RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 IGKV3OR2-268A0A0C4DH90 116 aa9.28□□□□□ -0.92
CDC42SE2-202ENST00000395246 C1orf43Q9BWL3 253 aa9.28□□□□□ -0.92
CDC42SE2-202ENST00000395246 TOMM7Q9P0U1 55 aa9.28□□□□□ -0.92
CDC42SE2-202ENST00000395246 SMIM11BQ8TCY0 68 aa9.28□□□□□ -0.92
CDC42SE2-202ENST00000395246 VPREB1P12018 145 aa9.27□□□□□ -0.93
CDC42SE2-202ENST00000395246 PSMB2P49721 201 aa9.27□□□□□ -0.93
CDC42SE2-202ENST00000395246 NBEAL1Q6ZS30 2694 aa9.27□□□□□ -0.93
CDC42SE2-202ENST00000395246 SDIM1Q6ZPB5 146 aa9.26□□□□□ -0.93
CDC42SE2-202ENST00000395246 Q6ZRN7 208 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE2-202ENST00000395246 TMEM126AQ9H061 195 aa9.26□□□□□ -0.93
CDC42SE2-202ENST00000395246 ANKRD29Q8N6D5 301 aa9.26□□□□□ -0.93
CDC42SE2-202ENST00000395246 K7ERU9 68 aa9.25□□□□□ -0.93
CDC42SE2-202ENST00000395246 SLC25A20O43772 301 aa9.25□□□□□ -0.93
CDC42SE2-202ENST00000395246 SLPIP03973 132 aa9.25□□□□□ -0.93
CDC42SE2-202ENST00000395246 DNAH17Q9UFH2 4485 aa9.25□□□□□ -0.93
CDC42SE2-202ENST00000395246 Q6ZRU5 148 aa9.24□□□□□ -0.93
CDC42SE2-202ENST00000395246 KRTAP1-5Q9BYS1 174 aa9.24□□□□□ -0.93
CDC42SE2-202ENST00000395246 FAM218AQ96MZ4 157 aa9.24□□□□□ -0.93
CDC42SE2-202ENST00000395246 NPC2P61916 151 aa9.23□□□□□ -0.93
CDC42SE2-202ENST00000395246 PPDPFLQ8WWR9 84 aa9.23□□□□□ -0.93
CDC42SE2-202ENST00000395246 HECTD4Q9Y4D8 3996 aa9.22□□□□□ -0.93
CDC42SE2-202ENST00000395246 FAM240AA0A1B0GVK7 77 aa9.22□□□□□ -0.93
CDC42SE2-202ENST00000395246 H3BQ85 93 aa9.22□□□□□ -0.93
CDC42SE2-202ENST00000395246 CBY1Q9Y3M2 126 aa9.22□□□□□ -0.93
CDC42SE2-202ENST00000395246 MEGF8Q7Z7M0 2845 aa9.22□□□□□ -0.93
CDC42SE2-202ENST00000395246 COL6A5A8TX70 2615 aa9.22□□□□□ -0.93
CDC42SE2-202ENST00000395246 PFN2P35080 140 aa9.22□□□□□ -0.93
CDC42SE2-202ENST00000395246 C9orf116Q5BN46 136 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE2-202ENST00000395246 DNAH8Q96JB1 4490 aa9.2□□□□□ -0.94
CDC42SE2-202ENST00000395246 ZNF561-AS1K7EIQ3 104 aa9.2□□□□□ -0.94
CDC42SE2-202ENST00000395246 SPRR1AP35321 89 aa9.2□□□□□ -0.94
CDC42SE2-202ENST00000395246 C9orf129Q5T035 196 aaKnown RBP9.2□□□□□ -0.94
CDC42SE2-202ENST00000395246 SYCNQ0VAF6 134 aa9.2□□□□□ -0.94
CDC42SE2-202ENST00000395246 Q6ZRP5 223 aa9.2□□□□□ -0.94
CDC42SE2-202ENST00000395246 LRCOL1A6NCL2 159 aa9.19□□□□□ -0.94
CDC42SE2-202ENST00000395246 KRTAP4-16G5E9R7 235 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE2-202ENST00000395246 CAMK2N2Q96S95 79 aa9.19□□□□□ -0.94
CDC42SE2-202ENST00000395246 CLEC2BQ92478 149 aa9.19□□□□□ -0.94
CDC42SE2-202ENST00000395246 KCNQ1DNQ9H478 68 aa9.19□□□□□ -0.94
CDC42SE2-202ENST00000395246 M0R378 163 aa9.18□□□□□ -0.94
CDC42SE2-202ENST00000395246 SCGB1C2P0DMR2 95 aa9.18□□□□□ -0.94
CDC42SE2-202ENST00000395246 TTC32Q5I0X7 151 aa9.18□□□□□ -0.94
CDC42SE2-202ENST00000395246 Q6ZR54 194 aa9.18□□□□□ -0.94
CDC42SE2-202ENST00000395246 KRTAP7-1Q8IUC3 87 aa9.18□□□□□ -0.94
CDC42SE2-202ENST00000395246 USP17L23D6RBM5 183 aa9.17□□□□□ -0.94
CDC42SE2-202ENST00000395246 C9JAW5 83 aa9.17□□□□□ -0.94
CDC42SE2-202ENST00000395246 Q1RN00 199 aa9.17□□□□□ -0.94
CDC42SE2-202ENST00000395246 ETDBQ3ZM63 59 aa9.16□□□□□ -0.94
CDC42SE2-202ENST00000395246 LINC00575Q6W349 94 aa9.16□□□□□ -0.94
CDC42SE2-202ENST00000395246 A0A0U1RRA0 63 aa9.16□□□□□ -0.94
CDC42SE2-202ENST00000395246 ELOF1P60002 83 aaKnown RBP9.16□□□□□ -0.94
CDC42SE2-202ENST00000395246 CASC10Q5T4H9 136 aa9.15□□□□□ -0.94
CDC42SE2-202ENST00000395246 IGKV2D-24A0A075B6R9 120 aa9.15□□□□□ -0.94
CDC42SE2-202ENST00000395246 Q8N814 137 aa9.15□□□□□ -0.94
CDC42SE2-202ENST00000395246 A0A087WYN8 130 aa9.15□□□□□ -0.95
CDC42SE2-202ENST00000395246 NBDYA0A0U1RRE5 68 aa9.14□□□□□ -0.95
CDC42SE2-202ENST00000395246 C14orf177Q52M58 125 aa9.14□□□□□ -0.95
CDC42SE2-202ENST00000395246 PKIGQ9Y2B9 76 aa9.14□□□□□ -0.95
CDC42SE2-202ENST00000395246 J3QR89 54 aa9.13□□□□□ -0.95
CDC42SE2-202ENST00000395246 CDIP1Q9H305 208 aa9.13□□□□□ -0.95
CDC42SE2-202ENST00000395246 C21orf62-AS1Q17RA5 79 aa9.12□□□□□ -0.95
CDC42SE2-202ENST00000395246 HIGD2BQ4VC39 106 aa9.12□□□□□ -0.95
CDC42SE2-202ENST00000395246 INAFM2P0DMQ5 153 aa9.11□□□□□ -0.95
CDC42SE2-202ENST00000395246 LOC107984640A0A0U1RRK4 108 aa9.11□□□□□ -0.95
CDC42SE2-202ENST00000395246 H7C2G1 150 aa9.11□□□□□ -0.95
CDC42SE2-202ENST00000395246 DNAH11Q96DT5 4516 aa9.1□□□□□ -0.95
CDC42SE2-202ENST00000395246 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
CDC42SE2-202ENST00000395246 PKD1P98161 4303 aa9.1□□□□□ -0.95
CDC42SE2-202ENST00000395246 TRAV23DV6A0A075B6W5 121 aa9.1□□□□□ -0.95
CDC42SE2-202ENST00000395246 C16orf90A8MZG2 172 aa9.1□□□□□ -0.95
CDC42SE2-202ENST00000395246 PRR3P79522 188 aaKnown RBP9.1□□□□□ -0.95
CDC42SE2-202ENST00000395246 LINC00526Q96FQ7 95 aa9.1□□□□□ -0.95
CDC42SE2-202ENST00000395246 PRYO14603 147 aa9.09□□□□□ -0.95
CDC42SE2-202ENST00000395246 ACYP1P07311 99 aa9.09□□□□□ -0.95
CDC42SE2-202ENST00000395246 IGLV1-50A0A075B6I6 118 aa9.09□□□□□ -0.95
CDC42SE2-202ENST00000395246 TRBV10-3A0A0K0K1G6 114 aa9.08□□□□□ -0.96
CDC42SE2-202ENST00000395246 FAT2Q9NYQ8 4349 aa9.08□□□□□ -0.96
CDC42SE2-202ENST00000395246 KMT2AQ03164 3969 aa9.08□□□□□ -0.96
CDC42SE2-202ENST00000395246 SCGB1A1P11684 91 aa9.08□□□□□ -0.96
CDC42SE2-202ENST00000395246 ZNF73O43830 326 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE2-202ENST00000395246 BAALC-AS2P0C853 105 aa9.06□□□□□ -0.96
CDC42SE2-202ENST00000395246 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE2-202ENST00000395246 SERTAD4-AS1Q5TG53 156 aa9.06□□□□□ -0.96
CDC42SE2-202ENST00000395246 C9orf163Q8N9P6 203 aa9.06□□□□□ -0.96
CDC42SE2-202ENST00000395246 NCR3O14931 201 aa9.06□□□□□ -0.96
CDC42SE2-202ENST00000395246 LOC110117498A0A087WWA1 95 aa9.05□□□□□ -0.96
CDC42SE2-202ENST00000395246 TMEM256-PLSCR3K7ERE1 68 aa9.05□□□□□ -0.96
CDC42SE2-202ENST00000395246 FBN3Q75N90 2809 aa9.05□□□□□ -0.96
CDC42SE2-202ENST00000395246 TEX49A0A1B0GTD5 131 aa9.05□□□□□ -0.96
CDC42SE2-202ENST00000395246 H0Y9J4 135 aa9.05□□□□□ -0.96
CDC42SE2-202ENST00000395246 C6orf99Q4VX62 202 aa9.05□□□□□ -0.96
CDC42SE2-202ENST00000395246 MTURNQ8N3F0 131 aa9.04□□□□□ -0.96
CDC42SE2-202ENST00000395246 DIRC1Q969H9 104 aa9.04□□□□□ -0.96
CDC42SE2-202ENST00000395246 ORMDL1Q9P0S3 153 aa9.04□□□□□ -0.96
CDC42SE2-202ENST00000395246 RPL18AQ02543 176 aaKnown RBP9.03□□□□□ -0.96
CDC42SE2-202ENST00000395246 C7orf33Q8WU49 177 aa9.03□□□□□ -0.96
CDC42SE2-202ENST00000395246 Q9HAA7 133 aa9.02□□□□□ -0.97
CDC42SE2-202ENST00000395246 IGLV5-48A0A075B6I7 105 aa9.02□□□□□ -0.97
CDC42SE2-202ENST00000395246 hADV29S1A0JD25 119 aa9.02□□□□□ -0.97
CDC42SE2-202ENST00000395246 S100A7L2Q5SY68 101 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms