RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 ARL17AQ8IVW1 177 aa12.31□□□□□ -0.44
MAP1LC3A-203ENST00000397709 C12orf57Q99622 126 aa12.31□□□□□ -0.44
MAP1LC3A-203ENST00000397709 PLAC8Q9NZF1 115 aa12.31□□□□□ -0.44
MAP1LC3A-203ENST00000397709 BIRC6Q9NR09 4857 aa12.31□□□□□ -0.44
MAP1LC3A-203ENST00000397709 CIRBP-AS1Q8TBR5 109 aa12.3□□□□□ -0.44
MAP1LC3A-203ENST00000397709 DPH3Q96FX2 82 aa12.3□□□□□ -0.44
MAP1LC3A-203ENST00000397709 PLA2G2DQ9UNK4 145 aa12.3□□□□□ -0.44
MAP1LC3A-203ENST00000397709 SERTAD4-AS1Q5TG53 156 aa12.29□□□□□ -0.44
MAP1LC3A-203ENST00000397709 SOSTDC1Q6X4U4 206 aa12.29□□□□□ -0.44
MAP1LC3A-203ENST00000397709 C2orf91Q6ZV80 131 aa12.29□□□□□ -0.44
MAP1LC3A-203ENST00000397709 KRTAP7-1Q8IUC3 87 aa12.29□□□□□ -0.44
MAP1LC3A-203ENST00000397709 SPANXB1Q9NS25 103 aaPredicted RBP12.29□□□□□ -0.44
MAP1LC3A-203ENST00000397709 XGP55808 180 aa12.28□□□□□ -0.44
MAP1LC3A-203ENST00000397709 HAMPP81172 84 aa12.28□□□□□ -0.44
MAP1LC3A-203ENST00000397709 Q6ZVH6 145 aa12.28□□□□□ -0.44
MAP1LC3A-203ENST00000397709 LINC00518Q8N0U6 118 aa12.28□□□□□ -0.44
MAP1LC3A-203ENST00000397709 LINC00308Q8TCZ7 52 aa12.28□□□□□ -0.44
MAP1LC3A-203ENST00000397709 HIGD1BQ9P298 99 aa12.28□□□□□ -0.44
MAP1LC3A-203ENST00000397709 RYR1P21817 5038 aa12.28□□□□□ -0.44
MAP1LC3A-203ENST00000397709 EIF4EBP3O60516 100 aaPredicted RBP12.27□□□□□ -0.45
MAP1LC3A-203ENST00000397709 NPC2P61916 151 aa12.27□□□□□ -0.45
MAP1LC3A-203ENST00000397709 FAM19A5Q7Z5A7 132 aaPredicted RBP12.27□□□□□ -0.45
MAP1LC3A-203ENST00000397709 Q8NDZ9 215 aa12.27□□□□□ -0.45
MAP1LC3A-203ENST00000397709 UQCR10Q9UDW1 63 aa12.27□□□□□ -0.45
MAP1LC3A-203ENST00000397709 CDK2AP2O75956 126 aa12.26□□□□□ -0.45
MAP1LC3A-203ENST00000397709 MIEN1Q9BRT3 115 aa12.26□□□□□ -0.45
MAP1LC3A-203ENST00000397709 IGLV5-37A0A075B6J1 123 aa12.25□□□□□ -0.45
MAP1LC3A-203ENST00000397709 VPREB1P12018 145 aa12.25□□□□□ -0.45
MAP1LC3A-203ENST00000397709 IFITM1P13164 125 aa12.25□□□□□ -0.45
MAP1LC3A-203ENST00000397709 PRO1933Q9H354 126 aa12.25□□□□□ -0.45
MAP1LC3A-203ENST00000397709 PPDPFQ9H3Y8 114 aa12.25□□□□□ -0.45
MAP1LC3A-203ENST00000397709 RPL24P83731 157 aaKnown RBP12.24□□□□□ -0.45
MAP1LC3A-203ENST00000397709 SRSF9Q13242 221 aaKnown RBP eCLIP12.23□□□□□ -0.45
MAP1LC3A-203ENST00000397709 COPS9Q8WXC6 57 aa12.23□□□□□ -0.45
MAP1LC3A-203ENST00000397709 HSPG2P98160 4391 aa12.23□□□□□ -0.45
MAP1LC3A-203ENST00000397709 M0QXV9 152 aa12.22□□□□□ -0.45
MAP1LC3A-203ENST00000397709 MUSTN1Q8IVN3 82 aa12.22□□□□□ -0.45
MAP1LC3A-203ENST00000397709 C22orf24Q9Y442 160 aa12.22□□□□□ -0.45
MAP1LC3A-203ENST00000397709 NDUFC2O95298 119 aa12.21□□□□□ -0.45
MAP1LC3A-203ENST00000397709 KIAA1109Q2LD37 5005 aa12.2□□□□□ -0.46
MAP1LC3A-203ENST00000397709 PHF5AQ7RTV0 110 aaKnown RBP12.2□□□□□ -0.46
MAP1LC3A-203ENST00000397709 NKAPP1Q8N9T2 125 aa12.2□□□□□ -0.46
MAP1LC3A-203ENST00000397709 HIST1H4GQ99525 98 aa12.2□□□□□ -0.46
MAP1LC3A-203ENST00000397709 PRR3P79522 188 aaKnown RBP12.18□□□□□ -0.46
MAP1LC3A-203ENST00000397709 MRPL55Q7Z7F7 128 aaKnown RBP12.18□□□□□ -0.46
MAP1LC3A-203ENST00000397709 HNRNPA3P51991 378 aaKnown RBP12.17□□□□□ -0.46
MAP1LC3A-203ENST00000397709 TAL2Q16559 108 aa12.17□□□□□ -0.46
MAP1LC3A-203ENST00000397709 C7orf33Q8WU49 177 aa12.17□□□□□ -0.46
MAP1LC3A-203ENST00000397709 TSTD3H0UI37 97 aa12.16□□□□□ -0.46
MAP1LC3A-203ENST00000397709 NCR3O14931 201 aa12.16□□□□□ -0.46
MAP1LC3A-203ENST00000397709 LBHQ53QV2 105 aaPredicted RBP12.16□□□□□ -0.46
MAP1LC3A-203ENST00000397709 TRBV10-2A0A0K0K1G8 114 aa12.15□□□□□ -0.46
MAP1LC3A-203ENST00000397709 M0R378 163 aa12.15□□□□□ -0.46
MAP1LC3A-203ENST00000397709 LINC00167Q96N53 147 aa12.15□□□□□ -0.46
MAP1LC3A-203ENST00000397709 IGKV2-28A0A075B6P5 120 aa12.14□□□□□ -0.47
MAP1LC3A-203ENST00000397709 IGKV2D-28P01615 120 aa12.14□□□□□ -0.47
MAP1LC3A-203ENST00000397709 HSD52Q0P140 79 aa12.14□□□□□ -0.47
MAP1LC3A-203ENST00000397709 GAGE10A6NGK3 116 aa12.13□□□□□ -0.47
MAP1LC3A-203ENST00000397709 A4D1N5 150 aa12.12□□□□□ -0.47
MAP1LC3A-203ENST00000397709 CEND1Q8N111 149 aa12.12□□□□□ -0.47
MAP1LC3A-203ENST00000397709 FAT1Q14517 4588 aa12.12□□□□□ -0.47
MAP1LC3A-203ENST00000397709 SMR3BP02814 79 aaPredicted RBP12.11□□□□□ -0.47
MAP1LC3A-203ENST00000397709 UBE2BP63146 152 aa12.11□□□□□ -0.47
MAP1LC3A-203ENST00000397709 KRTAP11-1Q8IUC1 163 aa12.11□□□□□ -0.47
MAP1LC3A-203ENST00000397709 VPS13BQ7Z7G8 4022 aa12.1□□□□□ -0.47
MAP1LC3A-203ENST00000397709 LINC00528Q8N1L1 170 aa12.1□□□□□ -0.47
MAP1LC3A-203ENST00000397709 IGLV1-50A0A075B6I6 118 aa12.09□□□□□ -0.47
MAP1LC3A-203ENST00000397709 RPL37AP8A6NKH3 93 aa12.09□□□□□ -0.47
MAP1LC3A-203ENST00000397709 LINC00337Q8N6G1 96 aa12.09□□□□□ -0.47
MAP1LC3A-203ENST00000397709 TRBV10-3A0A0K0K1G6 114 aa12.08□□□□□ -0.48
MAP1LC3A-203ENST00000397709 IGLV6-57P01721 117 aa12.07□□□□□ -0.48
MAP1LC3A-203ENST00000397709 DDTP30046 118 aa12.07□□□□□ -0.48
MAP1LC3A-203ENST00000397709 FXYD2P54710 66 aa12.07□□□□□ -0.48
MAP1LC3A-203ENST00000397709 CTAG1AP78358 180 aa12.06□□□□□ -0.48
MAP1LC3A-203ENST00000397709 S100A7L2Q5SY68 101 aa12.06□□□□□ -0.48
MAP1LC3A-203ENST00000397709 PSORS1C2Q9UIG4 136 aa12.05□□□□□ -0.48
MAP1LC3A-203ENST00000397709 TMEM238LA0A1B0GVL6 79 aa12.04□□□□□ -0.48
MAP1LC3A-203ENST00000397709 A6NJY4 79 aa12.04□□□□□ -0.48
MAP1LC3A-203ENST00000397709 HERC2O95714 4834 aa12.03□□□□□ -0.48
MAP1LC3A-203ENST00000397709 TRAV13-2A0A0B4J235 113 aa12.03□□□□□ -0.48
MAP1LC3A-203ENST00000397709 PRYO14603 147 aa12.03□□□□□ -0.48
MAP1LC3A-203ENST00000397709 OR13C6PQ8NH95 151 aa12.03□□□□□ -0.48
MAP1LC3A-203ENST00000397709 KRTAP17-1Q9BYP8 105 aa12.03□□□□□ -0.48
MAP1LC3A-203ENST00000397709 TMEM126AQ9H061 195 aa12.03□□□□□ -0.48
MAP1LC3A-203ENST00000397709 KCNQ1DNQ9H478 68 aa12.03□□□□□ -0.48
MAP1LC3A-203ENST00000397709 CFC1BP0CG36 223 aa12.02□□□□□ -0.49
MAP1LC3A-203ENST00000397709 CFC1P0CG37 223 aa12.02□□□□□ -0.49
MAP1LC3A-203ENST00000397709 RPL37AP61513 92 aaKnown RBP12.02□□□□□ -0.49
MAP1LC3A-203ENST00000397709 A0A0B4J2C4 111 aa12.01□□□□□ -0.49
MAP1LC3A-203ENST00000397709 A6NDN8 102 aa12.01□□□□□ -0.49
MAP1LC3A-203ENST00000397709 BVES-AS1Q5T3Y7 98 aa12.01□□□□□ -0.49
MAP1LC3A-203ENST00000397709 REG3GQ6UW15 175 aa12□□□□□ -0.49
MAP1LC3A-203ENST00000397709 Q8N1X5 172 aa12□□□□□ -0.49
MAP1LC3A-203ENST00000397709 TRAV23DV6A0A075B6W5 121 aa11.99□□□□□ -0.49
MAP1LC3A-203ENST00000397709 FAM229AH3BQW9 127 aa11.99□□□□□ -0.49
MAP1LC3A-203ENST00000397709 KRTAP10-4P60372 401 aaPredicted RBP11.99□□□□□ -0.49
MAP1LC3A-203ENST00000397709 C1orf137Q5JT78 98 aa11.99□□□□□ -0.49
MAP1LC3A-203ENST00000397709 Q5VSD8 79 aa11.99□□□□□ -0.49
MAP1LC3A-203ENST00000397709 M0R143 59 aa11.98□□□□□ -0.49
MAP1LC3A-203ENST00000397709 SPRR1AP35321 89 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms