□□□ -0.6
NUP50-203ENST00000407019 C6orf48Q9UBA6 75 aa11.31□□□□□ -0.6
NUP50-203ENST00000407019 C3orf56Q8N813 242 aa11.28□□□□□ -0.6
NUP50-203ENST00000407019 TMEM256-PLSCR3K7ERE1 68 aa11.28□□□□□ -0.6
NUP50-203ENST00000407019 RPL18AQ02543 176 aaKnown RBP11.28□□□□□ -0.6
NUP50-203ENST00000407019 JMJD7-PLA2G4BH0Y9G9 81 aa11.26□□□□□ -0.61
NUP50-203ENST00000407019 ZNF561-AS1K7EIQ3 104 aa11.26□□□□□ -0.61
NUP50-203ENST00000407019 IGLV6-57P01721 117 aa11.26□□□□□ -0.61
NUP50-203ENST00000407019 KRTAP26-1Q6PEX3 210 aa11.26□□□□□ -0.61
NUP50-203ENST00000407019 LINC00575Q6W349 94 aa11.26□□□□□ -0.61
NUP50-203ENST00000407019 ESRGQ1W209 222 aa11.26□□□□□ -0.61
NUP50-203ENST00000407019 HIGD2BQ4VC39 106 aa11.26□□□□□ -0.61
NUP50-203ENST00000407019 CAMK2N2Q96S95 79 aa11.25□□□□□ -0.61
NUP50-203ENST00000407019 FAM236AA0A1B0GUQ0 79 aa11.24□□□□□ -0.61
NUP50-203ENST00000407019 FAM236BA0A1B0GV22 79 aa11.24□□□□□ -0.61
NUP50-203ENST00000407019 XAGE1AQ9HD64 81 aa11.24□□□□□ -0.61
NUP50-203ENST00000407019 DEFB131BA0A096LNP1 70 aa11.23□□□□□ -0.61
NUP50-203ENST00000407019 LINC00846Q9NV44 126 aa11.23□□□□□ -0.61
NUP50-203ENST00000407019 hADV29S1A0JD25 119 aa11.23□□□□□ -0.61
NUP50-203ENST00000407019 CCKP06307 115 aa11.23□□□□□ -0.61
NUP50-203ENST00000407019 C11orf45Q8TAV5 145 aa11.23□□□□□ -0.61
NUP50-203ENST00000407019 CCDC179H3BU77 68 aa11.22□□□□□ -0.61
NUP50-203ENST00000407019 C15orf56Q8N910 161 aa11.21□□□□□ -0.61
NUP50-203ENST00000407019 TRBV10-3A0A0K0K1G6 114 aa11.21□□□□□ -0.62
NUP50-203ENST00000407019 LINC01556Q5JQF7 62 aa11.21□□□□□ -0.62
NUP50-203ENST00000407019 C1orf43Q9BWL3 253 aa11.21□□□□□ -0.62
NUP50-203ENST00000407019 TRAV23DV6A0A075B6W5 121 aa11.2□□□□□ -0.62
NUP50-203ENST00000407019 Q6JHZ5 121 aa11.2□□□□□ -0.62
NUP50-203ENST00000407019 Q6ZRU5 148 aa11.2□□□□□ -0.62
NUP50-203ENST00000407019 C2orf48Q96LS8 159 aa11.2□□□□□ -0.62
NUP50-203ENST00000407019 DIRC1Q969H9 104 aa11.19□□□□□ -0.62
NUP50-203ENST00000407019 F8P00451 2351 aa11.19□□□□□ -0.62
NUP50-203ENST00000407019 B5MCH6 92 aa11.18□□□□□ -0.62
NUP50-203ENST00000407019 IGKV2D-24A0A075B6R9 120 aa11.16□□□□□ -0.62
NUP50-203ENST00000407019 VPREB1P12018 145 aa11.16□□□□□ -0.62
NUP50-203ENST00000407019 NDUFC2-KCTD14E9PQ53 114 aa11.16□□□□□ -0.62
NUP50-203ENST00000407019 IGKV3D-7A0A0C4DH55 119 aa11.15□□□□□ -0.63
NUP50-203ENST00000407019 ZNF73O43830 326 aaPredicted RBP11.15□□□□□ -0.63
NUP50-203ENST00000407019 F8WDY8 70 aa11.14□□□□□ -0.63
NUP50-203ENST00000407019 H3BQ85 93 aa11.13□□□□□ -0.63
NUP50-203ENST00000407019 M0R378 163 aa11.13□□□□□ -0.63
NUP50-203ENST00000407019 Q6ZQY7 126 aa11.13□□□□□ -0.63
NUP50-203ENST00000407019 COX7BP24311 80 aa11.13□□□□□ -0.63
NUP50-203ENST00000407019 DNAH10OSP0CZ25 163 aa11.12□□□□□ -0.63
NUP50-203ENST00000407019 RBM3P98179 157 aaKnown RBP11.12□□□□□ -0.63
NUP50-203ENST00000407019 LAMTOR3Q9UHA4 124 aa11.12□□□□□ -0.63
NUP50-203ENST00000407019 CMYA5Q8N3K9 4069 aa11.12□□□□□ -0.63
NUP50-203ENST00000407019 TRBV7-6A0A0J9YX20 115 aa11.11□□□□□ -0.63
NUP50-203ENST00000407019 ELOF1P60002 83 aaKnown RBP11.11□□□□□ -0.63
NUP50-203ENST00000407019 HIST1H4AP62805 103 aaKnown RBP11.11□□□□□ -0.63
NUP50-203ENST00000407019 TRAV10A0A0B4J240 114 aa11.1□□□□□ -0.63
NUP50-203ENST00000407019 SYCNQ0VAF6 134 aa11.1□□□□□ -0.63
NUP50-203ENST00000407019 Q6ZQT0 140 aa11.1□□□□□ -0.63
NUP50-203ENST00000407019 SS18L2Q9UHA2 77 aa11.1□□□□□ -0.63
NUP50-203ENST00000407019 FBN1P35555 2871 aaKnown RBP11.09□□□□□ -0.63
NUP50-203ENST00000407019 LOC110117498A0A087WWA1 95 aa11.09□□□□□ -0.63
NUP50-203ENST00000407019 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.09□□□□□ -0.63
NUP50-203ENST00000407019 Q6ZRP5 223 aa11.09□□□□□ -0.63
NUP50-203ENST00000407019 ATP5EP2Q5VTU8 51 aa11.07□□□□□ -0.64
NUP50-203ENST00000407019 DNAH3Q8TD57 4116 aa11.06□□□□□ -0.64
NUP50-203ENST00000407019 ATOX1O00244 68 aa11.06□□□□□ -0.64
NUP50-203ENST00000407019 GHRHP01286 108 aa11.06□□□□□ -0.64
NUP50-203ENST00000407019 UBL5Q9BZL1 73 aa11.06□□□□□ -0.64
NUP50-203ENST00000407019 TENM3Q9P273 2699 aa11.06□□□□□ -0.64
NUP50-203ENST00000407019 ANK2Q01484 3957 aa11.06□□□□□ -0.64
NUP50-203ENST00000407019 DSCR8Q96T75 97 aa11.05□□□□□ -0.64
NUP50-203ENST00000407019 LINC00588Q9Y4M8 146 aa11.05□□□□□ -0.64
NUP50-203ENST00000407019 PRB2P02812 416 aaPredicted RBP11.05□□□□□ -0.64
NUP50-203ENST00000407019 C3orf22Q8N5N4 141 aa11.05□□□□□ -0.64
NUP50-203ENST00000407019 TM2D3Q9BRN9 247 aa11.05□□□□□ -0.64
NUP50-203ENST00000407019 A0A087WVE0 104 aa11.04□□□□□ -0.64
NUP50-203ENST00000407019 UQCRQO14949 82 aa11.04□□□□□ -0.64
NUP50-203ENST00000407019 PDE6GP18545 87 aa11.04□□□□□ -0.64
NUP50-203ENST00000407019 LINC00528Q8N1L1 170 aa11.03□□□□□ -0.64
NUP50-203ENST00000407019 PKD1L1Q8TDX9 2849 aa11.03□□□□□ -0.64
NUP50-203ENST00000407019 STAB1Q9NY15 2570 aa11.02□□□□□ -0.65
NUP50-203ENST00000407019 NKAPP1Q8N9T2 125 aa11.01□□□□□ -0.65
NUP50-203ENST00000407019 COX7CP15954 63 aa11□□□□□ -0.65
NUP50-203ENST00000407019 C9orf153Q5TBE3 101 aa11□□□□□ -0.65
NUP50-203ENST00000407019 MRAPQ8TCY5 172 aa11□□□□□ -0.65
NUP50-203ENST00000407019 K7EIL1 84 aa11□□□□□ -0.65
NUP50-203ENST00000407019 M0R2N4 97 aa11□□□□□ -0.65
NUP50-203ENST00000407019 TLX1NBP0CAT3 122 aa11□□□□□ -0.65
NUP50-203ENST00000407019 USP17L23D6RBM5 183 aa10.99□□□□□ -0.65
NUP50-203ENST00000407019 SERTAD4-AS1Q5TG53 156 aa10.99□□□□□ -0.65
NUP50-203ENST00000407019 RMI2Q96E14 147 aa10.98□□□□□ -0.65
NUP50-203ENST00000407019 TRBV7-4A0A0J9YYF1 115 aa10.97□□□□□ -0.65
NUP50-203ENST00000407019 KCNQ1DNQ9H478 68 aa10.97□□□□□ -0.65
NUP50-203ENST00000407019 CASC10Q5T4H9 136 aa10.97□□□□□ -0.65
NUP50-203ENST00000407019 C7orf33Q8WU49 177 aa10.97□□□□□ -0.65
NUP50-203ENST00000407019 PLA2G2DQ9UNK4 145 aa10.96□□□□□ -0.65
NUP50-203ENST00000407019 MAST4O15021 2626 aa10.96□□□□□ -0.66
NUP50-203ENST00000407019 Q6ZVQ6 151 aa10.95□□□□□ -0.66
NUP50-203ENST00000407019 FAM19A1Q7Z5A9 133 aa10.95□□□□□ -0.66
NUP50-203ENST00000407019 UPK3BQ9BT76 320 aa10.94□□□□□ -0.66
NUP50-203ENST00000407019 SERP2Q8N6R1 65 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms