RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 TRAV23DV6A0A075B6W5 121 aa2.37□□□□□ -2.03
VPS13C-203ENST00000395896 RPL37AP8A6NKH3 93 aa2.37□□□□□ -2.03
VPS13C-203ENST00000395896 TRIAP1O43715 76 aa2.37□□□□□ -2.03
VPS13C-203ENST00000395896 TCL1BO95988 128 aa2.37□□□□□ -2.03
VPS13C-203ENST00000395896 COL7A1Q02388 2944 aa2.37□□□□□ -2.03
VPS13C-203ENST00000395896 DNAH10OSP0CZ25 163 aa2.37□□□□□ -2.03
VPS13C-203ENST00000395896 ANAPC13Q9BS18 74 aa2.37□□□□□ -2.03
VPS13C-203ENST00000395896 PRR34Q9NV39 138 aa2.37□□□□□ -2.03
VPS13C-203ENST00000395896 LOC107984640A0A0U1RRK4 108 aa2.37□□□□□ -2.03
VPS13C-203ENST00000395896 CDK2AP2O75956 126 aa2.37□□□□□ -2.03
VPS13C-203ENST00000395896 ZNF73O43830 326 aaPredicted RBP2.36□□□□□ -2.03
VPS13C-203ENST00000395896 KRTAP24-1Q3LI83 254 aa2.36□□□□□ -2.03
VPS13C-203ENST00000395896 ZNF469Q96JG9 3925 aaPredicted RBP2.36□□□□□ -2.03
VPS13C-203ENST00000395896 ATOX1O00244 68 aa2.36□□□□□ -2.03
VPS13C-203ENST00000395896 C6orf99Q4VX62 202 aa2.36□□□□□ -2.03
VPS13C-203ENST00000395896 LINC00694P0DN24 101 aa2.36□□□□□ -2.03
VPS13C-203ENST00000395896 NTM-AS1Q6ZSK4 140 aa2.36□□□□□ -2.03
VPS13C-203ENST00000395896 SS18L2Q9UHA2 77 aa2.36□□□□□ -2.03
VPS13C-203ENST00000395896 B9D2Q9BPU9 175 aa2.36□□□□□ -2.03
VPS13C-203ENST00000395896 G3V4G9 280 aa2.36□□□□□ -2.03
VPS13C-203ENST00000395896 ZNF706Q9Y5V0 76 aaPredicted RBP2.36□□□□□ -2.03
VPS13C-203ENST00000395896 IGLV4-60A0A075B6I1 120 aa2.35□□□□□ -2.03
VPS13C-203ENST00000395896 NDUFB1O75438 58 aa2.35□□□□□ -2.03
VPS13C-203ENST00000395896 GIG44P09565 113 aaPredicted RBP2.35□□□□□ -2.03
VPS13C-203ENST00000395896 WFDC2Q14508 124 aa2.35□□□□□ -2.03
VPS13C-203ENST00000395896 HIST1H4AP62805 103 aaKnown RBP2.35□□□□□ -2.03
VPS13C-203ENST00000395896 NREPQ16612 68 aa2.35□□□□□ -2.03
VPS13C-203ENST00000395896 LOC100131303A0A0U1RQF7 123 aa2.35□□□□□ -2.03
VPS13C-203ENST00000395896 NANOS2P60321 138 aaKnown RBP2.35□□□□□ -2.03
VPS13C-203ENST00000395896 HAMPP81172 84 aa2.35□□□□□ -2.03
VPS13C-203ENST00000395896 Q6ZSN1 163 aa2.35□□□□□ -2.03
VPS13C-203ENST00000395896 UBE2AP49459 152 aa2.34□□□□□ -2.03
VPS13C-203ENST00000395896 PRM2P04554 102 aa2.34□□□□□ -2.03
VPS13C-203ENST00000395896 Q6Q795 121 aa2.34□□□□□ -2.03
VPS13C-203ENST00000395896 C7orf33Q8WU49 177 aa2.34□□□□□ -2.03
VPS13C-203ENST00000395896 TM2D3Q9BRN9 247 aa2.34□□□□□ -2.03
VPS13C-203ENST00000395896 PLAC8L1A1L4L8 177 aa2.34□□□□□ -2.03
VPS13C-203ENST00000395896 XAGE1AQ9HD64 81 aa2.34□□□□□ -2.03
VPS13C-203ENST00000395896 C4orf48Q5BLP8 95 aa2.34□□□□□ -2.03
VPS13C-203ENST00000395896 UPK3BQ9BT76 320 aa2.34□□□□□ -2.04
VPS13C-203ENST00000395896 SBSPONQ8IVN8 264 aa2.34□□□□□ -2.04
VPS13C-203ENST00000395896 PRYO14603 147 aa2.34□□□□□ -2.04
VPS13C-203ENST00000395896 SMIM11BQ8TCY0 68 aa2.34□□□□□ -2.04
VPS13C-203ENST00000395896 UNQ6190/PRO20217Q6UXQ8 127 aa2.33□□□□□ -2.04
VPS13C-203ENST00000395896 TEX49A0A1B0GTD5 131 aa2.33□□□□□ -2.04
VPS13C-203ENST00000395896 Q8N814 137 aa2.33□□□□□ -2.04
VPS13C-203ENST00000395896 ADAMTSL4-AS1Q5T5F5 129 aa2.33□□□□□ -2.04
VPS13C-203ENST00000395896 ZNF575Q86XF7 245 aa2.33□□□□□ -2.04
VPS13C-203ENST00000395896 TRBV10-3A0A0K0K1G6 114 aa2.33□□□□□ -2.04
VPS13C-203ENST00000395896 TSPEAR-AS2P59090 65 aa2.33□□□□□ -2.04
VPS13C-203ENST00000395896 COX6A2Q02221 97 aa2.33□□□□□ -2.04
VPS13C-203ENST00000395896 CLEC2BQ92478 149 aa2.33□□□□□ -2.04
VPS13C-203ENST00000395896 USP17L23D6RBM5 183 aa2.33□□□□□ -2.04
VPS13C-203ENST00000395896 Q6JHZ5 121 aa2.33□□□□□ -2.04
VPS13C-203ENST00000395896 WFDC10BQ8IUB3 73 aa2.33□□□□□ -2.04
VPS13C-203ENST00000395896 NDUFC1O43677 76 aa2.33□□□□□ -2.04
VPS13C-203ENST00000395896 ESRGQ1W209 222 aa2.32□□□□□ -2.04
VPS13C-203ENST00000395896 Q6ZQY7 126 aa2.32□□□□□ -2.04
VPS13C-203ENST00000395896 MRPL55Q7Z7F7 128 aaKnown RBP2.32□□□□□ -2.04
VPS13C-203ENST00000395896 CCKP06307 115 aa2.32□□□□□ -2.04
VPS13C-203ENST00000395896 LINC00337Q8N6G1 96 aa2.32□□□□□ -2.04
VPS13C-203ENST00000395896 BPY2O14599 106 aa2.32□□□□□ -2.04
VPS13C-203ENST00000395896 AKAP9Q99996 3911 aa2.31□□□□□ -2.04
VPS13C-203ENST00000395896 IGKV2-24A0A0C4DH68 120 aa2.31□□□□□ -2.04
VPS13C-203ENST00000395896 MP68P56378 58 aa2.31□□□□□ -2.04
VPS13C-203ENST00000395896 UQCRQO14949 82 aa2.31□□□□□ -2.04
VPS13C-203ENST00000395896 HIGD2AQ9BW72 106 aa2.31□□□□□ -2.04
VPS13C-203ENST00000395896 C16orf90A8MZG2 172 aa2.31□□□□□ -2.04
VPS13C-203ENST00000395896 NDUFV3P56181 108 aaKnown RBP2.31□□□□□ -2.04
VPS13C-203ENST00000395896 IGLV6-57P01721 117 aa2.31□□□□□ -2.04
VPS13C-203ENST00000395896 TLX1NBP0CAT3 122 aa2.31□□□□□ -2.04
VPS13C-203ENST00000395896 C14orf132Q9NPU4 83 aa2.31□□□□□ -2.04
VPS13C-203ENST00000395896 REG3GQ6UW15 175 aa2.31□□□□□ -2.04
VPS13C-203ENST00000395896 LINC00575Q6W349 94 aa2.31□□□□□ -2.04
VPS13C-203ENST00000395896 CELA1Q9UNI1 258 aa2.31□□□□□ -2.04
VPS13C-203ENST00000395896 RPL37AP61513 92 aaKnown RBP2.3□□□□□ -2.04
VPS13C-203ENST00000395896 FAM236AA0A1B0GUQ0 79 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 FAM236BA0A1B0GV22 79 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 WWC2-AS2Q96NR7 200 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 Q9UF83 564 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 IGKV2-28A0A075B6P5 120 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 IGKV2D-28P01615 120 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 LITAFQ99732 161 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 C9orf153Q5TBE3 101 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 MDFIQ99750 246 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 C3orf84H3BNL1 204 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 ENHOQ6UWT2 76 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 LINC00588Q9Y4M8 146 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 NBDYA0A0U1RRE5 68 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 K7EIL1 84 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 C10orf25Q5T742 122 aa2.3□□□□□ -2.04
VPS13C-203ENST00000395896 PLA2G2DQ9UNK4 145 aa2.29□□□□□ -2.04
VPS13C-203ENST00000395896 NCR3O14931 201 aa2.29□□□□□ -2.04
VPS13C-203ENST00000395896 C6orf223Q8N319 242 aa2.29□□□□□ -2.04
VPS13C-203ENST00000395896 CXCL6P80162 114 aa2.29□□□□□ -2.04
VPS13C-203ENST00000395896 C1orf134Q5TEV5 83 aa2.29□□□□□ -2.04
VPS13C-203ENST00000395896 ATP5EP56381 51 aaPredicted RBP2.29□□□□□ -2.04
VPS13C-203ENST00000395896 ELOF1P60002 83 aaKnown RBP2.29□□□□□ -2.04
VPS13C-203ENST00000395896 CNBPP62633 177 aaKnown RBP2.29□□□□□ -2.04
VPS13C-203ENST00000395896 Q6ZRU5 148 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms