RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 F8WDY8 70 aa12.55□□□□□ -0.4
CHRFAM7A-202ENST00000397827 CD164L2Q6UWJ8 174 aa12.55□□□□□ -0.4
CHRFAM7A-202ENST00000397827 PKIGQ9Y2B9 76 aa12.55□□□□□ -0.4
CHRFAM7A-202ENST00000397827 A0A087WYN8 130 aa12.55□□□□□ -0.4
CHRFAM7A-202ENST00000397827 SPART-AS1P0CW21 52 aa12.54□□□□□ -0.4
CHRFAM7A-202ENST00000397827 KIAA0087Q14695 138 aa12.53□□□□□ -0.4
CHRFAM7A-202ENST00000397827 Q6JHZ5 121 aa12.53□□□□□ -0.4
CHRFAM7A-202ENST00000397827 PRR3P79522 188 aaKnown RBP12.52□□□□□ -0.4
CHRFAM7A-202ENST00000397827 WFDC9Q8NEX5 89 aa12.52□□□□□ -0.4
CHRFAM7A-202ENST00000397827 LINC00846Q9NV44 126 aa12.52□□□□□ -0.4
CHRFAM7A-202ENST00000397827 C9orf116Q5BN46 136 aaPredicted RBP12.52□□□□□ -0.41
CHRFAM7A-202ENST00000397827 C14orf132Q9NPU4 83 aa12.52□□□□□ -0.41
CHRFAM7A-202ENST00000397827 C9orf129Q5T035 196 aaKnown RBP12.5□□□□□ -0.41
CHRFAM7A-202ENST00000397827 F8P00451 2351 aa12.5□□□□□ -0.41
CHRFAM7A-202ENST00000397827 OXLD1Q5BKU9 147 aa12.48□□□□□ -0.41
CHRFAM7A-202ENST00000397827 NDUFC2O95298 119 aa12.47□□□□□ -0.41
CHRFAM7A-202ENST00000397827 LECT2O14960 151 aa12.47□□□□□ -0.41
CHRFAM7A-202ENST00000397827 LELP1Q5T871 98 aa12.47□□□□□ -0.41
CHRFAM7A-202ENST00000397827 H0YGX0 51 aa12.47□□□□□ -0.41
CHRFAM7A-202ENST00000397827 KLK12Q9UKR0 248 aa12.47□□□□□ -0.41
CHRFAM7A-202ENST00000397827 FAM236DA0A1B0GTK5 79 aa12.46□□□□□ -0.41
CHRFAM7A-202ENST00000397827 FAM236CP0DP71 79 aa12.46□□□□□ -0.41
CHRFAM7A-202ENST00000397827 C6orf223Q8N319 242 aa12.46□□□□□ -0.41
CHRFAM7A-202ENST00000397827 PKD1L1Q8TDX9 2849 aa12.46□□□□□ -0.42
CHRFAM7A-202ENST00000397827 GHRHP01286 108 aa12.46□□□□□ -0.42
CHRFAM7A-202ENST00000397827 ANK2Q01484 3957 aa12.45□□□□□ -0.42
CHRFAM7A-202ENST00000397827 C20orf197Q8N268 126 aa12.45□□□□□ -0.42
CHRFAM7A-202ENST00000397827 RETNQ9HD89 108 aa12.45□□□□□ -0.42
CHRFAM7A-202ENST00000397827 NDUFC2-KCTD14E9PQ53 114 aa12.45□□□□□ -0.42
CHRFAM7A-202ENST00000397827 SLPIP03973 132 aa12.44□□□□□ -0.42
CHRFAM7A-202ENST00000397827 C10orf25Q5T742 122 aa12.44□□□□□ -0.42
CHRFAM7A-202ENST00000397827 FLNBO75369 2602 aaKnown RBP12.43□□□□□ -0.42
CHRFAM7A-202ENST00000397827 TRAV23DV6A0A075B6W5 121 aa12.43□□□□□ -0.42
CHRFAM7A-202ENST00000397827 NANOS2P60321 138 aaKnown RBP12.42□□□□□ -0.42
CHRFAM7A-202ENST00000397827 COX17Q14061 63 aa12.42□□□□□ -0.42
CHRFAM7A-202ENST00000397827 UNQ6190/PRO20217Q6UXQ8 127 aa12.42□□□□□ -0.42
CHRFAM7A-202ENST00000397827 Q8NDZ9 215 aa12.42□□□□□ -0.42
CHRFAM7A-202ENST00000397827 STAB1Q9NY15 2570 aa12.42□□□□□ -0.42
CHRFAM7A-202ENST00000397827 SPAG11BQ08648 103 aa12.41□□□□□ -0.42
CHRFAM7A-202ENST00000397827 LYPD5Q6UWN5 251 aa12.41□□□□□ -0.42
CHRFAM7A-202ENST00000397827 KRTAP10-11P60412 298 aa12.41□□□□□ -0.42
CHRFAM7A-202ENST00000397827 ENHOQ6UWT2 76 aa12.41□□□□□ -0.42
CHRFAM7A-202ENST00000397827 SERP1Q9Y6X1 66 aa12.41□□□□□ -0.42
CHRFAM7A-202ENST00000397827 NCR3O14931 201 aa12.4□□□□□ -0.43
CHRFAM7A-202ENST00000397827 PRR34Q9NV39 138 aa12.4□□□□□ -0.43
CHRFAM7A-202ENST00000397827 SEC61GP60059 68 aa12.39□□□□□ -0.43
CHRFAM7A-202ENST00000397827 CYSRT1A8MQ03 144 aa12.38□□□□□ -0.43
CHRFAM7A-202ENST00000397827 TENM3Q9P273 2699 aa12.38□□□□□ -0.43
CHRFAM7A-202ENST00000397827 EPM2AB3EWF7 344 aa12.38□□□□□ -0.43
CHRFAM7A-202ENST00000397827 FBN1P35555 2871 aaKnown RBP12.37□□□□□ -0.43
CHRFAM7A-202ENST00000397827 WFDC10BQ8IUB3 73 aa12.35□□□□□ -0.43
CHRFAM7A-202ENST00000397827 A0A0U1RQV1 116 aa12.35□□□□□ -0.43
CHRFAM7A-202ENST00000397827 Q6ZTC4 211 aa12.35□□□□□ -0.43
CHRFAM7A-202ENST00000397827 FAM19A1Q7Z5A9 133 aa12.35□□□□□ -0.43
CHRFAM7A-202ENST00000397827 KPRPQ5T749 579 aaPredicted RBP12.35□□□□□ -0.43
CHRFAM7A-202ENST00000397827 FP248Q71RG6 208 aaPredicted RBP12.34□□□□□ -0.43
CHRFAM7A-202ENST00000397827 V9GYY9 64 aa12.34□□□□□ -0.43
CHRFAM7A-202ENST00000397827 ORMDL1Q9P0S3 153 aa12.34□□□□□ -0.43
CHRFAM7A-202ENST00000397827 H7BZZ5 65 aa12.33□□□□□ -0.44
CHRFAM7A-202ENST00000397827 OBSCN-AS1Q96MR7 158 aa12.33□□□□□ -0.44
CHRFAM7A-202ENST00000397827 C6orf99Q4VX62 202 aa12.32□□□□□ -0.44
CHRFAM7A-202ENST00000397827 S100A7L2Q5SY68 101 aa12.32□□□□□ -0.44
CHRFAM7A-202ENST00000397827 MAST4O15021 2626 aa12.32□□□□□ -0.44
CHRFAM7A-202ENST00000397827 A0A0J9YWU9 116 aa12.31□□□□□ -0.44
CHRFAM7A-202ENST00000397827 Q8N814 137 aa12.31□□□□□ -0.44
CHRFAM7A-202ENST00000397827 BRK1Q8WUW1 75 aa12.31□□□□□ -0.44
CHRFAM7A-202ENST00000397827 SMIM26A0A096LP01 95 aa12.31□□□□□ -0.44
CHRFAM7A-202ENST00000397827 KRTAP24-1Q3LI83 254 aa12.31□□□□□ -0.44
CHRFAM7A-202ENST00000397827 CMYA5Q8N3K9 4069 aa12.3□□□□□ -0.44
CHRFAM7A-202ENST00000397827 C1orf195Q5TG92 126 aa12.3□□□□□ -0.44
CHRFAM7A-202ENST00000397827 NOTCH1P46531 2555 aa12.29□□□□□ -0.44
CHRFAM7A-202ENST00000397827 C6orf48Q9UBA6 75 aa12.29□□□□□ -0.44
CHRFAM7A-202ENST00000397827 XAGE1AQ9HD64 81 aa12.29□□□□□ -0.44
CHRFAM7A-202ENST00000397827 HIGD2BQ4VC39 106 aa12.28□□□□□ -0.44
CHRFAM7A-202ENST00000397827 LINC00474Q9P2X8 69 aa12.28□□□□□ -0.44
CHRFAM7A-202ENST00000397827 LINC00167Q96N53 147 aa12.27□□□□□ -0.44
CHRFAM7A-202ENST00000397827 CCKP06307 115 aa12.27□□□□□ -0.45
CHRFAM7A-202ENST00000397827 SNURFQ9Y675 71 aa12.26□□□□□ -0.45
CHRFAM7A-202ENST00000397827 ESRGQ1W209 222 aa12.25□□□□□ -0.45
CHRFAM7A-202ENST00000397827 H3BNG1 76 aa12.24□□□□□ -0.45
CHRFAM7A-202ENST00000397827 EGFEM1PQ0D2K5 195 aa12.24□□□□□ -0.45
CHRFAM7A-202ENST00000397827 ATP5EP2Q5VTU8 51 aa12.24□□□□□ -0.45
CHRFAM7A-202ENST00000397827 GVQW2A0A096LPI5 108 aaPredicted RBP12.23□□□□□ -0.45
CHRFAM7A-202ENST00000397827 ZNF561-AS1K7EIQ3 104 aa12.23□□□□□ -0.45
CHRFAM7A-202ENST00000397827 RMI2Q96E14 147 aa12.23□□□□□ -0.45
CHRFAM7A-202ENST00000397827 RBM3P98179 157 aaKnown RBP12.22□□□□□ -0.45
CHRFAM7A-202ENST00000397827 KRTAP26-1Q6PEX3 210 aa12.22□□□□□ -0.45
CHRFAM7A-202ENST00000397827 MUC7Q8TAX7 377 aa12.22□□□□□ -0.45
CHRFAM7A-202ENST00000397827 TMEM256-PLSCR3K7ERE1 68 aa12.22□□□□□ -0.45
CHRFAM7A-202ENST00000397827 IGLV6-57P01721 117 aa12.22□□□□□ -0.45
CHRFAM7A-202ENST00000397827 LINC00575Q6W349 94 aa12.22□□□□□ -0.45
CHRFAM7A-202ENST00000397827 CAMK2N2Q96S95 79 aa12.22□□□□□ -0.45
CHRFAM7A-202ENST00000397827 F8WEM9 126 aa12.21□□□□□ -0.46
CHRFAM7A-202ENST00000397827 TRAV7A0A075B6U4 112 aa12.2□□□□□ -0.46
CHRFAM7A-202ENST00000397827 TRBV10-3A0A0K0K1G6 114 aa12.2□□□□□ -0.46
CHRFAM7A-202ENST00000397827 DEFB131BA0A096LNP1 70 aa12.2□□□□□ -0.46
CHRFAM7A-202ENST00000397827 TRBV7-6A0A0J9YX20 115 aa12.19□□□□□ -0.46
CHRFAM7A-202ENST00000397827 KLKP1Q107X0 134 aa12.18□□□□□ -0.46
CHRFAM7A-202ENST00000397827 Q6ZRU5 148 aa12.18□□□□□ -0.46
CHRFAM7A-202ENST00000397827 C11orf45Q8TAV5 145 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms