RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 Q8IZM0 81 aa4.58□□□□□ -1.68
CSNK2A1-204ENST00000400227 NOTCH2Q04721 2471 aa4.58□□□□□ -1.68
CSNK2A1-204ENST00000400227 TRAV26-1A0A087WT03 109 aa4.57□□□□□ -1.68
CSNK2A1-204ENST00000400227 ACYP1P07311 99 aa4.57□□□□□ -1.68
CSNK2A1-204ENST00000400227 PFN2P35080 140 aa4.57□□□□□ -1.68
CSNK2A1-204ENST00000400227 XCL1P47992 114 aa4.57□□□□□ -1.68
CSNK2A1-204ENST00000400227 NDUFV3P56181 108 aaKnown RBP4.57□□□□□ -1.68
CSNK2A1-204ENST00000400227 TTC32Q5I0X7 151 aa4.57□□□□□ -1.68
CSNK2A1-204ENST00000400227 FN1P02751 2386 aaKnown RBP4.57□□□□□ -1.68
CSNK2A1-204ENST00000400227 A0A096LPF7 62 aa4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 H0YGX0 51 aa4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 KRTAP10-7P60409 375 aaPredicted RBP4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 KIAA0087Q14695 138 aa4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 C6orf226Q5I0X4 101 aa4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 SDIM1Q6ZPB5 146 aa4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 ANAPC13Q9BS18 74 aa4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 Q9HAA7 133 aa4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 HIVEP2P31629 2446 aa4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 TRBV7-7A0A0K0K1E9 115 aa4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 APOC4P55056 127 aa4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 KRTAP10-6P60371 365 aaPredicted RBP4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 DEFB135Q30KP9 77 aa4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 CLPSL2Q6UWE3 100 aa4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 CD164L2Q6UWJ8 174 aa4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 LINC00269Q8N2A0 174 aa4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 C11orf68Q9H3H3 251 aaKnown RBP4.56□□□□□ -1.68
CSNK2A1-204ENST00000400227 DEFB4AO15263 64 aa4.55□□□□□ -1.68
CSNK2A1-204ENST00000400227 Q8NAQ8 132 aa4.55□□□□□ -1.68
CSNK2A1-204ENST00000400227 SMCR5Q8TEV8 140 aa4.55□□□□□ -1.68
CSNK2A1-204ENST00000400227 CHCHD10Q8WYQ3 142 aaPredicted RBP4.55□□□□□ -1.68
CSNK2A1-204ENST00000400227 OBSCN-AS1Q96MR7 158 aa4.55□□□□□ -1.68
CSNK2A1-204ENST00000400227 CELA1Q9UNI1 258 aa4.55□□□□□ -1.68
CSNK2A1-204ENST00000400227 VWFP04275 2813 aa4.55□□□□□ -1.68
CSNK2A1-204ENST00000400227 INAFM2P0DMQ5 153 aa4.54□□□□□ -1.68
CSNK2A1-204ENST00000400227 CXCL5P42830 114 aa4.54□□□□□ -1.68
CSNK2A1-204ENST00000400227 DAD1P61803 113 aa4.54□□□□□ -1.68
CSNK2A1-204ENST00000400227 LINC00167Q96N53 147 aa4.54□□□□□ -1.68
CSNK2A1-204ENST00000400227 NDUFC2O95298 119 aa4.53□□□□□ -1.68
CSNK2A1-204ENST00000400227 ATP5G1P05496 136 aa4.53□□□□□ -1.68
CSNK2A1-204ENST00000400227 MIFP14174 115 aa4.53□□□□□ -1.68
CSNK2A1-204ENST00000400227 REG3AQ06141 175 aa4.53□□□□□ -1.68
CSNK2A1-204ENST00000400227 COX17Q14061 63 aa4.53□□□□□ -1.68
CSNK2A1-204ENST00000400227 C9orf129Q5T035 196 aaKnown RBP4.53□□□□□ -1.68
CSNK2A1-204ENST00000400227 LINC00643Q86TS7 51 aa4.53□□□□□ -1.68
CSNK2A1-204ENST00000400227 OR13C6PQ8NH95 151 aa4.53□□□□□ -1.68
CSNK2A1-204ENST00000400227 NBEAL2Q6ZNJ1 2754 aa4.53□□□□□ -1.68
CSNK2A1-204ENST00000400227 LECT2O14960 151 aa4.52□□□□□ -1.69
CSNK2A1-204ENST00000400227 DNAL4O96015 105 aa4.52□□□□□ -1.69
CSNK2A1-204ENST00000400227 ANGP03950 147 aaKnown RBP4.52□□□□□ -1.69
CSNK2A1-204ENST00000400227 LELP1Q5T871 98 aa4.52□□□□□ -1.69
CSNK2A1-204ENST00000400227 IMUPQ9GZP8 106 aa4.52□□□□□ -1.69
CSNK2A1-204ENST00000400227 KLK5Q9Y337 293 aaPredicted RBP4.52□□□□□ -1.69
CSNK2A1-204ENST00000400227 IGLV10-54A0A075B6I4 117 aa4.51□□□□□ -1.69
CSNK2A1-204ENST00000400227 IGLV9-49A0A0B4J1Y8 123 aa4.51□□□□□ -1.69
CSNK2A1-204ENST00000400227 CCDC179H3BU77 68 aa4.51□□□□□ -1.69
CSNK2A1-204ENST00000400227 SPART-AS1P0CW21 52 aa4.51□□□□□ -1.69
CSNK2A1-204ENST00000400227 PRR3P79522 188 aaKnown RBP4.51□□□□□ -1.69
CSNK2A1-204ENST00000400227 Q8NDZ9 215 aa4.51□□□□□ -1.69
CSNK2A1-204ENST00000400227 WFDC9Q8NEX5 89 aa4.51□□□□□ -1.69
CSNK2A1-204ENST00000400227 A0A1B0GX51 115 aa4.5□□□□□ -1.69
CSNK2A1-204ENST00000400227 C9orf116Q5BN46 136 aaPredicted RBP4.5□□□□□ -1.69
CSNK2A1-204ENST00000400227 NOTCH2NLQ7Z3S9 236 aa4.5□□□□□ -1.69
CSNK2A1-204ENST00000400227 PRR34Q9NV39 138 aa4.5□□□□□ -1.69
CSNK2A1-204ENST00000400227 CMYA5Q8N3K9 4069 aa4.5□□□□□ -1.69
CSNK2A1-204ENST00000400227 OTOGQ6ZRI0 2925 aa4.5□□□□□ -1.69
CSNK2A1-204ENST00000400227 NSD1Q96L73 2696 aaPredicted RBP4.5□□□□□ -1.69
CSNK2A1-204ENST00000400227 SPAG11BQ08648 103 aa4.49□□□□□ -1.69
CSNK2A1-204ENST00000400227 UNQ6190/PRO20217Q6UXQ8 127 aa4.49□□□□□ -1.69
CSNK2A1-204ENST00000400227 MUC7Q8TAX7 377 aa4.49□□□□□ -1.69
CSNK2A1-204ENST00000400227 C14orf132Q9NPU4 83 aa4.49□□□□□ -1.69
CSNK2A1-204ENST00000400227 ORMDL1Q9P0S3 153 aa4.49□□□□□ -1.69
CSNK2A1-204ENST00000400227 TENM1Q9UKZ4 2725 aa4.49□□□□□ -1.69
CSNK2A1-204ENST00000400227 A0A0J9YWU9 116 aa4.49□□□□□ -1.69
CSNK2A1-204ENST00000400227 NCR3O14931 201 aa4.49□□□□□ -1.69
CSNK2A1-204ENST00000400227 HTN3P15516 51 aa4.49□□□□□ -1.69
CSNK2A1-204ENST00000400227 ENHOQ6UWT2 76 aa4.49□□□□□ -1.69
CSNK2A1-204ENST00000400227 C6orf223Q8N319 242 aa4.49□□□□□ -1.69
CSNK2A1-204ENST00000400227 Q8N814 137 aa4.49□□□□□ -1.69
CSNK2A1-204ENST00000400227 TMEM126AQ9H061 195 aa4.49□□□□□ -1.69
CSNK2A1-204ENST00000400227 GVQW2A0A096LPI5 108 aaPredicted RBP4.48□□□□□ -1.69
CSNK2A1-204ENST00000400227 LYPD5Q6UWN5 251 aa4.48□□□□□ -1.69
CSNK2A1-204ENST00000400227 KLK12Q9UKR0 248 aa4.48□□□□□ -1.69
CSNK2A1-204ENST00000400227 DNAH3Q8TD57 4116 aa4.47□□□□□ -1.69
CSNK2A1-204ENST00000400227 FAM236AA0A1B0GUQ0 79 aa4.47□□□□□ -1.69
CSNK2A1-204ENST00000400227 FAM236BA0A1B0GV22 79 aa4.47□□□□□ -1.69
CSNK2A1-204ENST00000400227 Q6JHZ5 121 aa4.47□□□□□ -1.69
CSNK2A1-204ENST00000400227 LINC00575Q6W349 94 aa4.47□□□□□ -1.69
CSNK2A1-204ENST00000400227 TEP1Q99973 2627 aaKnown RBP4.46□□□□□ -1.69
CSNK2A1-204ENST00000400227 IGLV6-57P01721 117 aa4.46□□□□□ -1.7
CSNK2A1-204ENST00000400227 CCKP06307 115 aa4.46□□□□□ -1.7
CSNK2A1-204ENST00000400227 HIST1H4AP62805 103 aaKnown RBP4.46□□□□□ -1.7
CSNK2A1-204ENST00000400227 C6orf99Q4VX62 202 aa4.46□□□□□ -1.7
CSNK2A1-204ENST00000400227 KRTAP26-1Q6PEX3 210 aa4.46□□□□□ -1.7
CSNK2A1-204ENST00000400227 LINC00526Q96FQ7 95 aa4.46□□□□□ -1.7
CSNK2A1-204ENST00000400227 LINC00846Q9NV44 126 aa4.46□□□□□ -1.7
CSNK2A1-204ENST00000400227 SS18L2Q9UHA2 77 aa4.46□□□□□ -1.7
CSNK2A1-204ENST00000400227 HIVEP1P15822 2718 aa4.45□□□□□ -1.7
CSNK2A1-204ENST00000400227 H3BNG1 76 aa4.45□□□□□ -1.7
CSNK2A1-204ENST00000400227 TMEM256-PLSCR3K7ERE1 68 aa4.45□□□□□ -1.7
CSNK2A1-204ENST00000400227 RETNQ9HD89 108 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms