RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 E9PLD3 99 aa15.88■□□□□ 0.13
TMEM55B-202ENST00000398020 PLA2G1BP04054 148 aaKnown RBP15.87■□□□□ 0.13
TMEM55B-202ENST00000398020 LGALS3P17931 250 aaKnown RBP15.87■□□□□ 0.13
TMEM55B-202ENST00000398020 PHF5AQ7RTV0 110 aaKnown RBP15.87■□□□□ 0.13
TMEM55B-202ENST00000398020 C7orf33Q8WU49 177 aa15.87■□□□□ 0.13
TMEM55B-202ENST00000398020 MYMXA0A1B0GTQ4 84 aa15.86■□□□□ 0.13
TMEM55B-202ENST00000398020 RPL37AP61513 92 aaKnown RBP15.86■□□□□ 0.13
TMEM55B-202ENST00000398020 COX17Q14061 63 aa15.86■□□□□ 0.13
TMEM55B-202ENST00000398020 SERTAD4-AS1Q5TG53 156 aa15.86■□□□□ 0.13
TMEM55B-202ENST00000398020 UQCR10Q9UDW1 63 aa15.86■□□□□ 0.13
TMEM55B-202ENST00000398020 LINC00158P58513 81 aa15.86■□□□□ 0.13
TMEM55B-202ENST00000398020 HERV-K104P63124 156 aa15.85■□□□□ 0.13
TMEM55B-202ENST00000398020 MEIG1Q5JSS6 88 aa15.85■□□□□ 0.13
TMEM55B-202ENST00000398020 SMIM13P0DJ93 91 aa15.84■□□□□ 0.13
TMEM55B-202ENST00000398020 C14orf144Q96I85 54 aa15.84■□□□□ 0.13
TMEM55B-202ENST00000398020 KRTAP10-4P60372 401 aaPredicted RBP15.83■□□□□ 0.13
TMEM55B-202ENST00000398020 SND1-IT1Q9HBX3 110 aa15.83■□□□□ 0.13
TMEM55B-202ENST00000398020 M0QXV9 152 aa15.83■□□□□ 0.12
TMEM55B-202ENST00000398020 IGKV2D-26A0A0A0MRZ7 120 aa15.82■□□□□ 0.12
TMEM55B-202ENST00000398020 ANKRD39Q53RE8 183 aa15.82■□□□□ 0.12
TMEM55B-202ENST00000398020 NMUP48645 174 aa15.81■□□□□ 0.12
TMEM55B-202ENST00000398020 TTTY13Q9BZ97 58 aa15.78■□□□□ 0.12
TMEM55B-202ENST00000398020 C22orf24Q9Y442 160 aa15.77■□□□□ 0.12
TMEM55B-202ENST00000398020 COX8AP10176 69 aa15.76■□□□□ 0.11
TMEM55B-202ENST00000398020 MIR7-3HGQ8N6C7 128 aa15.76■□□□□ 0.11
TMEM55B-202ENST00000398020 SLC25A34Q6PIV7 304 aa15.76■□□□□ 0.11
TMEM55B-202ENST00000398020 KRTAP11-1Q8IUC1 163 aa15.76■□□□□ 0.11
TMEM55B-202ENST00000398020 DAND5Q8N907 189 aa15.75■□□□□ 0.11
TMEM55B-202ENST00000398020 INAFM2P0DMQ5 153 aa15.74■□□□□ 0.11
TMEM55B-202ENST00000398020 PRR3P79522 188 aaKnown RBP15.74■□□□□ 0.11
TMEM55B-202ENST00000398020 PLA2G2DQ9UNK4 145 aa15.74■□□□□ 0.11
TMEM55B-202ENST00000398020 A0A0J9YXY3 114 aa15.73■□□□□ 0.11
TMEM55B-202ENST00000398020 HNRNPA3P51991 378 aaKnown RBP15.73■□□□□ 0.11
TMEM55B-202ENST00000398020 UBE2BP63146 152 aa15.73■□□□□ 0.11
TMEM55B-202ENST00000398020 Q8NDZ9 215 aa15.73■□□□□ 0.11
TMEM55B-202ENST00000398020 ZNF815PA8K554 130 aa15.72■□□□□ 0.11
TMEM55B-202ENST00000398020 PSORS1C2Q9UIG4 136 aa15.72■□□□□ 0.11
TMEM55B-202ENST00000398020 CTAG1AP78358 180 aa15.71■□□□□ 0.11
TMEM55B-202ENST00000398020 TP73-AS1Q9UF72 201 aa15.71■□□□□ 0.11
TMEM55B-202ENST00000398020 MRPL55Q7Z7F7 128 aaKnown RBP15.7■□□□□ 0.1
TMEM55B-202ENST00000398020 NKAPP1Q8N9T2 125 aa15.7■□□□□ 0.1
TMEM55B-202ENST00000398020 GAGE10A6NGK3 116 aa15.7■□□□□ 0.1
TMEM55B-202ENST00000398020 BOD1L2Q8IYS8 172 aa15.7■□□□□ 0.1
TMEM55B-202ENST00000398020 VPREB1P12018 145 aa15.69■□□□□ 0.1
TMEM55B-202ENST00000398020 DLEU1O43261 78 aa15.68■□□□□ 0.1
TMEM55B-202ENST00000398020 LBHQ53QV2 105 aaPredicted RBP15.68■□□□□ 0.1
TMEM55B-202ENST00000398020 IGLV5-37A0A075B6J1 123 aa15.67■□□□□ 0.1
TMEM55B-202ENST00000398020 ADAMTSL4-AS1Q5T5F5 129 aa15.67■□□□□ 0.1
TMEM55B-202ENST00000398020 LINC00167Q96N53 147 aa15.67■□□□□ 0.1
TMEM55B-202ENST00000398020 FLG2Q5D862 2391 aaPredicted RBP15.67■□□□□ 0.1
TMEM55B-202ENST00000398020 PCP2Q8IVA1 136 aa15.67■□□□□ 0.1
TMEM55B-202ENST00000398020 SNHG12Q9BXW3 62 aa15.67■□□□□ 0.1
TMEM55B-202ENST00000398020 RPL37AP8A6NKH3 93 aa15.66■□□□□ 0.1
TMEM55B-202ENST00000398020 M0R143 59 aa15.66■□□□□ 0.1
TMEM55B-202ENST00000398020 RPL24P83731 157 aaKnown RBP15.66■□□□□ 0.1
TMEM55B-202ENST00000398020 C1orf137Q5JT78 98 aa15.66■□□□□ 0.1
TMEM55B-202ENST00000398020 MYCBP2O75592 4640 aa15.64■□□□□ 0.09
TMEM55B-202ENST00000398020 NPC2P61916 151 aa15.63■□□□□ 0.09
TMEM55B-202ENST00000398020 C2orf91Q6ZV80 131 aa15.63■□□□□ 0.09
TMEM55B-202ENST00000398020 LITAFQ99732 161 aa15.62■□□□□ 0.09
TMEM55B-202ENST00000398020 IGKV2-28A0A075B6P5 120 aa15.6■□□□□ 0.09
TMEM55B-202ENST00000398020 IGKV2D-28P01615 120 aa15.6■□□□□ 0.09
TMEM55B-202ENST00000398020 SCGB1D4Q6XE38 83 aa15.6■□□□□ 0.09
TMEM55B-202ENST00000398020 PKHD1L1Q86WI1 4243 aa15.6■□□□□ 0.09
TMEM55B-202ENST00000398020 EIF4EBP3O60516 100 aaPredicted RBP15.6■□□□□ 0.09
TMEM55B-202ENST00000398020 NCR3O14931 201 aa15.58■□□□□ 0.08
TMEM55B-202ENST00000398020 TIMM17BO60830 172 aa15.58■□□□□ 0.08
TMEM55B-202ENST00000398020 SOSTDC1Q6X4U4 206 aa15.58■□□□□ 0.08
TMEM55B-202ENST00000398020 LOC107984156A0A0G2JMH3 177 aa15.57■□□□□ 0.08
TMEM55B-202ENST00000398020 ARL17AQ8IVW1 177 aa15.57■□□□□ 0.08
TMEM55B-202ENST00000398020 IGLV7-43P04211 117 aa15.54■□□□□ 0.08
TMEM55B-202ENST00000398020 IGLV1-50A0A075B6I6 118 aa15.54■□□□□ 0.08
TMEM55B-202ENST00000398020 M0R378 163 aa15.54■□□□□ 0.08
TMEM55B-202ENST00000398020 HINT1P49773 126 aaPredicted RBP15.54■□□□□ 0.08
TMEM55B-202ENST00000398020 HIGD1BQ9P298 99 aa15.54■□□□□ 0.08
TMEM55B-202ENST00000398020 BATFQ16520 125 aa15.53■□□□□ 0.08
TMEM55B-202ENST00000398020 LINC00308Q8TCZ7 52 aa15.53■□□□□ 0.08
TMEM55B-202ENST00000398020 SRSF9Q13242 221 aaKnown RBP eCLIP15.52■□□□□ 0.08
TMEM55B-202ENST00000398020 TMEM238C9JI98 176 aa15.51■□□□□ 0.07
TMEM55B-202ENST00000398020 SPINK6Q6UWN8 80 aa15.5■□□□□ 0.07
TMEM55B-202ENST00000398020 BVES-AS1Q5T3Y7 98 aa15.49■□□□□ 0.07
TMEM55B-202ENST00000398020 LRP1Q07954 4544 aaKnown RBP15.49■□□□□ 0.07
TMEM55B-202ENST00000398020 HSD52Q0P140 79 aa15.48■□□□□ 0.07
TMEM55B-202ENST00000398020 SPANXDQ9BXN6 97 aa15.48■□□□□ 0.07
TMEM55B-202ENST00000398020 SPANXCQ9NY87 97 aa15.48■□□□□ 0.07
TMEM55B-202ENST00000398020 BCE1O60756 84 aa15.47■□□□□ 0.07
TMEM55B-202ENST00000398020 NDUFC2O95298 119 aa15.47■□□□□ 0.07
TMEM55B-202ENST00000398020 SPANXB1Q9NS25 103 aaPredicted RBP15.47■□□□□ 0.07
TMEM55B-202ENST00000398020 COL5A1-AS1Q5SY13 56 aa15.46■□□□□ 0.07
TMEM55B-202ENST00000398020 TMEM126AQ9H061 195 aa15.46■□□□□ 0.07
TMEM55B-202ENST00000398020 TRBV10-3A0A0K0K1G6 114 aa15.44■□□□□ 0.06
TMEM55B-202ENST00000398020 REG3GQ6UW15 175 aa15.44■□□□□ 0.06
TMEM55B-202ENST00000398020 TRBV10-2A0A0K0K1G8 114 aa15.43■□□□□ 0.06
TMEM55B-202ENST00000398020 FAT3Q8TDW7 4589 aa15.42■□□□□ 0.06
TMEM55B-202ENST00000398020 ZNF861PO60384 105 aa15.41■□□□□ 0.06
TMEM55B-202ENST00000398020 MUSTN1Q8IVN3 82 aa15.4■□□□□ 0.06
TMEM55B-202ENST00000398020 UBE2AP49459 152 aa15.39■□□□□ 0.05
TMEM55B-202ENST00000398020 TAL2Q16559 108 aa15.39■□□□□ 0.05
TMEM55B-202ENST00000398020 S100A7L2Q5SY68 101 aa15.39■□□□□ 0.05
TMEM55B-202ENST00000398020 Q6ZVH6 145 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms