RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 DNAH6Q9C0G6 4158 aa9.9□□□□□ -0.82
CAPN3-207ENST00000397200 C9JAW5 83 aa9.89□□□□□ -0.83
CAPN3-207ENST00000397200 MALP21145 153 aa9.89□□□□□ -0.83
CAPN3-207ENST00000397200 PFN2P35080 140 aa9.89□□□□□ -0.83
CAPN3-207ENST00000397200 CBY1Q9Y3M2 126 aa9.89□□□□□ -0.83
CAPN3-207ENST00000397200 TRBV10-2A0A0K0K1G8 114 aa9.89□□□□□ -0.83
CAPN3-207ENST00000397200 LINC00337Q8N6G1 96 aa9.89□□□□□ -0.83
CAPN3-207ENST00000397200 J3QR89 54 aa9.88□□□□□ -0.83
CAPN3-207ENST00000397200 RPL28P46779 137 aaKnown RBP9.88□□□□□ -0.83
CAPN3-207ENST00000397200 KRTAP26-1Q6PEX3 210 aa9.88□□□□□ -0.83
CAPN3-207ENST00000397200 C6orf223Q8N319 242 aa9.88□□□□□ -0.83
CAPN3-207ENST00000397200 SPAG11BQ08648 103 aa9.87□□□□□ -0.83
CAPN3-207ENST00000397200 CLEC2BQ92478 149 aa9.87□□□□□ -0.83
CAPN3-207ENST00000397200 VPS25Q9BRG1 176 aa9.87□□□□□ -0.83
CAPN3-207ENST00000397200 HYDINQ4G0P3 5121 aa9.86□□□□□ -0.83
CAPN3-207ENST00000397200 H3BT86 120 aa9.86□□□□□ -0.83
CAPN3-207ENST00000397200 C1orf134Q5TEV5 83 aa9.86□□□□□ -0.83
CAPN3-207ENST00000397200 ANKRD29Q8N6D5 301 aa9.86□□□□□ -0.83
CAPN3-207ENST00000397200 PPDPFLQ8WWR9 84 aa9.86□□□□□ -0.83
CAPN3-207ENST00000397200 GVQW2A0A096LPI5 108 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-207ENST00000397200 PSCAO43653 123 aa9.85□□□□□ -0.83
CAPN3-207ENST00000397200 NDUFC2O95298 119 aa9.85□□□□□ -0.83
CAPN3-207ENST00000397200 CARD19Q96LW7 228 aa9.85□□□□□ -0.83
CAPN3-207ENST00000397200 SACSQ9NZJ4 4579 aa9.84□□□□□ -0.83
CAPN3-207ENST00000397200 TRACP01848 142 aa9.82□□□□□ -0.84
CAPN3-207ENST00000397200 Q6ZRN7 208 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-207ENST00000397200 NTN5Q8WTR8 489 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-207ENST00000397200 KMT2CQ8NEZ4 4911 aaKnown RBP9.82□□□□□ -0.84
CAPN3-207ENST00000397200 C10orf25Q5T742 122 aa9.82□□□□□ -0.84
CAPN3-207ENST00000397200 UNQ6190/PRO20217Q6UXQ8 127 aa9.81□□□□□ -0.84
CAPN3-207ENST00000397200 SMIM11BQ8TCY0 68 aa9.81□□□□□ -0.84
CAPN3-207ENST00000397200 C9orf116Q5BN46 136 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-207ENST00000397200 RYR2Q92736 4967 aa9.79□□□□□ -0.84
CAPN3-207ENST00000397200 FAM218AQ96MZ4 157 aa9.78□□□□□ -0.84
CAPN3-207ENST00000397200 C15orf56Q8N910 161 aa9.78□□□□□ -0.84
CAPN3-207ENST00000397200 RTL8CO15255 209 aa9.77□□□□□ -0.85
CAPN3-207ENST00000397200 C6orf48Q9UBA6 75 aa9.77□□□□□ -0.85
CAPN3-207ENST00000397200 DNAH10Q8IVF4 4471 aa9.76□□□□□ -0.85
CAPN3-207ENST00000397200 USP17L23D6RBM5 183 aa9.76□□□□□ -0.85
CAPN3-207ENST00000397200 H0YGX0 51 aa9.76□□□□□ -0.85
CAPN3-207ENST00000397200 LECT2O14960 151 aa9.76□□□□□ -0.85
CAPN3-207ENST00000397200 LINC00526Q96FQ7 95 aa9.76□□□□□ -0.85
CAPN3-207ENST00000397200 C2orf48Q96LS8 159 aa9.76□□□□□ -0.85
CAPN3-207ENST00000397200 F8WDY8 70 aa9.75□□□□□ -0.85
CAPN3-207ENST00000397200 Q8NDZ9 215 aa9.75□□□□□ -0.85
CAPN3-207ENST00000397200 DNAH2Q9P225 4427 aa9.75□□□□□ -0.85
CAPN3-207ENST00000397200 LRCOL1A6NCL2 159 aa9.74□□□□□ -0.85
CAPN3-207ENST00000397200 HIGD2BQ4VC39 106 aa9.73□□□□□ -0.85
CAPN3-207ENST00000397200 C14orf177Q52M58 125 aa9.73□□□□□ -0.85
CAPN3-207ENST00000397200 OR13C6PQ8NH95 151 aa9.73□□□□□ -0.85
CAPN3-207ENST00000397200 TMEM126AQ9H061 195 aa9.73□□□□□ -0.85
CAPN3-207ENST00000397200 CDIP1Q9H305 208 aa9.73□□□□□ -0.85
CAPN3-207ENST00000397200 FRAS1Q86XX4 4008 aa9.73□□□□□ -0.85
CAPN3-207ENST00000397200 A0A087WTM6 91 aa9.72□□□□□ -0.85
CAPN3-207ENST00000397200 TEX49A0A1B0GTD5 131 aa9.72□□□□□ -0.85
CAPN3-207ENST00000397200 ZNF561-AS1K7EIQ3 104 aa9.72□□□□□ -0.85
CAPN3-207ENST00000397200 TNP2Q05952 138 aa9.72□□□□□ -0.85
CAPN3-207ENST00000397200 PRR3P79522 188 aaKnown RBP9.71□□□□□ -0.85
CAPN3-207ENST00000397200 C22orf24Q9Y442 160 aa9.71□□□□□ -0.85
CAPN3-207ENST00000397200 A0A087WYN8 130 aa9.71□□□□□ -0.86
CAPN3-207ENST00000397200 CAMK2N2Q96S95 79 aa9.71□□□□□ -0.86
CAPN3-207ENST00000397200 LINC00336Q6ZUF6 198 aa9.7□□□□□ -0.86
CAPN3-207ENST00000397200 A0A1B0GX51 115 aa9.69□□□□□ -0.86
CAPN3-207ENST00000397200 Q6ZRU5 148 aa9.69□□□□□ -0.86
CAPN3-207ENST00000397200 Q8N814 137 aa9.69□□□□□ -0.86
CAPN3-207ENST00000397200 LINC00167Q96N53 147 aa9.69□□□□□ -0.86
CAPN3-207ENST00000397200 NCR3O14931 201 aa9.68□□□□□ -0.86
CAPN3-207ENST00000397200 IGLV6-57P01721 117 aa9.67□□□□□ -0.86
CAPN3-207ENST00000397200 BAALC-AS2P0C853 105 aa9.67□□□□□ -0.86
CAPN3-207ENST00000397200 DNAH17Q9UFH2 4485 aa9.67□□□□□ -0.86
CAPN3-207ENST00000397200 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-207ENST00000397200 SIGMAR1Q99720 223 aa9.67□□□□□ -0.86
CAPN3-207ENST00000397200 RYR3Q15413 4870 aa9.66□□□□□ -0.86
CAPN3-207ENST00000397200 FAM240AA0A1B0GVK7 77 aa9.66□□□□□ -0.86
CAPN3-207ENST00000397200 NDUFC2-KCTD14E9PQ53 114 aa9.66□□□□□ -0.86
CAPN3-207ENST00000397200 DNAL4O96015 105 aa9.65□□□□□ -0.86
CAPN3-207ENST00000397200 PCP4P48539 62 aa9.64□□□□□ -0.87
CAPN3-207ENST00000397200 S100A7L2Q5SY68 101 aa9.64□□□□□ -0.87
CAPN3-207ENST00000397200 VPREB1P12018 145 aa9.64□□□□□ -0.87
CAPN3-207ENST00000397200 SYCNQ0VAF6 134 aa9.64□□□□□ -0.87
CAPN3-207ENST00000397200 SLPIP03973 132 aa9.63□□□□□ -0.87
CAPN3-207ENST00000397200 CNBPP62633 177 aaKnown RBP9.63□□□□□ -0.87
CAPN3-207ENST00000397200 RPL18AQ02543 176 aaKnown RBP9.63□□□□□ -0.87
CAPN3-207ENST00000397200 C6orf99Q4VX62 202 aa9.63□□□□□ -0.87
CAPN3-207ENST00000397200 XAGE1AQ9HD64 81 aa9.63□□□□□ -0.87
CAPN3-207ENST00000397200 TLX1NBP0CAT3 122 aa9.62□□□□□ -0.87
CAPN3-207ENST00000397200 SCGB1A1P11684 91 aa9.62□□□□□ -0.87
CAPN3-207ENST00000397200 OBSCN-AS1Q96MR7 158 aa9.62□□□□□ -0.87
CAPN3-207ENST00000397200 XGP55808 180 aa9.61□□□□□ -0.87
CAPN3-207ENST00000397200 Q6ZRP5 223 aa9.6□□□□□ -0.87
CAPN3-207ENST00000397200 FAT2Q9NYQ8 4349 aa9.6□□□□□ -0.87
CAPN3-207ENST00000397200 IGLV5-52A0A0A0MRZ9 124 aa9.6□□□□□ -0.87
CAPN3-207ENST00000397200 INAFM2P0DMQ5 153 aa9.6□□□□□ -0.87
CAPN3-207ENST00000397200 ORMDL1Q9P0S3 153 aa9.6□□□□□ -0.87
CAPN3-207ENST00000397200 TRBV10-3A0A0K0K1G6 114 aa9.59□□□□□ -0.87
CAPN3-207ENST00000397200 LINC00575Q6W349 94 aa9.59□□□□□ -0.87
CAPN3-207ENST00000397200 TRAV23DV6A0A075B6W5 121 aa9.58□□□□□ -0.88
CAPN3-207ENST00000397200 FUSP35637 526 aaKnown RBP eCLIP9.58□□□□□ -0.88
CAPN3-207ENST00000397200 KRTAP10-2P60368 255 aa9.58□□□□□ -0.88
CAPN3-207ENST00000397200 M0R378 163 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms