RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 A0A1B0GU69 56 aa8.51□□□□□ -1.05
SMCR8-201ENST00000406438 TMEM254Q8TBM7 123 aa8.51□□□□□ -1.05
SMCR8-201ENST00000406438 FHL3Q13643 280 aa8.5□□□□□ -1.05
SMCR8-201ENST00000406438 Q6ZSN1 163 aa8.5□□□□□ -1.05
SMCR8-201ENST00000406438 SPACA4Q8TDM5 124 aa8.5□□□□□ -1.05
SMCR8-201ENST00000406438 ACYP2P14621 99 aa8.5□□□□□ -1.05
SMCR8-201ENST00000406438 Q6ZRU5 148 aa8.5□□□□□ -1.05
SMCR8-201ENST00000406438 PRO3102Q9H379 93 aa8.5□□□□□ -1.05
SMCR8-201ENST00000406438 COX8CQ7Z4L0 72 aa8.49□□□□□ -1.05
SMCR8-201ENST00000406438 C22orf24Q9Y442 160 aa8.49□□□□□ -1.05
SMCR8-201ENST00000406438 CR1P17927 2039 aa8.49□□□□□ -1.05
SMCR8-201ENST00000406438 SPAG11AQ6PDA7 123 aa8.49□□□□□ -1.05
SMCR8-201ENST00000406438 KRTAP10-9P60411 292 aa8.48□□□□□ -1.05
SMCR8-201ENST00000406438 MOBPQ13875 183 aa8.48□□□□□ -1.05
SMCR8-201ENST00000406438 FAM229AH3BQW9 127 aa8.47□□□□□ -1.05
SMCR8-201ENST00000406438 SMCR5Q8TEV8 140 aa8.47□□□□□ -1.05
SMCR8-201ENST00000406438 KIAA0087Q14695 138 aa8.45□□□□□ -1.06
SMCR8-201ENST00000406438 MDFIQ99750 246 aa8.45□□□□□ -1.06
SMCR8-201ENST00000406438 LINC00846Q9NV44 126 aa8.45□□□□□ -1.06
SMCR8-201ENST00000406438 URB1-AS1Q96HZ7 61 aa8.44□□□□□ -1.06
SMCR8-201ENST00000406438 COL4A2P08572 1712 aa8.44□□□□□ -1.06
SMCR8-201ENST00000406438 RPS28P62857 69 aaKnown RBP8.44□□□□□ -1.06
SMCR8-201ENST00000406438 C6orf48Q9UBA6 75 aa8.43□□□□□ -1.06
SMCR8-201ENST00000406438 LINC00313P59037 77 aa8.43□□□□□ -1.06
SMCR8-201ENST00000406438 SMIM29Q86T20 159 aa8.42□□□□□ -1.06
SMCR8-201ENST00000406438 LINC00310P59036 64 aa8.42□□□□□ -1.06
SMCR8-201ENST00000406438 Q9UF83 564 aa8.42□□□□□ -1.06
SMCR8-201ENST00000406438 CEP295Q9C0D2 2601 aa8.41□□□□□ -1.06
SMCR8-201ENST00000406438 TYMSOSQ8TAI1 123 aa8.4□□□□□ -1.06
SMCR8-201ENST00000406438 A0A1B0GW54 56 aa8.4□□□□□ -1.07
SMCR8-201ENST00000406438 SERTAD4-AS1Q5TG53 156 aa8.39□□□□□ -1.07
SMCR8-201ENST00000406438 SPATA3Q8NHX4 192 aa8.38□□□□□ -1.07
SMCR8-201ENST00000406438 KIF25-AS1Q9Y6Z4 181 aa8.37□□□□□ -1.07
SMCR8-201ENST00000406438 C16orf90A8MZG2 172 aa8.37□□□□□ -1.07
SMCR8-201ENST00000406438 LINC00167Q96N53 147 aa8.36□□□□□ -1.07
SMCR8-201ENST00000406438 C11orf72Q8NBR9 251 aa8.36□□□□□ -1.07
SMCR8-201ENST00000406438 LINC01546A6NGU7 62 aa8.35□□□□□ -1.07
SMCR8-201ENST00000406438 A0A096LNJ9 63 aa8.35□□□□□ -1.07
SMCR8-201ENST00000406438 IGLV5-39A0A0G2JS06 123 aa8.35□□□□□ -1.07
SMCR8-201ENST00000406438 H3BNG1 76 aa8.34□□□□□ -1.07
SMCR8-201ENST00000406438 CHTF8P0CG12 524 aa8.34□□□□□ -1.07
SMCR8-201ENST00000406438 ATP11AUNQ6ZP68 121 aa8.34□□□□□ -1.07
SMCR8-201ENST00000406438 IGHV3OR16-9A0A0B4J2B5 98 aa8.34□□□□□ -1.07
SMCR8-201ENST00000406438 Q6ZRP5 223 aa8.34□□□□□ -1.07
SMCR8-201ENST00000406438 TRAV22A0A0B4J277 110 aa8.34□□□□□ -1.07
SMCR8-201ENST00000406438 SPINT4Q6UDR6 99 aa8.34□□□□□ -1.07
SMCR8-201ENST00000406438 IGLV8-61A0A075B6I0 122 aa8.33□□□□□ -1.08
SMCR8-201ENST00000406438 A0A1W2PPR1 153 aa8.33□□□□□ -1.08
SMCR8-201ENST00000406438 H3BPC8 53 aa8.32□□□□□ -1.08
SMCR8-201ENST00000406438 Q8NBF4 154 aa8.32□□□□□ -1.08
SMCR8-201ENST00000406438 ELOF1P60002 83 aaKnown RBP8.32□□□□□ -1.08
SMCR8-201ENST00000406438 RTL8CO15255 209 aa8.32□□□□□ -1.08
SMCR8-201ENST00000406438 UTRNP46939 3433 aa8.31□□□□□ -1.08
SMCR8-201ENST00000406438 LINC00476Q8WZB0 136 aa8.31□□□□□ -1.08
SMCR8-201ENST00000406438 C5orf42Q9H799 3197 aa8.3□□□□□ -1.08
SMCR8-201ENST00000406438 J3QL48 77 aa8.3□□□□□ -1.08
SMCR8-201ENST00000406438 Q6ZRX8 168 aa8.3□□□□□ -1.08
SMCR8-201ENST00000406438 Q96NJ1 140 aa8.3□□□□□ -1.08
SMCR8-201ENST00000406438 PHF5AQ7RTV0 110 aaKnown RBP8.3□□□□□ -1.08
SMCR8-201ENST00000406438 C8orf87E5RJ46 101 aa8.3□□□□□ -1.08
SMCR8-201ENST00000406438 BCE1O60756 84 aa8.3□□□□□ -1.08
SMCR8-201ENST00000406438 EPM2AB3EWF7 344 aa8.29□□□□□ -1.08
SMCR8-201ENST00000406438 CEP350Q5VT06 3117 aa8.28□□□□□ -1.08
SMCR8-201ENST00000406438 LOC110117498A0A087WWA1 95 aa8.28□□□□□ -1.08
SMCR8-201ENST00000406438 FAM19A4Q96LR4 140 aa8.27□□□□□ -1.08
SMCR8-201ENST00000406438 Q6ZQT0 140 aa8.27□□□□□ -1.09
SMCR8-201ENST00000406438 CDIP1Q9H305 208 aa8.27□□□□□ -1.09
SMCR8-201ENST00000406438 LINC00315P59091 139 aa8.27□□□□□ -1.09
SMCR8-201ENST00000406438 IGLV5-45A0A087WSX0 123 aa8.25□□□□□ -1.09
SMCR8-201ENST00000406438 NBDYA0A0U1RRE5 68 aa8.25□□□□□ -1.09
SMCR8-201ENST00000406438 COX6B2Q6YFQ2 88 aa8.25□□□□□ -1.09
SMCR8-201ENST00000406438 RPL37AP61513 92 aaKnown RBP8.24□□□□□ -1.09
SMCR8-201ENST00000406438 AKAP13Q12802 2813 aa8.24□□□□□ -1.09
SMCR8-201ENST00000406438 PCNTO95613 3336 aa8.23□□□□□ -1.09
SMCR8-201ENST00000406438 GVQW2A0A096LPI5 108 aaPredicted RBP8.22□□□□□ -1.09
SMCR8-201ENST00000406438 SSBP3-AS1Q7Z2R9 100 aa8.22□□□□□ -1.09
SMCR8-201ENST00000406438 FAM218AQ96MZ4 157 aa8.21□□□□□ -1.1
SMCR8-201ENST00000406438 TRBV7-4A0A0J9YYF1 115 aa8.2□□□□□ -1.1
SMCR8-201ENST00000406438 LOC101927531A0A1B0GV80 90 aa8.2□□□□□ -1.1
SMCR8-201ENST00000406438 C10orf142B7Z368 130 aa8.2□□□□□ -1.1
SMCR8-201ENST00000406438 C4orf26Q17RF5 130 aa8.2□□□□□ -1.1
SMCR8-201ENST00000406438 EPG5Q9HCE0 2579 aa8.2□□□□□ -1.1
SMCR8-201ENST00000406438 A8MWP4 228 aa8.2□□□□□ -1.1
SMCR8-201ENST00000406438 LINC00588Q9Y4M8 146 aa8.19□□□□□ -1.1
SMCR8-201ENST00000406438 DNAH10OSP0CZ25 163 aa8.18□□□□□ -1.1
SMCR8-201ENST00000406438 TM2D3Q9BRN9 247 aa8.18□□□□□ -1.1
SMCR8-201ENST00000406438 Q8NAQ8 132 aa8.17□□□□□ -1.1
SMCR8-201ENST00000406438 ST20-AS1Q8NBB2 130 aa8.17□□□□□ -1.1
SMCR8-201ENST00000406438 CRIPTQ9P021 101 aa8.17□□□□□ -1.1
SMCR8-201ENST00000406438 WWC2-AS2Q96NR7 200 aa8.17□□□□□ -1.1
SMCR8-201ENST00000406438 LINC01600Q96MT4 127 aa8.16□□□□□ -1.1
SMCR8-201ENST00000406438 IGLV6-57P01721 117 aa8.15□□□□□ -1.1
SMCR8-201ENST00000406438 APLNQ9ULZ1 77 aa8.15□□□□□ -1.11
SMCR8-201ENST00000406438 CD164Q04900 197 aa8.14□□□□□ -1.11
SMCR8-201ENST00000406438 FAM168BA1KXE4 195 aa8.14□□□□□ -1.11
SMCR8-201ENST00000406438 MRPL34Q9BQ48 92 aaKnown RBP8.13□□□□□ -1.11
SMCR8-201ENST00000406438 WIPF1O43516 503 aa8.12□□□□□ -1.11
SMCR8-201ENST00000406438 SMCPP49901 116 aaPredicted RBP8.12□□□□□ -1.11
SMCR8-201ENST00000406438 UQCR11O14957 56 aa8.12□□□□□ -1.11
SMCR8-201ENST00000406438 K7EQZ3 153 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms