RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 FAT2Q9NYQ8 4349 aa15.11■□□□□ 0.01
TSPAN4-202ENST00000397396 A0A096LNI7 61 aa15.11■□□□□ 0.01
TSPAN4-202ENST00000397396 A0A1B0GVY2 172 aa15.11■□□□□ 0.01
TSPAN4-202ENST00000397396 IGKV2-24A0A0C4DH68 120 aa15.09■□□□□ 0.01
TSPAN4-202ENST00000397396 NDUFC2O95298 119 aa15.09■□□□□ 0.01
TSPAN4-202ENST00000397396 LINC01620Q4KN68 170 aa15.09■□□□□ 0.01
TSPAN4-202ENST00000397396 SOSTDC1Q6X4U4 206 aa15.09■□□□□ 0.01
TSPAN4-202ENST00000397396 PCP4L1A6NKN8 68 aa15.08■□□□□ 0
TSPAN4-202ENST00000397396 C9orf129Q5T035 196 aaKnown RBP15.08■□□□□ 0
TSPAN4-202ENST00000397396 PLA2G2DQ9UNK4 145 aa15.08■□□□□ 0
TSPAN4-202ENST00000397396 FUSP35637 526 aaKnown RBP eCLIP15.07■□□□□ 0
TSPAN4-202ENST00000397396 A4D1N5 150 aa15.04■□□□□ -0
TSPAN4-202ENST00000397396 SPACA4Q8TDM5 124 aa15.04■□□□□ -0
TSPAN4-202ENST00000397396 EIF4EBP3O60516 100 aaPredicted RBP15.03■□□□□ -0
TSPAN4-202ENST00000397396 HINT1P49773 126 aaPredicted RBP15.02■□□□□ -0
TSPAN4-202ENST00000397396 BVES-AS1Q5T3Y7 98 aa15.02■□□□□ -0
TSPAN4-202ENST00000397396 FXYD2P54710 66 aa15.01□□□□□ -0.01
TSPAN4-202ENST00000397396 NKAPP1Q8N9T2 125 aa15.01□□□□□ -0.01
TSPAN4-202ENST00000397396 IGLV5-37A0A075B6J1 123 aa15□□□□□ -0.01
TSPAN4-202ENST00000397396 TRBV10-2A0A0K0K1G8 114 aa15□□□□□ -0.01
TSPAN4-202ENST00000397396 CHTF8P0CG12 524 aa15□□□□□ -0.01
TSPAN4-202ENST00000397396 VPREB1P12018 145 aa15□□□□□ -0.01
TSPAN4-202ENST00000397396 DPH3Q96FX2 82 aa15□□□□□ -0.01
TSPAN4-202ENST00000397396 DNAH11Q96DT5 4516 aa15□□□□□ -0.01
TSPAN4-202ENST00000397396 A0A0B4J2C4 111 aa14.97□□□□□ -0.01
TSPAN4-202ENST00000397396 A6NDN8 102 aa14.97□□□□□ -0.01
TSPAN4-202ENST00000397396 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.97□□□□□ -0.01
TSPAN4-202ENST00000397396 TRAV13-2A0A0B4J235 113 aa14.96□□□□□ -0.01
TSPAN4-202ENST00000397396 SERTAD4-AS1Q5TG53 156 aa14.96□□□□□ -0.01
TSPAN4-202ENST00000397396 FAM19A5Q7Z5A7 132 aaPredicted RBP14.96□□□□□ -0.01
TSPAN4-202ENST00000397396 M0R378 163 aa14.95□□□□□ -0.02
TSPAN4-202ENST00000397396 KRTAP10-1P60331 282 aa14.95□□□□□ -0.02
TSPAN4-202ENST00000397396 Q6ZSA8 131 aa14.95□□□□□ -0.02
TSPAN4-202ENST00000397396 RAB37Q96AX2 223 aa14.95□□□□□ -0.02
TSPAN4-202ENST00000397396 NHP2Q9NX24 153 aaKnown RBP14.95□□□□□ -0.02
TSPAN4-202ENST00000397396 HECTD4Q9Y4D8 3996 aa14.94□□□□□ -0.02
TSPAN4-202ENST00000397396 FAM168BA1KXE4 195 aa14.94□□□□□ -0.02
TSPAN4-202ENST00000397396 PANO1I0J062 215 aa14.93□□□□□ -0.02
TSPAN4-202ENST00000397396 M0QXV9 152 aa14.93□□□□□ -0.02
TSPAN4-202ENST00000397396 NCR3O14931 201 aa14.93□□□□□ -0.02
TSPAN4-202ENST00000397396 LBHQ53QV2 105 aaPredicted RBP14.93□□□□□ -0.02
TSPAN4-202ENST00000397396 Q8NDZ9 215 aa14.93□□□□□ -0.02
TSPAN4-202ENST00000397396 DNAH5Q8TE73 4624 aa14.93□□□□□ -0.02
TSPAN4-202ENST00000397396 PKD1P98161 4303 aa14.93□□□□□ -0.02
TSPAN4-202ENST00000397396 IGKV2-28A0A075B6P5 120 aa14.92□□□□□ -0.02
TSPAN4-202ENST00000397396 A0A1B0GWB2 263 aa14.92□□□□□ -0.02
TSPAN4-202ENST00000397396 A0A1W2PNN7 141 aa14.92□□□□□ -0.02
TSPAN4-202ENST00000397396 IGKV2D-28P01615 120 aa14.92□□□□□ -0.02
TSPAN4-202ENST00000397396 CFC1BP0CG36 223 aa14.92□□□□□ -0.02
TSPAN4-202ENST00000397396 CFC1P0CG37 223 aa14.92□□□□□ -0.02
TSPAN4-202ENST00000397396 BATFQ16520 125 aa14.92□□□□□ -0.02
TSPAN4-202ENST00000397396 PLAC8Q9NZF1 115 aa14.92□□□□□ -0.02
TSPAN4-202ENST00000397396 CBY1Q9Y3M2 126 aa14.92□□□□□ -0.02
TSPAN4-202ENST00000397396 A0A087WYN8 130 aa14.92□□□□□ -0.02
TSPAN4-202ENST00000397396 S100A7L2Q5SY68 101 aa14.92□□□□□ -0.02
TSPAN4-202ENST00000397396 C22orf24Q9Y442 160 aa14.92□□□□□ -0.02
TSPAN4-202ENST00000397396 EPM2AB3EWF7 344 aa14.91□□□□□ -0.02
TSPAN4-202ENST00000397396 MRPL55Q7Z7F7 128 aaKnown RBP14.91□□□□□ -0.02
TSPAN4-202ENST00000397396 TMEM126AQ9H061 195 aa14.91□□□□□ -0.02
TSPAN4-202ENST00000397396 OR13C6PQ8NH95 151 aa14.9□□□□□ -0.02
TSPAN4-202ENST00000397396 PRR3P79522 188 aaKnown RBP14.89□□□□□ -0.03
TSPAN4-202ENST00000397396 LINC00337Q8N6G1 96 aa14.89□□□□□ -0.03
TSPAN4-202ENST00000397396 PRO1854Q9UHT4 67 aa14.89□□□□□ -0.03
TSPAN4-202ENST00000397396 KRTAP7-1Q8IUC3 87 aa14.88□□□□□ -0.03
TSPAN4-202ENST00000397396 C7orf33Q8WU49 177 aa14.87□□□□□ -0.03
TSPAN4-202ENST00000397396 SNHG12Q9BXW3 62 aa14.87□□□□□ -0.03
TSPAN4-202ENST00000397396 IGLV6-57P01721 117 aa14.86□□□□□ -0.03
TSPAN4-202ENST00000397396 FAM30AQ9NZY2 134 aa14.86□□□□□ -0.03
TSPAN4-202ENST00000397396 RPL13AP40429 203 aaKnown RBP14.85□□□□□ -0.03
TSPAN4-202ENST00000397396 EPPK1P58107 5090 aaKnown RBP14.84□□□□□ -0.03
TSPAN4-202ENST00000397396 TRBV10-3A0A0K0K1G6 114 aa14.83□□□□□ -0.04
TSPAN4-202ENST00000397396 K7ERJ3 54 aa14.83□□□□□ -0.04
TSPAN4-202ENST00000397396 LINC00167Q96N53 147 aa14.83□□□□□ -0.04
TSPAN4-202ENST00000397396 GAGE10A6NGK3 116 aa14.82□□□□□ -0.04
TSPAN4-202ENST00000397396 UBE2BP63146 152 aa14.82□□□□□ -0.04
TSPAN4-202ENST00000397396 SCXQ7RTU7 201 aa14.82□□□□□ -0.04
TSPAN4-202ENST00000397396 CIRBP-AS1Q8TBR5 109 aa14.82□□□□□ -0.04
TSPAN4-202ENST00000397396 COL5A1-AS1Q5SY13 56 aa14.81□□□□□ -0.04
TSPAN4-202ENST00000397396 IGLV1-50A0A075B6I6 118 aa14.8□□□□□ -0.04
TSPAN4-202ENST00000397396 Q1RN00 199 aa14.8□□□□□ -0.04
TSPAN4-202ENST00000397396 PHF5AQ7RTV0 110 aaKnown RBP14.8□□□□□ -0.04
TSPAN4-202ENST00000397396 TRAV23DV6A0A075B6W5 121 aa14.78□□□□□ -0.04
TSPAN4-202ENST00000397396 PRYO14603 147 aa14.78□□□□□ -0.04
TSPAN4-202ENST00000397396 KCNQ1DNQ9H478 68 aa14.77□□□□□ -0.04
TSPAN4-202ENST00000397396 H7C2G1 150 aa14.76□□□□□ -0.05
TSPAN4-202ENST00000397396 DNAH8Q96JB1 4490 aa14.76□□□□□ -0.05
TSPAN4-202ENST00000397396 RPL37AP8A6NKH3 93 aa14.75□□□□□ -0.05
TSPAN4-202ENST00000397396 PKHD1P08F94 4074 aa14.73□□□□□ -0.05
TSPAN4-202ENST00000397396 TSPAN13O95857 204 aa14.73□□□□□ -0.05
TSPAN4-202ENST00000397396 RPL28P46779 137 aaKnown RBP14.73□□□□□ -0.05
TSPAN4-202ENST00000397396 SMIM11BQ8TCY0 68 aa14.73□□□□□ -0.05
TSPAN4-202ENST00000397396 DIRC1Q969H9 104 aa14.72□□□□□ -0.05
TSPAN4-202ENST00000397396 LRP1BQ9NZR2 4599 aa14.72□□□□□ -0.05
TSPAN4-202ENST00000397396 DYNC1H1Q14204 4646 aaKnown RBP14.71□□□□□ -0.05
TSPAN4-202ENST00000397396 ZNF73O43830 326 aaPredicted RBP14.71□□□□□ -0.05
TSPAN4-202ENST00000397396 REG3GQ6UW15 175 aa14.71□□□□□ -0.05
TSPAN4-202ENST00000397396 COX6CP09669 75 aa14.69□□□□□ -0.06
TSPAN4-202ENST00000397396 PSMB2P49721 201 aa14.69□□□□□ -0.06
TSPAN4-202ENST00000397396 VAMP3Q15836 100 aa14.69□□□□□ -0.06
TSPAN4-202ENST00000397396 TAX1BP3O14907 124 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms