RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 ZNF625Q96I27 306 aaPredicted RBP6.61□□□□□ -1.35
NEDD8-202ENST00000396828 CAMK2N2Q96S95 79 aa6.61□□□□□ -1.35
NEDD8-202ENST00000396828 A0A0J9YXY3 114 aa6.6□□□□□ -1.35
NEDD8-202ENST00000396828 RPL37AP61513 92 aaKnown RBP6.6□□□□□ -1.35
NEDD8-202ENST00000396828 MEIG1Q5JSS6 88 aa6.6□□□□□ -1.35
NEDD8-202ENST00000396828 C2orf82Q6UX34 121 aa6.6□□□□□ -1.35
NEDD8-202ENST00000396828 C9orf163Q8N9P6 203 aa6.59□□□□□ -1.35
NEDD8-202ENST00000396828 LINC00526Q96FQ7 95 aa6.59□□□□□ -1.35
NEDD8-202ENST00000396828 HIGD1BQ9P298 99 aa6.59□□□□□ -1.35
NEDD8-202ENST00000396828 TRBV30A0A0K0K1B3 111 aa6.58□□□□□ -1.36
NEDD8-202ENST00000396828 TMEM238C9JI98 176 aa6.58□□□□□ -1.36
NEDD8-202ENST00000396828 SLPIP03973 132 aa6.58□□□□□ -1.36
NEDD8-202ENST00000396828 MT1HL1P0DM35 61 aa6.58□□□□□ -1.36
NEDD8-202ENST00000396828 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
NEDD8-202ENST00000396828 SYCNQ0VAF6 134 aa6.58□□□□□ -1.36
NEDD8-202ENST00000396828 COX17Q14061 63 aa6.58□□□□□ -1.36
NEDD8-202ENST00000396828 UNQ6190/PRO20217Q6UXQ8 127 aa6.58□□□□□ -1.36
NEDD8-202ENST00000396828 SDIM1Q6ZPB5 146 aa6.58□□□□□ -1.36
NEDD8-202ENST00000396828 TP73-AS1Q9UF72 201 aa6.58□□□□□ -1.36
NEDD8-202ENST00000396828 PLA2G2DQ9UNK4 145 aa6.58□□□□□ -1.36
NEDD8-202ENST00000396828 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.57□□□□□ -1.36
NEDD8-202ENST00000396828 TIMM17BO60830 172 aa6.57□□□□□ -1.36
NEDD8-202ENST00000396828 DDTP30046 118 aa6.57□□□□□ -1.36
NEDD8-202ENST00000396828 SRSF9Q13242 221 aaKnown RBP eCLIP6.57□□□□□ -1.36
NEDD8-202ENST00000396828 CARD19Q96LW7 228 aa6.57□□□□□ -1.36
NEDD8-202ENST00000396828 ERG28Q9UKR5 140 aa6.57□□□□□ -1.36
NEDD8-202ENST00000396828 PCP4L1A6NKN8 68 aa6.56□□□□□ -1.36
NEDD8-202ENST00000396828 CHTF8P0CG12 524 aa6.56□□□□□ -1.36
NEDD8-202ENST00000396828 PFN2P35080 140 aa6.56□□□□□ -1.36
NEDD8-202ENST00000396828 LINC00158P58513 81 aa6.56□□□□□ -1.36
NEDD8-202ENST00000396828 C10orf25Q5T742 122 aa6.56□□□□□ -1.36
NEDD8-202ENST00000396828 Q6ZRU5 148 aa6.56□□□□□ -1.36
NEDD8-202ENST00000396828 C2orf91Q6ZV80 131 aa6.56□□□□□ -1.36
NEDD8-202ENST00000396828 LRP2P98164 4655 aa6.55□□□□□ -1.36
NEDD8-202ENST00000396828 A0A0U1RRA0 63 aa6.55□□□□□ -1.36
NEDD8-202ENST00000396828 SMIM13P0DJ93 91 aa6.55□□□□□ -1.36
NEDD8-202ENST00000396828 RNF151Q2KHN1 245 aa6.55□□□□□ -1.36
NEDD8-202ENST00000396828 Q6ZVH6 145 aa6.55□□□□□ -1.36
NEDD8-202ENST00000396828 COPS9Q8WXC6 57 aa6.55□□□□□ -1.36
NEDD8-202ENST00000396828 HIST1H4GQ99525 98 aa6.55□□□□□ -1.36
NEDD8-202ENST00000396828 SPANXB1Q9NS25 103 aaPredicted RBP6.55□□□□□ -1.36
NEDD8-202ENST00000396828 C6orf48Q9UBA6 75 aa6.55□□□□□ -1.36
NEDD8-202ENST00000396828 CNBPP62633 177 aaKnown RBP6.54□□□□□ -1.36
NEDD8-202ENST00000396828 TAL2Q16559 108 aa6.54□□□□□ -1.36
NEDD8-202ENST00000396828 C9orf116Q5BN46 136 aaPredicted RBP6.54□□□□□ -1.36
NEDD8-202ENST00000396828 SPANXDQ9BXN6 97 aa6.54□□□□□ -1.36
NEDD8-202ENST00000396828 SPANXCQ9NY87 97 aa6.54□□□□□ -1.36
NEDD8-202ENST00000396828 PKIGQ9Y2B9 76 aa6.54□□□□□ -1.36
NEDD8-202ENST00000396828 CTAG1AP78358 180 aa6.53□□□□□ -1.36
NEDD8-202ENST00000396828 HSD52Q0P140 79 aa6.53□□□□□ -1.36
NEDD8-202ENST00000396828 ADAMTSL4-AS1Q5T5F5 129 aa6.53□□□□□ -1.36
NEDD8-202ENST00000396828 LITAFQ99732 161 aa6.53□□□□□ -1.36
NEDD8-202ENST00000396828 RNF213Q63HN8 5207 aa6.52□□□□□ -1.37
NEDD8-202ENST00000396828 A0A087WYN8 130 aa6.52□□□□□ -1.37
NEDD8-202ENST00000396828 NDUFC2-KCTD14E9PQ53 114 aa6.52□□□□□ -1.37
NEDD8-202ENST00000396828 IFITM1P13164 125 aa6.52□□□□□ -1.37
NEDD8-202ENST00000396828 MIR7-3HGQ8N6C7 128 aa6.52□□□□□ -1.37
NEDD8-202ENST00000396828 DAND5Q8N907 189 aa6.52□□□□□ -1.37
NEDD8-202ENST00000396828 M0R143 59 aa6.51□□□□□ -1.37
NEDD8-202ENST00000396828 TLX1NBP0CAT3 122 aa6.51□□□□□ -1.37
NEDD8-202ENST00000396828 RPL24P83731 157 aaKnown RBP6.51□□□□□ -1.37
NEDD8-202ENST00000396828 CEND1Q8N111 149 aa6.51□□□□□ -1.37
NEDD8-202ENST00000396828 LOC107984640A0A0U1RRK4 108 aa6.5□□□□□ -1.37
NEDD8-202ENST00000396828 PTTG1IPP53801 180 aa6.5□□□□□ -1.37
NEDD8-202ENST00000396828 NPC2P61916 151 aa6.5□□□□□ -1.37
NEDD8-202ENST00000396828 RPL18AQ02543 176 aaKnown RBP6.5□□□□□ -1.37
NEDD8-202ENST00000396828 MUSTN1Q8IVN3 82 aa6.5□□□□□ -1.37
NEDD8-202ENST00000396828 LINC00308Q8TCZ7 52 aa6.5□□□□□ -1.37
NEDD8-202ENST00000396828 SPACA4Q8TDM5 124 aa6.5□□□□□ -1.37
NEDD8-202ENST00000396828 GAGE2EQ4V326 116 aa6.49□□□□□ -1.37
NEDD8-202ENST00000396828 DPH3Q96FX2 82 aa6.49□□□□□ -1.37
NEDD8-202ENST00000396828 PPDPFQ9H3Y8 114 aa6.49□□□□□ -1.37
NEDD8-202ENST00000396828 SND1-IT1Q9HBX3 110 aa6.49□□□□□ -1.37
NEDD8-202ENST00000396828 GAGE2DQ9UEU5 116 aa6.49□□□□□ -1.37
NEDD8-202ENST00000396828 HINT1P49773 126 aaPredicted RBP6.48□□□□□ -1.37
NEDD8-202ENST00000396828 GAGE2BQ13066 116 aa6.48□□□□□ -1.37
NEDD8-202ENST00000396828 LOC107984156A0A0G2JMH3 177 aa6.47□□□□□ -1.37
NEDD8-202ENST00000396828 BVES-AS1Q5T3Y7 98 aa6.47□□□□□ -1.37
NEDD8-202ENST00000396828 Q6ZRP5 223 aa6.47□□□□□ -1.37
NEDD8-202ENST00000396828 ARL17AQ8IVW1 177 aa6.47□□□□□ -1.37
NEDD8-202ENST00000396828 PLAC8Q9NZF1 115 aa6.47□□□□□ -1.37
NEDD8-202ENST00000396828 BATFQ16520 125 aa6.46□□□□□ -1.38
NEDD8-202ENST00000396828 XAGE1AQ9HD64 81 aa6.46□□□□□ -1.38
NEDD8-202ENST00000396828 LINC00474Q9P2X8 69 aa6.46□□□□□ -1.38
NEDD8-202ENST00000396828 IGKV2-24A0A0C4DH68 120 aa6.45□□□□□ -1.38
NEDD8-202ENST00000396828 A4D1N5 150 aa6.45□□□□□ -1.38
NEDD8-202ENST00000396828 A6NDN8 102 aa6.45□□□□□ -1.38
NEDD8-202ENST00000396828 EIF4EBP3O60516 100 aaPredicted RBP6.45□□□□□ -1.38
NEDD8-202ENST00000396828 FXYD2P54710 66 aa6.45□□□□□ -1.38
NEDD8-202ENST00000396828 SOSTDC1Q6X4U4 206 aa6.45□□□□□ -1.38
NEDD8-202ENST00000396828 NDUFC2O95298 119 aa6.44□□□□□ -1.38
NEDD8-202ENST00000396828 NHP2Q9NX24 153 aaKnown RBP6.44□□□□□ -1.38
NEDD8-202ENST00000396828 LPAP08519 4548 aa6.44□□□□□ -1.38
NEDD8-202ENST00000396828 A0A096LNI7 61 aa6.43□□□□□ -1.38
NEDD8-202ENST00000396828 C9orf129Q5T035 196 aaKnown RBP6.43□□□□□ -1.38
NEDD8-202ENST00000396828 RAB37Q96AX2 223 aa6.43□□□□□ -1.38
NEDD8-202ENST00000396828 PRR3P79522 188 aaKnown RBP6.42□□□□□ -1.38
NEDD8-202ENST00000396828 LINC01600Q96MT4 127 aa6.42□□□□□ -1.38
NEDD8-202ENST00000396828 SNHG12Q9BXW3 62 aa6.42□□□□□ -1.38
NEDD8-202ENST00000396828 TRAV13-2A0A0B4J235 113 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms