RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 C9orf129Q5T035 196 aaKnown RBP7.77□□□□□ -1.16
CACNA1C-216ENST00000399638 SMCR5Q8TEV8 140 aa7.77□□□□□ -1.16
CACNA1C-216ENST00000399638 PCDH15Q96QU1 1955 aa7.77□□□□□ -1.17
CACNA1C-216ENST00000399638 CDC42SE2Q9NRR3 84 aa7.77□□□□□ -1.17
CACNA1C-216ENST00000399638 Q6ZRP5 223 aa7.77□□□□□ -1.17
CACNA1C-216ENST00000399638 Q8N6K4 173 aa7.77□□□□□ -1.17
CACNA1C-216ENST00000399638 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
CACNA1C-216ENST00000399638 C6orf48Q9UBA6 75 aa7.77□□□□□ -1.17
CACNA1C-216ENST00000399638 LINC00315P59091 139 aa7.77□□□□□ -1.17
CACNA1C-216ENST00000399638 C8orf87E5RJ46 101 aa7.77□□□□□ -1.17
CACNA1C-216ENST00000399638 PRR9Q5T870 116 aa7.76□□□□□ -1.17
CACNA1C-216ENST00000399638 C11orf21Q9P2W6 132 aa7.76□□□□□ -1.17
CACNA1C-216ENST00000399638 Q96NJ1 140 aa7.76□□□□□ -1.17
CACNA1C-216ENST00000399638 IGLV4-60A0A075B6I1 120 aa7.76□□□□□ -1.17
CACNA1C-216ENST00000399638 NBDYA0A0U1RRE5 68 aa7.75□□□□□ -1.17
CACNA1C-216ENST00000399638 SMIM29Q86T20 159 aa7.75□□□□□ -1.17
CACNA1C-216ENST00000399638 KLLNB2CW77 178 aa7.75□□□□□ -1.17
CACNA1C-216ENST00000399638 SMR3BP02814 79 aaPredicted RBP7.75□□□□□ -1.17
CACNA1C-216ENST00000399638 C22orf24Q9Y442 160 aa7.75□□□□□ -1.17
CACNA1C-216ENST00000399638 POLR2KP53803 58 aaKnown RBP7.75□□□□□ -1.17
CACNA1C-216ENST00000399638 CSNK1G2-AS1Q8NCQ2 148 aa7.75□□□□□ -1.17
CACNA1C-216ENST00000399638 FAM19A4Q96LR4 140 aa7.75□□□□□ -1.17
CACNA1C-216ENST00000399638 TRAV7A0A075B6U4 112 aa7.75□□□□□ -1.17
CACNA1C-216ENST00000399638 Q6ZRU5 148 aa7.75□□□□□ -1.17
CACNA1C-216ENST00000399638 PRO0461Q9UI25 63 aa7.74□□□□□ -1.17
CACNA1C-216ENST00000399638 MUC4Q99102 2169 aa7.74□□□□□ -1.17
CACNA1C-216ENST00000399638 IGLV6-57P01721 117 aa7.73□□□□□ -1.17
CACNA1C-216ENST00000399638 LINC00242Q5T6M2 205 aa7.73□□□□□ -1.17
CACNA1C-216ENST00000399638 F8WDY8 70 aa7.73□□□□□ -1.17
CACNA1C-216ENST00000399638 ZNF575Q86XF7 245 aa7.73□□□□□ -1.17
CACNA1C-216ENST00000399638 Q8N2B8 174 aa7.73□□□□□ -1.17
CACNA1C-216ENST00000399638 Q8N3U1 123 aa7.72□□□□□ -1.17
CACNA1C-216ENST00000399638 C4orf26Q17RF5 130 aa7.72□□□□□ -1.17
CACNA1C-216ENST00000399638 PHF5AQ7RTV0 110 aaKnown RBP7.72□□□□□ -1.17
CACNA1C-216ENST00000399638 NTM-AS1Q6ZSK4 140 aa7.72□□□□□ -1.17
CACNA1C-216ENST00000399638 C9orf92A6NGG3 77 aa7.71□□□□□ -1.17
CACNA1C-216ENST00000399638 IGIPA6NJ69 53 aa7.71□□□□□ -1.17
CACNA1C-216ENST00000399638 FLNBO75369 2602 aaKnown RBP7.71□□□□□ -1.18
CACNA1C-216ENST00000399638 M0R2T5 61 aa7.7□□□□□ -1.18
CACNA1C-216ENST00000399638 GAS8-AS1O95177 125 aa7.69□□□□□ -1.18
CACNA1C-216ENST00000399638 EPG5Q9HCE0 2579 aa7.69□□□□□ -1.18
CACNA1C-216ENST00000399638 Q8N814 137 aa7.69□□□□□ -1.18
CACNA1C-216ENST00000399638 LINC00313P59037 77 aa7.68□□□□□ -1.18
CACNA1C-216ENST00000399638 PTPRSQ13332 1948 aa7.67□□□□□ -1.18
CACNA1C-216ENST00000399638 CXCL6P80162 114 aa7.67□□□□□ -1.18
CACNA1C-216ENST00000399638 A0A1W2PPR1 153 aa7.67□□□□□ -1.18
CACNA1C-216ENST00000399638 SPATA3Q8NHX4 192 aa7.66□□□□□ -1.18
CACNA1C-216ENST00000399638 RPS28P62857 69 aaKnown RBP7.65□□□□□ -1.18
CACNA1C-216ENST00000399638 Q6ZSN1 163 aa7.65□□□□□ -1.18
CACNA1C-216ENST00000399638 HCFC1P51610 2035 aa7.65□□□□□ -1.19
CACNA1C-216ENST00000399638 KIF25-AS1Q9Y6Z4 181 aa7.65□□□□□ -1.19
CACNA1C-216ENST00000399638 ACANP16112 2415 aa7.64□□□□□ -1.19
CACNA1C-216ENST00000399638 EPM2AB3EWF7 344 aa7.64□□□□□ -1.19
CACNA1C-216ENST00000399638 ARHGAP32A7KAX9 2087 aa7.64□□□□□ -1.19
CACNA1C-216ENST00000399638 LINC01600Q96MT4 127 aa7.62□□□□□ -1.19
CACNA1C-216ENST00000399638 SMCPP49901 116 aaPredicted RBP7.62□□□□□ -1.19
CACNA1C-216ENST00000399638 C5orf42Q9H799 3197 aa7.61□□□□□ -1.19
CACNA1C-216ENST00000399638 ADAMTS20P59510 1910 aa7.61□□□□□ -1.19
CACNA1C-216ENST00000399638 LUZP6Q538Z0 58 aa7.61□□□□□ -1.19
CACNA1C-216ENST00000399638 Q8NBF4 154 aa7.61□□□□□ -1.19
CACNA1C-216ENST00000399638 SMIM1B2RUZ4 78 aa7.6□□□□□ -1.19
CACNA1C-216ENST00000399638 AMELXQ99217 191 aa7.59□□□□□ -1.19
CACNA1C-216ENST00000399638 LINC00167Q96N53 147 aa7.59□□□□□ -1.19
CACNA1C-216ENST00000399638 BCE1O60756 84 aa7.59□□□□□ -1.19
CACNA1C-216ENST00000399638 BRCA2P51587 3418 aa7.59□□□□□ -1.19
CACNA1C-216ENST00000399638 KIAA0087Q14695 138 aa7.59□□□□□ -1.19
CACNA1C-216ENST00000399638 LINC00336Q6ZUF6 198 aa7.59□□□□□ -1.19
CACNA1C-216ENST00000399638 LINC00588Q9Y4M8 146 aa7.59□□□□□ -1.19
CACNA1C-216ENST00000399638 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.2
CACNA1C-216ENST00000399638 RBM12B-AS1Q9P1G2 102 aa7.59□□□□□ -1.2
CACNA1C-216ENST00000399638 ZNF580Q9UK33 172 aa7.58□□□□□ -1.2
CACNA1C-216ENST00000399638 A0A1B0GUV1 79 aa7.57□□□□□ -1.2
CACNA1C-216ENST00000399638 ATRQ13535 2644 aa7.57□□□□□ -1.2
CACNA1C-216ENST00000399638 TSPEAR-AS2P59090 65 aa7.57□□□□□ -1.2
CACNA1C-216ENST00000399638 IGLV5-37A0A075B6J1 123 aa7.56□□□□□ -1.2
CACNA1C-216ENST00000399638 TM2D3Q9BRN9 247 aa7.56□□□□□ -1.2
CACNA1C-216ENST00000399638 KLK9Q2XQG4 91 aa7.56□□□□□ -1.2
CACNA1C-216ENST00000399638 MGAM2Q2M2H8 2515 aa7.56□□□□□ -1.2
CACNA1C-216ENST00000399638 AGRNO00468 2067 aa7.56□□□□□ -1.2
CACNA1C-216ENST00000399638 CEP350Q5VT06 3117 aa7.55□□□□□ -1.2
CACNA1C-216ENST00000399638 USP24Q9UPU5 2620 aa7.55□□□□□ -1.2
CACNA1C-216ENST00000399638 K7EIL1 84 aa7.53□□□□□ -1.2
CACNA1C-216ENST00000399638 DNAH10OSP0CZ25 163 aa7.53□□□□□ -1.2
CACNA1C-216ENST00000399638 MKI67P46013 3256 aaKnown RBP7.53□□□□□ -1.2
CACNA1C-216ENST00000399638 MAST4O15021 2626 aa7.52□□□□□ -1.21
CACNA1C-216ENST00000399638 C8orf17Q9NRJ1 99 aa7.51□□□□□ -1.21
CACNA1C-216ENST00000399638 IGLV5-48A0A075B6I7 105 aa7.51□□□□□ -1.21
CACNA1C-216ENST00000399638 IGLV5-45A0A087WSX0 123 aa7.51□□□□□ -1.21
CACNA1C-216ENST00000399638 DSCR10P59022 87 aa7.51□□□□□ -1.21
CACNA1C-216ENST00000399638 PRO0628Q9UI54 55 aa7.51□□□□□ -1.21
CACNA1C-216ENST00000399638 ADAMTSL4-AS1Q5T5F5 129 aa7.51□□□□□ -1.21
CACNA1C-216ENST00000399638 IGLV5-39A0A0G2JS06 123 aa7.5□□□□□ -1.21
CACNA1C-216ENST00000399638 K7EQZ3 153 aa7.5□□□□□ -1.21
CACNA1C-216ENST00000399638 Q6ZQT0 140 aa7.5□□□□□ -1.21
CACNA1C-216ENST00000399638 LINC00528Q8N1L1 170 aa7.49□□□□□ -1.21
CACNA1C-216ENST00000399638 LINC00846Q9NV44 126 aa7.49□□□□□ -1.21
CACNA1C-216ENST00000399638 MIR22HGQ0VDD5 57 aa7.49□□□□□ -1.21
CACNA1C-216ENST00000399638 TRAV22A0A0B4J277 110 aa7.49□□□□□ -1.21
CACNA1C-216ENST00000399638 TLX1NBP0CAT3 122 aa7.48□□□□□ -1.21
CACNA1C-216ENST00000399638 H3BNG1 76 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms