RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 SCGB3A1Q96QR1 104 aa8.29□□□□□ -1.08
SEC13-206ENST00000397102 MRPL18Q9H0U6 180 aaKnown RBP8.29□□□□□ -1.08
SEC13-206ENST00000397102 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
SEC13-206ENST00000397102 RAB14P61106 215 aa8.28□□□□□ -1.08
SEC13-206ENST00000397102 Q8N377 158 aa8.28□□□□□ -1.08
SEC13-206ENST00000397102 ERG28Q9UKR5 140 aa8.28□□□□□ -1.08
SEC13-206ENST00000397102 ADCYAP1P18509 176 aa8.27□□□□□ -1.09
SEC13-206ENST00000397102 COX17Q14061 63 aa8.27□□□□□ -1.09
SEC13-206ENST00000397102 H3BRM9 83 aa8.26□□□□□ -1.09
SEC13-206ENST00000397102 AKAP14Q86UN6 197 aa8.26□□□□□ -1.09
SEC13-206ENST00000397102 CST9LQ9H4G1 147 aa8.26□□□□□ -1.09
SEC13-206ENST00000397102 KRTAP10-6P60371 365 aaPredicted RBP8.25□□□□□ -1.09
SEC13-206ENST00000397102 IGLV5-39A0A0G2JS06 123 aa8.24□□□□□ -1.09
SEC13-206ENST00000397102 LINC01549A6NIU2 74 aa8.24□□□□□ -1.09
SEC13-206ENST00000397102 SLC25A20O43772 301 aa8.24□□□□□ -1.09
SEC13-206ENST00000397102 PMVKQ15126 192 aa8.23□□□□□ -1.09
SEC13-206ENST00000397102 LINC00483Q53H64 154 aa8.23□□□□□ -1.09
SEC13-206ENST00000397102 SMCR5Q8TEV8 140 aa8.23□□□□□ -1.09
SEC13-206ENST00000397102 PRYO14603 147 aa8.21□□□□□ -1.1
SEC13-206ENST00000397102 MOBPQ13875 183 aa8.21□□□□□ -1.1
SEC13-206ENST00000397102 SSBP3-AS1Q7Z2R9 100 aa8.21□□□□□ -1.1
SEC13-206ENST00000397102 ZNF625Q96I27 306 aaPredicted RBP8.21□□□□□ -1.1
SEC13-206ENST00000397102 SPRR1AP35321 89 aa8.2□□□□□ -1.1
SEC13-206ENST00000397102 IGLV8-61A0A075B6I0 122 aa8.19□□□□□ -1.1
SEC13-206ENST00000397102 IGLV9-49A0A0B4J1Y8 123 aa8.19□□□□□ -1.1
SEC13-206ENST00000397102 IGLC3P0DOY3 106 aa8.19□□□□□ -1.1
SEC13-206ENST00000397102 ANAPC16Q96DE5 110 aa8.19□□□□□ -1.1
SEC13-206ENST00000397102 KRTAP9-7A8MTY7 169 aa8.18□□□□□ -1.1
SEC13-206ENST00000397102 PCOTHQ58A44 107 aa8.18□□□□□ -1.1
SEC13-206ENST00000397102 GAGE2AQ6NT46 116 aa8.18□□□□□ -1.1
SEC13-206ENST00000397102 SFTA2Q6UW10 78 aa8.18□□□□□ -1.1
SEC13-206ENST00000397102 LINC01546A6NGU7 62 aa8.17□□□□□ -1.1
SEC13-206ENST00000397102 KRTAP4-16G5E9R7 235 aaPredicted RBP8.17□□□□□ -1.1
SEC13-206ENST00000397102 MT-ND4LP03901 98 aa8.17□□□□□ -1.1
SEC13-206ENST00000397102 ZNF22P17026 224 aaPredicted RBP8.17□□□□□ -1.1
SEC13-206ENST00000397102 KIAA1644Q3SXP7 199 aa8.17□□□□□ -1.1
SEC13-206ENST00000397102 KCNQ1DNQ9H478 68 aa8.17□□□□□ -1.1
SEC13-206ENST00000397102 ETDCA0A1B0GVM5 59 aa8.16□□□□□ -1.1
SEC13-206ENST00000397102 M0R2T5 61 aa8.14□□□□□ -1.11
SEC13-206ENST00000397102 LINC00158P58513 81 aa8.14□□□□□ -1.11
SEC13-206ENST00000397102 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.13□□□□□ -1.11
SEC13-206ENST00000397102 NCR3O14931 201 aa8.12□□□□□ -1.11
SEC13-206ENST00000397102 SMCPP49901 116 aaPredicted RBP8.12□□□□□ -1.11
SEC13-206ENST00000397102 hCG_2014768A0A024R1R8 64 aa8.11□□□□□ -1.11
SEC13-206ENST00000397102 A0A0U1RRA0 63 aa8.1□□□□□ -1.11
SEC13-206ENST00000397102 B5MCH6 92 aa8.1□□□□□ -1.11
SEC13-206ENST00000397102 ERC2-IT1O76042 136 aa8.1□□□□□ -1.11
SEC13-206ENST00000397102 NDUFA6P56556 154 aa8.1□□□□□ -1.11
SEC13-206ENST00000397102 BOD1L2Q8IYS8 172 aa8.1□□□□□ -1.11
SEC13-206ENST00000397102 TRBV10-3A0A0K0K1G6 114 aa8.09□□□□□ -1.11
SEC13-206ENST00000397102 FA2HQ7L5A8 372 aa8.09□□□□□ -1.11
SEC13-206ENST00000397102 SMCO4Q9NRQ5 59 aa8.09□□□□□ -1.11
SEC13-206ENST00000397102 S100A12P80511 92 aa8.08□□□□□ -1.12
SEC13-206ENST00000397102 TMEM170BQ5T4T1 132 aa8.08□□□□□ -1.12
SEC13-206ENST00000397102 C9orf153Q5TBE3 101 aa8.08□□□□□ -1.12
SEC13-206ENST00000397102 TRAV9-1A0A075B6T8 112 aa8.07□□□□□ -1.12
SEC13-206ENST00000397102 C11orf86A6NJI1 115 aa8.07□□□□□ -1.12
SEC13-206ENST00000397102 C9orf92A6NGG3 77 aa8.06□□□□□ -1.12
SEC13-206ENST00000397102 ATP6V1G1O75348 118 aa8.06□□□□□ -1.12
SEC13-206ENST00000397102 Q9BRP9 147 aa8.06□□□□□ -1.12
SEC13-206ENST00000397102 FLGP20930 4061 aaPredicted RBP8.05□□□□□ -1.12
SEC13-206ENST00000397102 SMIM13P0DJ93 91 aa8.05□□□□□ -1.12
SEC13-206ENST00000397102 A0A096LNJ9 63 aa8.04□□□□□ -1.12
SEC13-206ENST00000397102 COX6B2Q6YFQ2 88 aa8.04□□□□□ -1.12
SEC13-206ENST00000397102 Q6ZRX8 168 aa8.04□□□□□ -1.12
SEC13-206ENST00000397102 MIR7-3HGQ8N6C7 128 aa8.04□□□□□ -1.12
SEC13-206ENST00000397102 LIMD2Q9BT23 127 aa8.04□□□□□ -1.12
SEC13-206ENST00000397102 MEIG1Q5JSS6 88 aa8.03□□□□□ -1.12
SEC13-206ENST00000397102 BAGE3Q86Y29 109 aa8.02□□□□□ -1.13
SEC13-206ENST00000397102 TMEM223A0PJW6 202 aa8□□□□□ -1.13
SEC13-206ENST00000397102 IGLV6-57P01721 117 aa8□□□□□ -1.13
SEC13-206ENST00000397102 HBDP02042 147 aa8□□□□□ -1.13
SEC13-206ENST00000397102 DDTP30046 118 aa8□□□□□ -1.13
SEC13-206ENST00000397102 HERV-K104P63124 156 aa7.99□□□□□ -1.13
SEC13-206ENST00000397102 LINC00587B1AMM8 73 aa7.98□□□□□ -1.13
SEC13-206ENST00000397102 TRBV10-2A0A0K0K1G8 114 aa7.97□□□□□ -1.13
SEC13-206ENST00000397102 FABP9Q0Z7S8 132 aa7.97□□□□□ -1.13
SEC13-206ENST00000397102 JOSD1Q15040 202 aaPredicted RBP7.97□□□□□ -1.13
SEC13-206ENST00000397102 COX19Q49B96 90 aa7.97□□□□□ -1.13
SEC13-206ENST00000397102 URB1-AS1Q96HZ7 61 aa7.97□□□□□ -1.13
SEC13-206ENST00000397102 CHTOPQ9Y3Y2 248 aaKnown RBP7.97□□□□□ -1.13
SEC13-206ENST00000397102 HRCT1Q6UXD1 115 aa7.96□□□□□ -1.14
SEC13-206ENST00000397102 MAP1LC3CQ9BXW4 147 aa7.96□□□□□ -1.14
SEC13-206ENST00000397102 LOC107984156A0A0G2JMH3 177 aa7.95□□□□□ -1.14
SEC13-206ENST00000397102 LINC00614P0C842 121 aa7.95□□□□□ -1.14
SEC13-206ENST00000397102 S100PP25815 95 aa7.95□□□□□ -1.14
SEC13-206ENST00000397102 PMCHL1Q16048 86 aa7.95□□□□□ -1.14
SEC13-206ENST00000397102 ARL17AQ8IVW1 177 aa7.95□□□□□ -1.14
SEC13-206ENST00000397102 ST20-AS1Q8NBB2 130 aa7.95□□□□□ -1.14
SEC13-206ENST00000397102 C5orf52A6NGY3 159 aa7.94□□□□□ -1.14
SEC13-206ENST00000397102 RPL37P61927 97 aaKnown RBP7.94□□□□□ -1.14
SEC13-206ENST00000397102 SSPOA2VEC9 5147 aa7.93□□□□□ -1.14
SEC13-206ENST00000397102 SPANXB1Q9NS25 103 aaPredicted RBP7.93□□□□□ -1.14
SEC13-206ENST00000397102 C18orf32Q8TCD1 76 aa7.92□□□□□ -1.14
SEC13-206ENST00000397102 SEC11CQ9BY50 192 aa7.92□□□□□ -1.14
SEC13-206ENST00000397102 TRAV23DV6A0A075B6W5 121 aa7.91□□□□□ -1.14
SEC13-206ENST00000397102 MYMXA0A1B0GTQ4 84 aa7.91□□□□□ -1.14
SEC13-206ENST00000397102 SPRR1BP22528 89 aa7.91□□□□□ -1.14
SEC13-206ENST00000397102 S100A7L2Q5SY68 101 aa7.91□□□□□ -1.14
SEC13-206ENST00000397102 SLC25A34Q6PIV7 304 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms