RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 PRR34Q9NV39 138 aa10.6□□□□□ -0.71
HOXA3-202ENST00000396352 LYPD5Q6UWN5 251 aa10.6□□□□□ -0.71
HOXA3-202ENST00000396352 MUC7Q8TAX7 377 aa10.6□□□□□ -0.71
HOXA3-202ENST00000396352 IGLV6-57P01721 117 aa10.6□□□□□ -0.71
HOXA3-202ENST00000396352 hADV29S1A0JD25 119 aa10.59□□□□□ -0.71
HOXA3-202ENST00000396352 SERP2Q8N6R1 65 aa10.59□□□□□ -0.71
HOXA3-202ENST00000396352 MIFP14174 115 aa10.59□□□□□ -0.71
HOXA3-202ENST00000396352 UPK3BQ9BT76 320 aa10.59□□□□□ -0.71
HOXA3-202ENST00000396352 FASNP49327 2511 aaKnown RBP10.58□□□□□ -0.72
HOXA3-202ENST00000396352 ATP5EP2Q5VTU8 51 aa10.58□□□□□ -0.72
HOXA3-202ENST00000396352 HELZ2Q9BYK8 2649 aaKnown RBP10.58□□□□□ -0.72
HOXA3-202ENST00000396352 ENHOQ6UWT2 76 aa10.58□□□□□ -0.72
HOXA3-202ENST00000396352 KLK12Q9UKR0 248 aa10.58□□□□□ -0.72
HOXA3-202ENST00000396352 HTN3P15516 51 aa10.57□□□□□ -0.72
HOXA3-202ENST00000396352 WFDC9Q8NEX5 89 aa10.57□□□□□ -0.72
HOXA3-202ENST00000396352 Q6ZQT0 140 aa10.57□□□□□ -0.72
HOXA3-202ENST00000396352 ZNF561-AS1K7EIQ3 104 aa10.56□□□□□ -0.72
HOXA3-202ENST00000396352 HIVEP1P15822 2718 aa10.56□□□□□ -0.72
HOXA3-202ENST00000396352 SPART-AS1P0CW21 52 aa10.56□□□□□ -0.72
HOXA3-202ENST00000396352 GVQW2A0A096LPI5 108 aaPredicted RBP10.55□□□□□ -0.72
HOXA3-202ENST00000396352 LOC110117498A0A087WWA1 95 aa10.55□□□□□ -0.72
HOXA3-202ENST00000396352 RBM3P98179 157 aaKnown RBP10.54□□□□□ -0.72
HOXA3-202ENST00000396352 FAM19A1Q7Z5A9 133 aa10.54□□□□□ -0.72
HOXA3-202ENST00000396352 C6orf48Q9UBA6 75 aa10.54□□□□□ -0.72
HOXA3-202ENST00000396352 UBL5Q9BZL1 73 aa10.53□□□□□ -0.72
HOXA3-202ENST00000396352 TRRAPQ9Y4A5 3859 aa10.53□□□□□ -0.72
HOXA3-202ENST00000396352 OTOGQ6ZRI0 2925 aa10.53□□□□□ -0.72
HOXA3-202ENST00000396352 M0R2N4 97 aa10.53□□□□□ -0.72
HOXA3-202ENST00000396352 TRBV10-3A0A0K0K1G6 114 aa10.52□□□□□ -0.72
HOXA3-202ENST00000396352 C4orf48Q5BLP8 95 aa10.52□□□□□ -0.73
HOXA3-202ENST00000396352 J3QKU1 62 aa10.52□□□□□ -0.73
HOXA3-202ENST00000396352 Q6ZQY7 126 aa10.52□□□□□ -0.73
HOXA3-202ENST00000396352 LAMTOR3Q9UHA4 124 aa10.51□□□□□ -0.73
HOXA3-202ENST00000396352 NSD1Q96L73 2696 aaPredicted RBP10.51□□□□□ -0.73
HOXA3-202ENST00000396352 XAGE1AQ9HD64 81 aa10.51□□□□□ -0.73
HOXA3-202ENST00000396352 TRAV23DV6A0A075B6W5 121 aa10.5□□□□□ -0.73
HOXA3-202ENST00000396352 LOC107984640A0A0U1RRK4 108 aa10.5□□□□□ -0.73
HOXA3-202ENST00000396352 NOTCH2Q04721 2471 aa10.49□□□□□ -0.73
HOXA3-202ENST00000396352 INAFM1C9JVW0 142 aa10.49□□□□□ -0.73
HOXA3-202ENST00000396352 GHRHP01286 108 aa10.48□□□□□ -0.73
HOXA3-202ENST00000396352 J3KT08 172 aa10.48□□□□□ -0.73
HOXA3-202ENST00000396352 DIRC1Q969H9 104 aa10.48□□□□□ -0.73
HOXA3-202ENST00000396352 TMEM258P61165 79 aa10.47□□□□□ -0.73
HOXA3-202ENST00000396352 KMT2BQ9UMN6 2715 aaPredicted RBP10.46□□□□□ -0.73
HOXA3-202ENST00000396352 ZNF73O43830 326 aaPredicted RBP10.46□□□□□ -0.73
HOXA3-202ENST00000396352 KRTAP26-1Q6PEX3 210 aa10.46□□□□□ -0.74
HOXA3-202ENST00000396352 DSCR8Q96T75 97 aa10.46□□□□□ -0.74
HOXA3-202ENST00000396352 WFDC10BQ8IUB3 73 aa10.45□□□□□ -0.74
HOXA3-202ENST00000396352 LINC01547P58512 204 aaPredicted RBP10.45□□□□□ -0.74
HOXA3-202ENST00000396352 Q6ZVQ6 151 aa10.45□□□□□ -0.74
HOXA3-202ENST00000396352 TEP1Q99973 2627 aaKnown RBP10.45□□□□□ -0.74
HOXA3-202ENST00000396352 H3BQ85 93 aa10.45□□□□□ -0.74
HOXA3-202ENST00000396352 ELOF1P60002 83 aaKnown RBP10.45□□□□□ -0.74
HOXA3-202ENST00000396352 HIGD2BQ4VC39 106 aa10.45□□□□□ -0.74
HOXA3-202ENST00000396352 VPREB1P12018 145 aa10.44□□□□□ -0.74
HOXA3-202ENST00000396352 RPS28P62857 69 aaKnown RBP10.44□□□□□ -0.74
HOXA3-202ENST00000396352 ATRQ13535 2644 aa10.44□□□□□ -0.74
HOXA3-202ENST00000396352 WIPF1O43516 503 aa10.44□□□□□ -0.74
HOXA3-202ENST00000396352 COX7BP24311 80 aa10.43□□□□□ -0.74
HOXA3-202ENST00000396352 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.43□□□□□ -0.74
HOXA3-202ENST00000396352 PDE6GP18545 87 aa10.43□□□□□ -0.74
HOXA3-202ENST00000396352 CAMK2N2Q96S95 79 aa10.42□□□□□ -0.74
HOXA3-202ENST00000396352 TRBV7-4A0A0J9YYF1 115 aa10.42□□□□□ -0.74
HOXA3-202ENST00000396352 TRBV7-6A0A0J9YX20 115 aa10.41□□□□□ -0.74
HOXA3-202ENST00000396352 DPH3Q96FX2 82 aa10.41□□□□□ -0.74
HOXA3-202ENST00000396352 C15orf56Q8N910 161 aa10.41□□□□□ -0.74
HOXA3-202ENST00000396352 Q6ZRU5 148 aa10.41□□□□□ -0.74
HOXA3-202ENST00000396352 EGFEM1PQ0D2K5 195 aa10.4□□□□□ -0.74
HOXA3-202ENST00000396352 KPRPQ5T749 579 aaPredicted RBP10.4□□□□□ -0.74
HOXA3-202ENST00000396352 HECTD1Q9ULT8 2610 aa10.4□□□□□ -0.74
HOXA3-202ENST00000396352 PKD1L1Q8TDX9 2849 aa10.4□□□□□ -0.74
HOXA3-202ENST00000396352 HAMPP81172 84 aa10.4□□□□□ -0.74
HOXA3-202ENST00000396352 H3BNG1 76 aa10.39□□□□□ -0.75
HOXA3-202ENST00000396352 FAM19A5Q7Z5A7 132 aaPredicted RBP10.39□□□□□ -0.75
HOXA3-202ENST00000396352 RETNQ9HD89 108 aa10.39□□□□□ -0.75
HOXA3-202ENST00000396352 CXCL6P80162 114 aa10.38□□□□□ -0.75
HOXA3-202ENST00000396352 M0R378 163 aa10.38□□□□□ -0.75
HOXA3-202ENST00000396352 NDUFC2-KCTD14E9PQ53 114 aa10.37□□□□□ -0.75
HOXA3-202ENST00000396352 OXTP01178 125 aa10.37□□□□□ -0.75
HOXA3-202ENST00000396352 LINC00528Q8N1L1 170 aa10.37□□□□□ -0.75
HOXA3-202ENST00000396352 ANK2Q01484 3957 aa10.37□□□□□ -0.75
HOXA3-202ENST00000396352 BCE1O60756 84 aa10.36□□□□□ -0.75
HOXA3-202ENST00000396352 Q6ZTC4 211 aa10.36□□□□□ -0.75
HOXA3-202ENST00000396352 C20orf197Q8N268 126 aa10.36□□□□□ -0.75
HOXA3-202ENST00000396352 TRAV10A0A0B4J240 114 aa10.35□□□□□ -0.75
HOXA3-202ENST00000396352 TRAV7A0A075B6U4 112 aa10.34□□□□□ -0.75
HOXA3-202ENST00000396352 Q6ZRP5 223 aa10.34□□□□□ -0.75
HOXA3-202ENST00000396352 ESRGQ1W209 222 aa10.34□□□□□ -0.75
HOXA3-202ENST00000396352 KRTAP10-11P60412 298 aa10.31□□□□□ -0.76
HOXA3-202ENST00000396352 SCXQ7RTU7 201 aa10.31□□□□□ -0.76
HOXA3-202ENST00000396352 C1orf43Q9BWL3 253 aa10.3□□□□□ -0.76
HOXA3-202ENST00000396352 TENM3Q9P273 2699 aa10.3□□□□□ -0.76
HOXA3-202ENST00000396352 LINC01556Q5JQF7 62 aa10.28□□□□□ -0.76
HOXA3-202ENST00000396352 H7BZZ5 65 aa10.28□□□□□ -0.76
HOXA3-202ENST00000396352 IGKV2D-24A0A075B6R9 120 aa10.27□□□□□ -0.77
HOXA3-202ENST00000396352 KLKP1Q107X0 134 aa10.27□□□□□ -0.77
HOXA3-202ENST00000396352 SYCNQ0VAF6 134 aa10.26□□□□□ -0.77
HOXA3-202ENST00000396352 CMYA5Q8N3K9 4069 aa10.26□□□□□ -0.77
HOXA3-202ENST00000396352 F8WDY8 70 aa10.26□□□□□ -0.77
HOXA3-202ENST00000396352 SERTAD4-AS1Q5TG53 156 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms