RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 CHCHD10Q8WYQ3 142 aaPredicted RBP10.83□□□□□ -0.68
CHRFAM7A-203ENST00000401522 OBSCN-AS1Q96MR7 158 aa10.83□□□□□ -0.68
CHRFAM7A-203ENST00000401522 NDUFC2O95298 119 aa10.82□□□□□ -0.68
CHRFAM7A-203ENST00000401522 TGP01266 2768 aa10.82□□□□□ -0.68
CHRFAM7A-203ENST00000401522 REG3AQ06141 175 aa10.82□□□□□ -0.68
CHRFAM7A-203ENST00000401522 ANGP03950 147 aaKnown RBP10.81□□□□□ -0.68
CHRFAM7A-203ENST00000401522 A0A1B0GX51 115 aa10.8□□□□□ -0.68
CHRFAM7A-203ENST00000401522 CCDC179H3BU77 68 aa10.8□□□□□ -0.68
CHRFAM7A-203ENST00000401522 B5MCH6 92 aa10.8□□□□□ -0.68
CHRFAM7A-203ENST00000401522 DEFB131BA0A096LNP1 70 aa10.79□□□□□ -0.68
CHRFAM7A-203ENST00000401522 TRAV10A0A0B4J240 114 aa10.79□□□□□ -0.68
CHRFAM7A-203ENST00000401522 HTN3P15516 51 aa10.79□□□□□ -0.68
CHRFAM7A-203ENST00000401522 ORMDL1Q9P0S3 153 aa10.79□□□□□ -0.68
CHRFAM7A-203ENST00000401522 LINC00167Q96N53 147 aa10.78□□□□□ -0.68
CHRFAM7A-203ENST00000401522 KLK5Q9Y337 293 aaPredicted RBP10.78□□□□□ -0.68
CHRFAM7A-203ENST00000401522 IGLV10-54A0A075B6I4 117 aa10.77□□□□□ -0.69
CHRFAM7A-203ENST00000401522 FAM236AA0A1B0GUQ0 79 aa10.77□□□□□ -0.69
CHRFAM7A-203ENST00000401522 FAM236BA0A1B0GV22 79 aa10.77□□□□□ -0.69
CHRFAM7A-203ENST00000401522 MUC7Q8TAX7 377 aa10.77□□□□□ -0.69
CHRFAM7A-203ENST00000401522 TMEM126AQ9H061 195 aa10.77□□□□□ -0.69
CHRFAM7A-203ENST00000401522 C14orf132Q9NPU4 83 aa10.77□□□□□ -0.69
CHRFAM7A-203ENST00000401522 Q8N3U1 123 aa10.76□□□□□ -0.69
CHRFAM7A-203ENST00000401522 C9orf129Q5T035 196 aaKnown RBP10.76□□□□□ -0.69
CHRFAM7A-203ENST00000401522 LELP1Q5T871 98 aa10.76□□□□□ -0.69
CHRFAM7A-203ENST00000401522 H3BNG1 76 aa10.74□□□□□ -0.69
CHRFAM7A-203ENST00000401522 SLPIP03973 132 aa10.74□□□□□ -0.69
CHRFAM7A-203ENST00000401522 WWC2-AS2Q96NR7 200 aa10.74□□□□□ -0.69
CHRFAM7A-203ENST00000401522 PRR3P79522 188 aaKnown RBP10.74□□□□□ -0.69
CHRFAM7A-203ENST00000401522 Q8N814 137 aa10.74□□□□□ -0.69
CHRFAM7A-203ENST00000401522 SS18L2Q9UHA2 77 aa10.74□□□□□ -0.69
CHRFAM7A-203ENST00000401522 NCR3O14931 201 aa10.73□□□□□ -0.69
CHRFAM7A-203ENST00000401522 SPAG11BQ08648 103 aa10.72□□□□□ -0.69
CHRFAM7A-203ENST00000401522 C9orf116Q5BN46 136 aaPredicted RBP10.72□□□□□ -0.69
CHRFAM7A-203ENST00000401522 PRR34Q9NV39 138 aa10.71□□□□□ -0.69
CHRFAM7A-203ENST00000401522 NUPR2A6NF83 97 aa10.7□□□□□ -0.7
CHRFAM7A-203ENST00000401522 JMJD7-PLA2G4BH0Y9G9 81 aa10.7□□□□□ -0.7
CHRFAM7A-203ENST00000401522 Q6JHZ5 121 aa10.7□□□□□ -0.7
CHRFAM7A-203ENST00000401522 TMEM256-PLSCR3K7ERE1 68 aa10.7□□□□□ -0.7
CHRFAM7A-203ENST00000401522 DNAH7Q8WXX0 4024 aa10.7□□□□□ -0.7
CHRFAM7A-203ENST00000401522 CCKP06307 115 aa10.68□□□□□ -0.7
CHRFAM7A-203ENST00000401522 S100A7L2Q5SY68 101 aa10.68□□□□□ -0.7
CHRFAM7A-203ENST00000401522 LINC00846Q9NV44 126 aa10.68□□□□□ -0.7
CHRFAM7A-203ENST00000401522 CSMD3Q7Z407 3707 aa10.68□□□□□ -0.7
CHRFAM7A-203ENST00000401522 UNQ6190/PRO20217Q6UXQ8 127 aa10.68□□□□□ -0.7
CHRFAM7A-203ENST00000401522 C6orf99Q4VX62 202 aa10.67□□□□□ -0.7
CHRFAM7A-203ENST00000401522 C10orf25Q5T742 122 aa10.67□□□□□ -0.7
CHRFAM7A-203ENST00000401522 Q8NDZ9 215 aa10.67□□□□□ -0.7
CHRFAM7A-203ENST00000401522 HIST1H4AP62805 103 aaKnown RBP10.66□□□□□ -0.7
CHRFAM7A-203ENST00000401522 C6orf223Q8N319 242 aa10.66□□□□□ -0.7
CHRFAM7A-203ENST00000401522 KLK12Q9UKR0 248 aa10.66□□□□□ -0.7
CHRFAM7A-203ENST00000401522 GVQW2A0A096LPI5 108 aaPredicted RBP10.66□□□□□ -0.7
CHRFAM7A-203ENST00000401522 ENHOQ6UWT2 76 aa10.65□□□□□ -0.7
CHRFAM7A-203ENST00000401522 LINC00575Q6W349 94 aa10.65□□□□□ -0.7
CHRFAM7A-203ENST00000401522 LYPD5Q6UWN5 251 aa10.64□□□□□ -0.71
CHRFAM7A-203ENST00000401522 C3orf22Q8N5N4 141 aa10.64□□□□□ -0.71
CHRFAM7A-203ENST00000401522 APLNQ9ULZ1 77 aa10.64□□□□□ -0.71
CHRFAM7A-203ENST00000401522 UQCRQO14949 82 aa10.63□□□□□ -0.71
CHRFAM7A-203ENST00000401522 IGLV6-57P01721 117 aa10.63□□□□□ -0.71
CHRFAM7A-203ENST00000401522 C3orf84H3BNL1 204 aa10.62□□□□□ -0.71
CHRFAM7A-203ENST00000401522 ATOX1O00244 68 aa10.62□□□□□ -0.71
CHRFAM7A-203ENST00000401522 IGKV3D-7A0A0C4DH55 119 aa10.62□□□□□ -0.71
CHRFAM7A-203ENST00000401522 LINC00526Q96FQ7 95 aa10.61□□□□□ -0.71
CHRFAM7A-203ENST00000401522 hADV29S1A0JD25 119 aa10.6□□□□□ -0.71
CHRFAM7A-203ENST00000401522 CASC10Q5T4H9 136 aa10.6□□□□□ -0.71
CHRFAM7A-203ENST00000401522 DYNC2H1Q8NCM8 4307 aaKnown RBP10.6□□□□□ -0.71
CHRFAM7A-203ENST00000401522 ATP5EP2Q5VTU8 51 aa10.6□□□□□ -0.71
CHRFAM7A-203ENST00000401522 H3BQ85 93 aa10.59□□□□□ -0.71
CHRFAM7A-203ENST00000401522 RPL18AQ02543 176 aaKnown RBP10.59□□□□□ -0.71
CHRFAM7A-203ENST00000401522 ESRGQ1W209 222 aa10.59□□□□□ -0.71
CHRFAM7A-203ENST00000401522 C9orf153Q5TBE3 101 aa10.59□□□□□ -0.71
CHRFAM7A-203ENST00000401522 C6orf48Q9UBA6 75 aa10.59□□□□□ -0.71
CHRFAM7A-203ENST00000401522 ZNF561-AS1K7EIQ3 104 aa10.58□□□□□ -0.72
CHRFAM7A-203ENST00000401522 COX7CP15954 63 aa10.58□□□□□ -0.72
CHRFAM7A-203ENST00000401522 STARD9Q9P2P6 4700 aa10.58□□□□□ -0.72
CHRFAM7A-203ENST00000401522 TENM2Q9NT68 2774 aa10.57□□□□□ -0.72
CHRFAM7A-203ENST00000401522 C2orf48Q96LS8 159 aa10.56□□□□□ -0.72
CHRFAM7A-203ENST00000401522 LOC110117498A0A087WWA1 95 aa10.55□□□□□ -0.72
CHRFAM7A-203ENST00000401522 TRAV23DV6A0A075B6W5 121 aa10.54□□□□□ -0.72
CHRFAM7A-203ENST00000401522 RBM3P98179 157 aaKnown RBP10.54□□□□□ -0.72
CHRFAM7A-203ENST00000401522 DIRC1Q969H9 104 aa10.54□□□□□ -0.72
CHRFAM7A-203ENST00000401522 LINC00588Q9Y4M8 146 aa10.54□□□□□ -0.72
CHRFAM7A-203ENST00000401522 TRBV10-3A0A0K0K1G6 114 aa10.54□□□□□ -0.72
CHRFAM7A-203ENST00000401522 WFDC10BQ8IUB3 73 aa10.53□□□□□ -0.72
CHRFAM7A-203ENST00000401522 UBL5Q9BZL1 73 aa10.53□□□□□ -0.72
CHRFAM7A-203ENST00000401522 Q6ZQT0 140 aa10.52□□□□□ -0.72
CHRFAM7A-203ENST00000401522 CAMK2N2Q96S95 79 aa10.52□□□□□ -0.72
CHRFAM7A-203ENST00000401522 XAGE1AQ9HD64 81 aa10.52□□□□□ -0.72
CHRFAM7A-203ENST00000401522 KRTAP26-1Q6PEX3 210 aa10.52□□□□□ -0.73
CHRFAM7A-203ENST00000401522 UPK3BQ9BT76 320 aa10.52□□□□□ -0.73
CHRFAM7A-203ENST00000401522 LAMTOR3Q9UHA4 124 aa10.52□□□□□ -0.73
CHRFAM7A-203ENST00000401522 A0A087WVE0 104 aa10.51□□□□□ -0.73
CHRFAM7A-203ENST00000401522 TRBV7-6A0A0J9YX20 115 aa10.51□□□□□ -0.73
CHRFAM7A-203ENST00000401522 CRYGAP11844 174 aa10.51□□□□□ -0.73
CHRFAM7A-203ENST00000401522 SVIPQ8NHG7 77 aa10.51□□□□□ -0.73
CHRFAM7A-203ENST00000401522 USP17L23D6RBM5 183 aa10.5□□□□□ -0.73
CHRFAM7A-203ENST00000401522 PDE6GP18545 87 aa10.5□□□□□ -0.73
CHRFAM7A-203ENST00000401522 Q6ZQY7 126 aa10.5□□□□□ -0.73
CHRFAM7A-203ENST00000401522 PLECQ15149 4684 aaKnown RBP10.5□□□□□ -0.73
CHRFAM7A-203ENST00000401522 ZNF73O43830 326 aaPredicted RBP10.5□□□□□ -0.73
CHRFAM7A-203ENST00000401522 GHRHP01286 108 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms