RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 M0QXV9 152 aa10.28□□□□□ -0.76
AP1S3-202ENST00000396653 LOC107984156A0A0G2JMH3 177 aa10.27□□□□□ -0.77
AP1S3-202ENST00000396653 Q5VSD8 79 aa10.27□□□□□ -0.77
AP1S3-202ENST00000396653 PCP2Q8IVA1 136 aa10.27□□□□□ -0.77
AP1S3-202ENST00000396653 ARL17AQ8IVW1 177 aa10.27□□□□□ -0.77
AP1S3-202ENST00000396653 RPL24P83731 157 aaKnown RBP10.26□□□□□ -0.77
AP1S3-202ENST00000396653 PYY3Q5JQD4 70 aa10.26□□□□□ -0.77
AP1S3-202ENST00000396653 PHF5AQ7RTV0 110 aaKnown RBP10.26□□□□□ -0.77
AP1S3-202ENST00000396653 LITAFQ99732 161 aa10.26□□□□□ -0.77
AP1S3-202ENST00000396653 KRTAP17-1Q9BYP8 105 aa10.26□□□□□ -0.77
AP1S3-202ENST00000396653 PLA2G1BP04054 148 aaKnown RBP10.25□□□□□ -0.77
AP1S3-202ENST00000396653 VPREB1P12018 145 aa10.25□□□□□ -0.77
AP1S3-202ENST00000396653 VAMP8Q9BV40 100 aa10.25□□□□□ -0.77
AP1S3-202ENST00000396653 C22orf24Q9Y442 160 aa10.25□□□□□ -0.77
AP1S3-202ENST00000396653 FAT1Q14517 4588 aa10.24□□□□□ -0.77
AP1S3-202ENST00000396653 LBHQ53QV2 105 aaPredicted RBP10.24□□□□□ -0.77
AP1S3-202ENST00000396653 SCGB1D4Q6XE38 83 aa10.24□□□□□ -0.77
AP1S3-202ENST00000396653 NKAPP1Q8N9T2 125 aa10.24□□□□□ -0.77
AP1S3-202ENST00000396653 TMEM238C9JI98 176 aa10.23□□□□□ -0.77
AP1S3-202ENST00000396653 RPL37AP61513 92 aaKnown RBP10.23□□□□□ -0.77
AP1S3-202ENST00000396653 ADAMTSL4-AS1Q5T5F5 129 aa10.23□□□□□ -0.77
AP1S3-202ENST00000396653 MRPL55Q7Z7F7 128 aaKnown RBP10.23□□□□□ -0.77
AP1S3-202ENST00000396653 DAND5Q8N907 189 aa10.23□□□□□ -0.77
AP1S3-202ENST00000396653 MIEN1Q9BRT3 115 aa10.23□□□□□ -0.77
AP1S3-202ENST00000396653 BOD1L2Q8IYS8 172 aa10.22□□□□□ -0.77
AP1S3-202ENST00000396653 COX8AP10176 69 aa10.21□□□□□ -0.77
AP1S3-202ENST00000396653 SPATA45Q537H7 98 aa10.21□□□□□ -0.77
AP1S3-202ENST00000396653 SPANXDQ9BXN6 97 aa10.21□□□□□ -0.77
AP1S3-202ENST00000396653 SPANXCQ9NY87 97 aa10.21□□□□□ -0.77
AP1S3-202ENST00000396653 PAM16Q9Y3D7 125 aa10.21□□□□□ -0.77
AP1S3-202ENST00000396653 VPS13BQ7Z7G8 4022 aa10.2□□□□□ -0.78
AP1S3-202ENST00000396653 DLEU1O43261 78 aa10.2□□□□□ -0.78
AP1S3-202ENST00000396653 KRTAP10-4P60372 401 aaPredicted RBP10.2□□□□□ -0.78
AP1S3-202ENST00000396653 UBE2BP63146 152 aa10.2□□□□□ -0.78
AP1S3-202ENST00000396653 Q6ZVH6 145 aa10.2□□□□□ -0.78
AP1S3-202ENST00000396653 Q8NDZ9 215 aa10.2□□□□□ -0.78
AP1S3-202ENST00000396653 PPDPFQ9H3Y8 114 aa10.2□□□□□ -0.78
AP1S3-202ENST00000396653 NDUFC2O95298 119 aa10.19□□□□□ -0.78
AP1S3-202ENST00000396653 PRR3P79522 188 aaKnown RBP10.19□□□□□ -0.78
AP1S3-202ENST00000396653 SOSTDC1Q6X4U4 206 aa10.19□□□□□ -0.78
AP1S3-202ENST00000396653 LINC00308Q8TCZ7 52 aa10.18□□□□□ -0.78
AP1S3-202ENST00000396653 COPS9Q8WXC6 57 aa10.18□□□□□ -0.78
AP1S3-202ENST00000396653 LINC00167Q96N53 147 aa10.18□□□□□ -0.78
AP1S3-202ENST00000396653 M0R378 163 aa10.17□□□□□ -0.78
AP1S3-202ENST00000396653 IFITM1P13164 125 aa10.17□□□□□ -0.78
AP1S3-202ENST00000396653 SPANXB1Q9NS25 103 aaPredicted RBP10.17□□□□□ -0.78
AP1S3-202ENST00000396653 PSORS1C2Q9UIG4 136 aa10.17□□□□□ -0.78
AP1S3-202ENST00000396653 TRBV10-2A0A0K0K1G8 114 aa10.16□□□□□ -0.78
AP1S3-202ENST00000396653 NPC2P61916 151 aa10.16□□□□□ -0.78
AP1S3-202ENST00000396653 KRTAP11-1Q8IUC1 163 aa10.16□□□□□ -0.78
AP1S3-202ENST00000396653 KRTAP4-5Q9BYR2 181 aa10.15□□□□□ -0.78
AP1S3-202ENST00000396653 GAGE10A6NGK3 116 aa10.14□□□□□ -0.79
AP1S3-202ENST00000396653 EIF4EBP3O60516 100 aaPredicted RBP10.14□□□□□ -0.79
AP1S3-202ENST00000396653 C14orf144Q96I85 54 aa10.14□□□□□ -0.79
AP1S3-202ENST00000396653 IGLV1-50A0A075B6I6 118 aa10.13□□□□□ -0.79
AP1S3-202ENST00000396653 NCR3O14931 201 aa10.13□□□□□ -0.79
AP1S3-202ENST00000396653 S100A12P80511 92 aa10.13□□□□□ -0.79
AP1S3-202ENST00000396653 SLC25A34Q6PIV7 304 aa10.13□□□□□ -0.79
AP1S3-202ENST00000396653 RPL37AP8A6NKH3 93 aa10.12□□□□□ -0.79
AP1S3-202ENST00000396653 C1orf137Q5JT78 98 aa10.12□□□□□ -0.79
AP1S3-202ENST00000396653 SMIM6P0DI80 62 aa10.11□□□□□ -0.79
AP1S3-202ENST00000396653 HIGD1BQ9P298 99 aa10.11□□□□□ -0.79
AP1S3-202ENST00000396653 IGKV2-28A0A075B6P5 120 aa10.1□□□□□ -0.79
AP1S3-202ENST00000396653 IGKV2D-28P01615 120 aa10.1□□□□□ -0.79
AP1S3-202ENST00000396653 SRSF9Q13242 221 aaKnown RBP eCLIP10.1□□□□□ -0.79
AP1S3-202ENST00000396653 LOC105371267A0A1B0GV96 52 aa10.09□□□□□ -0.79
AP1S3-202ENST00000396653 MUSTN1Q8IVN3 82 aa10.09□□□□□ -0.79
AP1S3-202ENST00000396653 LINC00518Q8N0U6 118 aa10.09□□□□□ -0.79
AP1S3-202ENST00000396653 PKHD1L1Q86WI1 4243 aa10.09□□□□□ -0.79
AP1S3-202ENST00000396653 TRBV10-3A0A0K0K1G6 114 aa10.08□□□□□ -0.8
AP1S3-202ENST00000396653 PRYO14603 147 aa10.08□□□□□ -0.8
AP1S3-202ENST00000396653 IGLV7-43P04211 117 aa10.08□□□□□ -0.8
AP1S3-202ENST00000396653 INAFM2P0DMQ5 153 aa10.08□□□□□ -0.8
AP1S3-202ENST00000396653 BCE1O60756 84 aa10.07□□□□□ -0.8
AP1S3-202ENST00000396653 IGLV6-57P01721 117 aa10.07□□□□□ -0.8
AP1S3-202ENST00000396653 DDTP30046 118 aa10.07□□□□□ -0.8
AP1S3-202ENST00000396653 HNRNPA3P51991 378 aaKnown RBP10.07□□□□□ -0.8
AP1S3-202ENST00000396653 REG3GQ6UW15 175 aa10.07□□□□□ -0.8
AP1S3-202ENST00000396653 C2orf91Q6ZV80 131 aa10.07□□□□□ -0.8
AP1S3-202ENST00000396653 KCNQ1DNQ9H478 68 aa10.07□□□□□ -0.8
AP1S3-202ENST00000396653 S100A7L2Q5SY68 101 aa10.06□□□□□ -0.8
AP1S3-202ENST00000396653 TMEM126AQ9H061 195 aa10.06□□□□□ -0.8
AP1S3-202ENST00000396653 CBY1Q9Y3M2 126 aa10.06□□□□□ -0.8
AP1S3-202ENST00000396653 SPINK6Q6UWN8 80 aa10.05□□□□□ -0.8
AP1S3-202ENST00000396653 HIST1H4GQ99525 98 aa10.05□□□□□ -0.8
AP1S3-202ENST00000396653 SPRR1AP35321 89 aa10.04□□□□□ -0.8
AP1S3-202ENST00000396653 UQCR10Q9UDW1 63 aa10.04□□□□□ -0.8
AP1S3-202ENST00000396653 TAL2Q16559 108 aa10.03□□□□□ -0.8
AP1S3-202ENST00000396653 SRRM2Q9UQ35 2752 aaKnown RBP10.02□□□□□ -0.81
AP1S3-202ENST00000396653 ZNF861PO60384 105 aa10.02□□□□□ -0.81
AP1S3-202ENST00000396653 RPL28P46779 137 aaKnown RBP10.02□□□□□ -0.81
AP1S3-202ENST00000396653 LINC00337Q8N6G1 96 aa10.02□□□□□ -0.81
AP1S3-202ENST00000396653 TRAV23DV6A0A075B6W5 121 aa10.01□□□□□ -0.81
AP1S3-202ENST00000396653 KRTAP13-1Q8IUC0 172 aa10.01□□□□□ -0.81
AP1S3-202ENST00000396653 ABCA13Q86UQ4 5058 aa10□□□□□ -0.81
AP1S3-202ENST00000396653 A4D1N5 150 aa10□□□□□ -0.81
AP1S3-202ENST00000396653 UBE2AP49459 152 aa10□□□□□ -0.81
AP1S3-202ENST00000396653 OR13C6PQ8NH95 151 aa10□□□□□ -0.81
AP1S3-202ENST00000396653 DIRC1Q969H9 104 aa10□□□□□ -0.81
AP1S3-202ENST00000396653 TRAV13-2A0A0B4J235 113 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms