RNA–Protein interactions for RNA: ENST00000400122.7

SMARCE1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-204ENST00000400122 CHTOPQ9Y3Y2 248 aaKnown RBP8.48□□□□□ -1.05
SMARCE1-204ENST00000400122 LINC00587B1AMM8 73 aa8.47□□□□□ -1.05
SMARCE1-204ENST00000400122 M0R378 163 aa8.47□□□□□ -1.05
SMARCE1-204ENST00000400122 TMEM223A0PJW6 202 aa8.46□□□□□ -1.06
SMARCE1-204ENST00000400122 HERV-K104P63124 156 aa8.46□□□□□ -1.06
SMARCE1-204ENST00000400122 PLEKHB2Q96CS7 222 aa8.46□□□□□ -1.06
SMARCE1-204ENST00000400122 IGKV2D-26A0A0A0MRZ7 120 aa8.45□□□□□ -1.06
SMARCE1-204ENST00000400122 PMCHL1Q16048 86 aa8.45□□□□□ -1.06
SMARCE1-204ENST00000400122 LINC00304Q8N9R0 145 aa8.45□□□□□ -1.06
SMARCE1-204ENST00000400122 IFI27L1Q96BM0 104 aa8.45□□□□□ -1.06
SMARCE1-204ENST00000400122 FAM19A1Q7Z5A9 133 aa8.44□□□□□ -1.06
SMARCE1-204ENST00000400122 A0A0U1RQV1 116 aa8.43□□□□□ -1.06
SMARCE1-204ENST00000400122 SCO1O75880 301 aa8.43□□□□□ -1.06
SMARCE1-204ENST00000400122 TSPAN13O95857 204 aa8.43□□□□□ -1.06
SMARCE1-204ENST00000400122 Q8NDZ9 215 aa8.43□□□□□ -1.06
SMARCE1-204ENST00000400122 LOC107984156A0A0G2JMH3 177 aa8.42□□□□□ -1.06
SMARCE1-204ENST00000400122 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
SMARCE1-204ENST00000400122 SPRR1AP35321 89 aa8.42□□□□□ -1.06
SMARCE1-204ENST00000400122 LINC00158P58513 81 aa8.42□□□□□ -1.06
SMARCE1-204ENST00000400122 PRLHP81277 87 aa8.42□□□□□ -1.06
SMARCE1-204ENST00000400122 SPAG11AQ6PDA7 123 aa8.42□□□□□ -1.06
SMARCE1-204ENST00000400122 ARL17AQ8IVW1 177 aa8.42□□□□□ -1.06
SMARCE1-204ENST00000400122 LINC00337Q8N6G1 96 aa8.42□□□□□ -1.06
SMARCE1-204ENST00000400122 TPRXLQ17RH7 258 aa8.41□□□□□ -1.06
SMARCE1-204ENST00000400122 CBLN2Q8IUK8 224 aa8.41□□□□□ -1.06
SMARCE1-204ENST00000400122 ANAPC11Q9NYG5 84 aa8.41□□□□□ -1.06
SMARCE1-204ENST00000400122 ZNF706Q9Y5V0 76 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-204ENST00000400122 PRYO14603 147 aa8.4□□□□□ -1.06
SMARCE1-204ENST00000400122 KCNQ1DNQ9H478 68 aa8.4□□□□□ -1.06
SMARCE1-204ENST00000400122 MAP1LC3CQ9BXW4 147 aa8.39□□□□□ -1.07
SMARCE1-204ENST00000400122 MYMXA0A1B0GTQ4 84 aa8.38□□□□□ -1.07
SMARCE1-204ENST00000400122 KRTAP4-16G5E9R7 235 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1-204ENST00000400122 ATP6V1G1O75348 118 aa8.38□□□□□ -1.07
SMARCE1-204ENST00000400122 HSBP1O75506 76 aa8.38□□□□□ -1.07
SMARCE1-204ENST00000400122 SPRR4Q96PI1 79 aa8.38□□□□□ -1.07
SMARCE1-204ENST00000400122 TRBV10-2A0A0K0K1G8 114 aa8.36□□□□□ -1.07
SMARCE1-204ENST00000400122 SMIM13P0DJ93 91 aa8.36□□□□□ -1.07
SMARCE1-204ENST00000400122 PLNP26678 52 aa8.36□□□□□ -1.07
SMARCE1-204ENST00000400122 BOD1L2Q8IYS8 172 aa8.36□□□□□ -1.07
SMARCE1-204ENST00000400122 MIR7-3HGQ8N6C7 128 aa8.36□□□□□ -1.07
SMARCE1-204ENST00000400122 HIGD2AQ9BW72 106 aa8.36□□□□□ -1.07
SMARCE1-204ENST00000400122 NDUFA12Q9UI09 145 aa8.36□□□□□ -1.07
SMARCE1-204ENST00000400122 S100A12P80511 92 aa8.35□□□□□ -1.07
SMARCE1-204ENST00000400122 MEIG1Q5JSS6 88 aa8.35□□□□□ -1.07
SMARCE1-204ENST00000400122 FP248Q71RG6 208 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-204ENST00000400122 LEPROTL1O95214 131 aa8.34□□□□□ -1.07
SMARCE1-204ENST00000400122 NMUP48645 174 aa8.34□□□□□ -1.07
SMARCE1-204ENST00000400122 LEPROTO15243 131 aa8.33□□□□□ -1.08
SMARCE1-204ENST00000400122 LINC00483Q53H64 154 aa8.33□□□□□ -1.08
SMARCE1-204ENST00000400122 IGLV7-46A0A075B6I9 117 aa8.32□□□□□ -1.08
SMARCE1-204ENST00000400122 FAM19A2Q8N3H0 131 aa8.32□□□□□ -1.08
SMARCE1-204ENST00000400122 HSPB8Q9UJY1 196 aa8.32□□□□□ -1.08
SMARCE1-204ENST00000400122 A0A0U1RRA0 63 aa8.31□□□□□ -1.08
SMARCE1-204ENST00000400122 NDUFC2O95298 119 aa8.31□□□□□ -1.08
SMARCE1-204ENST00000400122 SPINK1P00995 79 aa8.31□□□□□ -1.08
SMARCE1-204ENST00000400122 RPS29P62273 56 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-204ENST00000400122 C3orf22Q8N5N4 141 aa8.31□□□□□ -1.08
SMARCE1-204ENST00000400122 ETDCA0A1B0GVM5 59 aa8.3□□□□□ -1.08
SMARCE1-204ENST00000400122 TRGC2P03986 189 aa8.3□□□□□ -1.08
SMARCE1-204ENST00000400122 MUC17Q685J3 4493 aa8.3□□□□□ -1.08
SMARCE1-204ENST00000400122 TRBV10-3A0A0K0K1G6 114 aa8.29□□□□□ -1.08
SMARCE1-204ENST00000400122 C5orf52A6NGY3 159 aa8.29□□□□□ -1.08
SMARCE1-204ENST00000400122 J3QQQ9 107 aa8.29□□□□□ -1.08
SMARCE1-204ENST00000400122 SERF1AO75920 110 aa8.29□□□□□ -1.08
SMARCE1-204ENST00000400122 DPM2O94777 84 aa8.29□□□□□ -1.08
SMARCE1-204ENST00000400122 LINC00310P59036 64 aa8.29□□□□□ -1.08
SMARCE1-204ENST00000400122 HERVK_113P61574 105 aa8.29□□□□□ -1.08
SMARCE1-204ENST00000400122 C4orf48Q5BLP8 95 aa8.29□□□□□ -1.08
SMARCE1-204ENST00000400122 CDIP1Q9H305 208 aa8.29□□□□□ -1.08
SMARCE1-204ENST00000400122 B5MCH6 92 aa8.28□□□□□ -1.08
SMARCE1-204ENST00000400122 SMCR5Q8TEV8 140 aa8.28□□□□□ -1.08
SMARCE1-204ENST00000400122 RETNLBQ9BQ08 111 aa8.28□□□□□ -1.08
SMARCE1-204ENST00000400122 SPANXB1Q9NS25 103 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1-204ENST00000400122 FAT4Q6V0I7 4981 aa8.28□□□□□ -1.08
SMARCE1-204ENST00000400122 NCR3O14931 201 aa8.27□□□□□ -1.09
SMARCE1-204ENST00000400122 TSPEAR-AS2P59090 65 aa8.27□□□□□ -1.09
SMARCE1-204ENST00000400122 SSBP3-AS1Q7Z2R9 100 aa8.27□□□□□ -1.09
SMARCE1-204ENST00000400122 CBY1Q9Y3M2 126 aa8.27□□□□□ -1.09
SMARCE1-204ENST00000400122 IGLV6-57P01721 117 aa8.26□□□□□ -1.09
SMARCE1-204ENST00000400122 DDTP30046 118 aa8.26□□□□□ -1.09
SMARCE1-204ENST00000400122 Q6ZRX8 168 aa8.26□□□□□ -1.09
SMARCE1-204ENST00000400122 MIEN1Q9BRT3 115 aa8.26□□□□□ -1.09
SMARCE1-204ENST00000400122 PPDPFQ9H3Y8 114 aa8.26□□□□□ -1.09
SMARCE1-204ENST00000400122 IGKCP01834 107 aa8.25□□□□□ -1.09
SMARCE1-204ENST00000400122 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1-204ENST00000400122 JOSD1Q15040 202 aaPredicted RBP8.24□□□□□ -1.09
SMARCE1-204ENST00000400122 Q8NBF4 154 aa8.24□□□□□ -1.09
SMARCE1-204ENST00000400122 COLCA2A8K830 154 aa8.23□□□□□ -1.09
SMARCE1-204ENST00000400122 LGALS3P17931 250 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-204ENST00000400122 E9PLD3 99 aa8.22□□□□□ -1.09
SMARCE1-204ENST00000400122 H0Y8G0 127 aa8.22□□□□□ -1.09
SMARCE1-204ENST00000400122 KRTAP13-3Q3SY46 172 aa8.21□□□□□ -1.1
SMARCE1-204ENST00000400122 Q9BRP9 147 aa8.21□□□□□ -1.1
SMARCE1-204ENST00000400122 DAND5Q8N907 189 aa8.2□□□□□ -1.1
SMARCE1-204ENST00000400122 A0A0J9YXY3 114 aa8.19□□□□□ -1.1
SMARCE1-204ENST00000400122 TIMM17BO60830 172 aa8.19□□□□□ -1.1
SMARCE1-204ENST00000400122 FABP4P15090 132 aa8.19□□□□□ -1.1
SMARCE1-204ENST00000400122 S100A7L2Q5SY68 101 aa8.19□□□□□ -1.1
SMARCE1-204ENST00000400122 GAGE2AQ6NT46 116 aa8.19□□□□□ -1.1
SMARCE1-204ENST00000400122 TRAV23DV6A0A075B6W5 121 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms