RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 CHTF8P0CG12 524 aa7.83□□□□□ -1.16
LINC00339-201ENST00000404210 C9orf129Q5T035 196 aaKnown RBP7.83□□□□□ -1.16
LINC00339-201ENST00000404210 ADAMTSL4-AS1Q5T5F5 129 aa7.83□□□□□ -1.16
LINC00339-201ENST00000404210 ARL17AQ8IVW1 177 aa7.83□□□□□ -1.16
LINC00339-201ENST00000404210 SPACA4Q8TDM5 124 aa7.83□□□□□ -1.16
LINC00339-201ENST00000404210 Q6ZVH6 145 aa7.82□□□□□ -1.16
LINC00339-201ENST00000404210 XAGE1AQ9HD64 81 aa7.82□□□□□ -1.16
LINC00339-201ENST00000404210 PLA2G2DQ9UNK4 145 aa7.82□□□□□ -1.16
LINC00339-201ENST00000404210 DNAH8Q96JB1 4490 aa7.82□□□□□ -1.16
LINC00339-201ENST00000404210 EPM2AB3EWF7 344 aa7.81□□□□□ -1.16
LINC00339-201ENST00000404210 DAND5Q8N907 189 aa7.81□□□□□ -1.16
LINC00339-201ENST00000404210 C12orf57Q99622 126 aa7.81□□□□□ -1.16
LINC00339-201ENST00000404210 SPANXDQ9BXN6 97 aa7.81□□□□□ -1.16
LINC00339-201ENST00000404210 SPANXB1Q9NS25 103 aaPredicted RBP7.81□□□□□ -1.16
LINC00339-201ENST00000404210 SPANXCQ9NY87 97 aa7.81□□□□□ -1.16
LINC00339-201ENST00000404210 HIGD1BQ9P298 99 aa7.81□□□□□ -1.16
LINC00339-201ENST00000404210 A0A087WYN8 130 aa7.8□□□□□ -1.16
LINC00339-201ENST00000404210 A0A1W2PNN7 141 aa7.8□□□□□ -1.16
LINC00339-201ENST00000404210 LINC00518Q8N0U6 118 aa7.8□□□□□ -1.16
LINC00339-201ENST00000404210 UQCR10Q9UDW1 63 aa7.8□□□□□ -1.16
LINC00339-201ENST00000404210 DYNC1H1Q14204 4646 aaKnown RBP7.79□□□□□ -1.16
LINC00339-201ENST00000404210 IFITM1P13164 125 aa7.79□□□□□ -1.16
LINC00339-201ENST00000404210 LINC00308Q8TCZ7 52 aa7.79□□□□□ -1.16
LINC00339-201ENST00000404210 COPS9Q8WXC6 57 aa7.79□□□□□ -1.16
LINC00339-201ENST00000404210 PPDPFQ9H3Y8 114 aa7.79□□□□□ -1.16
LINC00339-201ENST00000404210 PLAC8Q9NZF1 115 aa7.79□□□□□ -1.16
LINC00339-201ENST00000404210 RPL24P83731 157 aaKnown RBP7.78□□□□□ -1.16
LINC00339-201ENST00000404210 SRSF9Q13242 221 aaKnown RBP eCLIP7.78□□□□□ -1.16
LINC00339-201ENST00000404210 CIRBP-AS1Q8TBR5 109 aa7.78□□□□□ -1.16
LINC00339-201ENST00000404210 MIEN1Q9BRT3 115 aa7.78□□□□□ -1.16
LINC00339-201ENST00000404210 TP73-AS1Q9UF72 201 aa7.78□□□□□ -1.16
LINC00339-201ENST00000404210 LRP1BQ9NZR2 4599 aa7.78□□□□□ -1.16
LINC00339-201ENST00000404210 IGLV5-37A0A075B6J1 123 aa7.77□□□□□ -1.17
LINC00339-201ENST00000404210 FAM168BA1KXE4 195 aa7.77□□□□□ -1.17
LINC00339-201ENST00000404210 XGP55808 180 aa7.77□□□□□ -1.17
LINC00339-201ENST00000404210 SOSTDC1Q6X4U4 206 aa7.77□□□□□ -1.17
LINC00339-201ENST00000404210 C2orf91Q6ZV80 131 aa7.77□□□□□ -1.17
LINC00339-201ENST00000404210 SCXQ7RTU7 201 aa7.77□□□□□ -1.17
LINC00339-201ENST00000404210 KRTAP7-1Q8IUC3 87 aa7.77□□□□□ -1.17
LINC00339-201ENST00000404210 MUSTN1Q8IVN3 82 aa7.77□□□□□ -1.17
LINC00339-201ENST00000404210 CDK2AP2O75956 126 aa7.76□□□□□ -1.17
LINC00339-201ENST00000404210 NDUFC2O95298 119 aa7.76□□□□□ -1.17
LINC00339-201ENST00000404210 NPC2P61916 151 aa7.76□□□□□ -1.17
LINC00339-201ENST00000404210 SERTAD4-AS1Q5TG53 156 aa7.76□□□□□ -1.17
LINC00339-201ENST00000404210 PRO1933Q9H354 126 aa7.76□□□□□ -1.17
LINC00339-201ENST00000404210 C22orf24Q9Y442 160 aa7.76□□□□□ -1.17
LINC00339-201ENST00000404210 VPREB1P12018 145 aa7.75□□□□□ -1.17
LINC00339-201ENST00000404210 TAL2Q16559 108 aa7.75□□□□□ -1.17
LINC00339-201ENST00000404210 FAM19A5Q7Z5A7 132 aaPredicted RBP7.75□□□□□ -1.17
LINC00339-201ENST00000404210 HIST1H4GQ99525 98 aa7.75□□□□□ -1.17
LINC00339-201ENST00000404210 TSTD3H0UI37 97 aa7.73□□□□□ -1.17
LINC00339-201ENST00000404210 LBHQ53QV2 105 aaPredicted RBP7.73□□□□□ -1.17
LINC00339-201ENST00000404210 NKAPP1Q8N9T2 125 aa7.73□□□□□ -1.17
LINC00339-201ENST00000404210 Q8NDZ9 215 aa7.73□□□□□ -1.17
LINC00339-201ENST00000404210 PKHD1P08F94 4074 aa7.73□□□□□ -1.17
LINC00339-201ENST00000404210 EPPK1P58107 5090 aaKnown RBP7.72□□□□□ -1.17
LINC00339-201ENST00000404210 TRBV10-2A0A0K0K1G8 114 aa7.72□□□□□ -1.17
LINC00339-201ENST00000404210 M0QXV9 152 aa7.72□□□□□ -1.17
LINC00339-201ENST00000404210 M0R378 163 aa7.72□□□□□ -1.17
LINC00339-201ENST00000404210 PRR3P79522 188 aaKnown RBP7.72□□□□□ -1.17
LINC00339-201ENST00000404210 PHF5AQ7RTV0 110 aaKnown RBP7.72□□□□□ -1.17
LINC00339-201ENST00000404210 MRPL55Q7Z7F7 128 aaKnown RBP7.72□□□□□ -1.17
LINC00339-201ENST00000404210 HNRNPA3P51991 378 aaKnown RBP7.71□□□□□ -1.18
LINC00339-201ENST00000404210 HAMPP81172 84 aa7.71□□□□□ -1.18
LINC00339-201ENST00000404210 LINC00167Q96N53 147 aa7.71□□□□□ -1.18
LINC00339-201ENST00000404210 CEND1Q8N111 149 aa7.7□□□□□ -1.18
LINC00339-201ENST00000404210 C7orf33Q8WU49 177 aa7.7□□□□□ -1.18
LINC00339-201ENST00000404210 A4D1N5 150 aa7.69□□□□□ -1.18
LINC00339-201ENST00000404210 HSD52Q0P140 79 aa7.69□□□□□ -1.18
LINC00339-201ENST00000404210 IGLV1-50A0A075B6I6 118 aa7.68□□□□□ -1.18
LINC00339-201ENST00000404210 IGKV2-28A0A075B6P5 120 aa7.68□□□□□ -1.18
LINC00339-201ENST00000404210 NCR3O14931 201 aa7.68□□□□□ -1.18
LINC00339-201ENST00000404210 IGKV2D-28P01615 120 aa7.68□□□□□ -1.18
LINC00339-201ENST00000404210 UBE2BP63146 152 aa7.67□□□□□ -1.18
LINC00339-201ENST00000404210 APOBP04114 4563 aaKnown RBP7.66□□□□□ -1.18
LINC00339-201ENST00000404210 GAGE10A6NGK3 116 aa7.66□□□□□ -1.18
LINC00339-201ENST00000404210 RPL37AP8A6NKH3 93 aa7.66□□□□□ -1.18
LINC00339-201ENST00000404210 SMR3BP02814 79 aaPredicted RBP7.66□□□□□ -1.18
LINC00339-201ENST00000404210 S100A7L2Q5SY68 101 aa7.66□□□□□ -1.18
LINC00339-201ENST00000404210 TMEM126AQ9H061 195 aa7.66□□□□□ -1.18
LINC00339-201ENST00000404210 TRAV13-2A0A0B4J235 113 aa7.65□□□□□ -1.18
LINC00339-201ENST00000404210 IGLV6-57P01721 117 aa7.65□□□□□ -1.18
LINC00339-201ENST00000404210 DDTP30046 118 aa7.65□□□□□ -1.18
LINC00339-201ENST00000404210 CTAG1AP78358 180 aa7.65□□□□□ -1.18
LINC00339-201ENST00000404210 KRTAP11-1Q8IUC1 163 aa7.65□□□□□ -1.18
LINC00339-201ENST00000404210 LINC00337Q8N6G1 96 aa7.65□□□□□ -1.18
LINC00339-201ENST00000404210 TRBV10-3A0A0K0K1G6 114 aa7.64□□□□□ -1.19
LINC00339-201ENST00000404210 CFC1BP0CG36 223 aa7.64□□□□□ -1.19
LINC00339-201ENST00000404210 CFC1P0CG37 223 aa7.64□□□□□ -1.19
LINC00339-201ENST00000404210 OR13C6PQ8NH95 151 aa7.64□□□□□ -1.19
LINC00339-201ENST00000404210 KCNQ1DNQ9H478 68 aa7.64□□□□□ -1.19
LINC00339-201ENST00000404210 CBY1Q9Y3M2 126 aa7.64□□□□□ -1.19
LINC00339-201ENST00000404210 FXYD2P54710 66 aa7.63□□□□□ -1.19
LINC00339-201ENST00000404210 PSORS1C2Q9UIG4 136 aa7.63□□□□□ -1.19
LINC00339-201ENST00000404210 A6NDN8 102 aa7.62□□□□□ -1.19
LINC00339-201ENST00000404210 FAM229AH3BQW9 127 aa7.62□□□□□ -1.19
LINC00339-201ENST00000404210 PRYO14603 147 aa7.62□□□□□ -1.19
LINC00339-201ENST00000404210 BVES-AS1Q5T3Y7 98 aa7.62□□□□□ -1.19
LINC00339-201ENST00000404210 XP32Q5T750 250 aa7.62□□□□□ -1.19
LINC00339-201ENST00000404210 A0A0B4J2C4 111 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms