RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 ARL17AQ8IVW1 177 aa5.47□□□□□ -1.53
HERC4-203ENST00000395185 Q8N1X5 172 aa5.47□□□□□ -1.53
HERC4-203ENST00000395185 DPH3Q96FX2 82 aa5.47□□□□□ -1.53
HERC4-203ENST00000395185 LINC00587B1AMM8 73 aa5.46□□□□□ -1.54
HERC4-203ENST00000395185 TLX1NBP0CAT3 122 aa5.46□□□□□ -1.54
HERC4-203ENST00000395185 TAL2Q16559 108 aa5.46□□□□□ -1.54
HERC4-203ENST00000395185 Q6ZVH6 145 aa5.46□□□□□ -1.54
HERC4-203ENST00000395185 ERG28Q9UKR5 140 aa5.46□□□□□ -1.54
HERC4-203ENST00000395185 EPM2AB3EWF7 344 aa5.45□□□□□ -1.54
HERC4-203ENST00000395185 XGP55808 180 aa5.45□□□□□ -1.54
HERC4-203ENST00000395185 CAMK2N2Q96S95 79 aa5.45□□□□□ -1.54
HERC4-203ENST00000395185 SPANXDQ9BXN6 97 aa5.45□□□□□ -1.54
HERC4-203ENST00000395185 SPANXCQ9NY87 97 aa5.45□□□□□ -1.54
HERC4-203ENST00000395185 LRP1BQ9NZR2 4599 aa5.45□□□□□ -1.54
HERC4-203ENST00000395185 SMIM13P0DJ93 91 aa5.44□□□□□ -1.54
HERC4-203ENST00000395185 CIRBPQ14011 172 aaKnown RBP5.44□□□□□ -1.54
HERC4-203ENST00000395185 C9orf116Q5BN46 136 aaPredicted RBP5.44□□□□□ -1.54
HERC4-203ENST00000395185 SCGB1D4Q6XE38 83 aa5.44□□□□□ -1.54
HERC4-203ENST00000395185 C9orf163Q8N9P6 203 aa5.44□□□□□ -1.54
HERC4-203ENST00000395185 KIAA1109Q2LD37 5005 aa5.43□□□□□ -1.54
HERC4-203ENST00000395185 TMEM238C9JI98 176 aa5.43□□□□□ -1.54
HERC4-203ENST00000395185 IFITM1P13164 125 aa5.43□□□□□ -1.54
HERC4-203ENST00000395185 HNRNPA3P51991 378 aaKnown RBP5.43□□□□□ -1.54
HERC4-203ENST00000395185 CTAG1AP78358 180 aa5.43□□□□□ -1.54
HERC4-203ENST00000395185 SOSTDC1Q6X4U4 206 aa5.43□□□□□ -1.54
HERC4-203ENST00000395185 SDIM1Q6ZPB5 146 aa5.43□□□□□ -1.54
HERC4-203ENST00000395185 CARD19Q96LW7 228 aa5.43□□□□□ -1.54
HERC4-203ENST00000395185 PKIGQ9Y2B9 76 aa5.43□□□□□ -1.54
HERC4-203ENST00000395185 NDUFC2-KCTD14E9PQ53 114 aa5.42□□□□□ -1.54
HERC4-203ENST00000395185 SMR3BP02814 79 aaPredicted RBP5.42□□□□□ -1.54
HERC4-203ENST00000395185 HSD52Q0P140 79 aa5.42□□□□□ -1.54
HERC4-203ENST00000395185 LINC01620Q4KN68 170 aa5.42□□□□□ -1.54
HERC4-203ENST00000395185 MIR7-3HGQ8N6C7 128 aa5.42□□□□□ -1.54
HERC4-203ENST00000395185 LINC00308Q8TCZ7 52 aa5.42□□□□□ -1.54
HERC4-203ENST00000395185 FAM30AQ9NZY2 134 aa5.42□□□□□ -1.54
HERC4-203ENST00000395185 DNAH5Q8TE73 4624 aa5.41□□□□□ -1.54
HERC4-203ENST00000395185 PLA2G1BP04054 148 aaKnown RBP5.41□□□□□ -1.54
HERC4-203ENST00000395185 LINC00158P58513 81 aa5.41□□□□□ -1.54
HERC4-203ENST00000395185 MEIG1Q5JSS6 88 aa5.41□□□□□ -1.54
HERC4-203ENST00000395185 BVES-AS1Q5T3Y7 98 aa5.41□□□□□ -1.54
HERC4-203ENST00000395185 Q6ZRP5 223 aa5.41□□□□□ -1.54
HERC4-203ENST00000395185 MUSTN1Q8IVN3 82 aa5.41□□□□□ -1.54
HERC4-203ENST00000395185 CEND1Q8N111 149 aa5.41□□□□□ -1.54
HERC4-203ENST00000395185 SND1-IT1Q9HBX3 110 aa5.41□□□□□ -1.54
HERC4-203ENST00000395185 A0A1B0GWB2 263 aa5.4□□□□□ -1.54
HERC4-203ENST00000395185 PFN2P35080 140 aa5.4□□□□□ -1.54
HERC4-203ENST00000395185 SRSF9Q13242 221 aaKnown RBP eCLIP5.4□□□□□ -1.542e-8■■■□□ 15.1
HERC4-203ENST00000395185 Q6ZSA8 131 aa5.4□□□□□ -1.54
HERC4-203ENST00000395185 DAND5Q8N907 189 aa5.4□□□□□ -1.54
HERC4-203ENST00000395185 HIST1H4GQ99525 98 aa5.4□□□□□ -1.54
HERC4-203ENST00000395185 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
HERC4-203ENST00000395185 A0A0U1RRA0 63 aa5.39□□□□□ -1.55
HERC4-203ENST00000395185 LOC107984640A0A0U1RRK4 108 aa5.39□□□□□ -1.55
HERC4-203ENST00000395185 FXYD2P54710 66 aa5.39□□□□□ -1.55
HERC4-203ENST00000395185 Q5VSD8 79 aa5.39□□□□□ -1.55
HERC4-203ENST00000395185 Q8NDZ9 215 aa5.39□□□□□ -1.55
HERC4-203ENST00000395185 PLA2G2DQ9UNK4 145 aa5.39□□□□□ -1.55
HERC4-203ENST00000395185 HSPG2P98160 4391 aa5.39□□□□□ -1.55
HERC4-203ENST00000395185 A4D1N5 150 aa5.38□□□□□ -1.55
HERC4-203ENST00000395185 PCP4L1A6NKN8 68 aa5.38□□□□□ -1.55
HERC4-203ENST00000395185 NDUFC2O95298 119 aa5.38□□□□□ -1.55
HERC4-203ENST00000395185 INAFM2P0DMQ5 153 aa5.38□□□□□ -1.55
HERC4-203ENST00000395185 HAMPP81172 84 aa5.38□□□□□ -1.55
HERC4-203ENST00000395185 C9orf129Q5T035 196 aaKnown RBP5.38□□□□□ -1.55
HERC4-203ENST00000395185 SCXQ7RTU7 201 aa5.38□□□□□ -1.55
HERC4-203ENST00000395185 KRTAP7-1Q8IUC3 87 aa5.38□□□□□ -1.55
HERC4-203ENST00000395185 SNHG12Q9BXW3 62 aa5.38□□□□□ -1.55
HERC4-203ENST00000395185 LINC00474Q9P2X8 69 aa5.38□□□□□ -1.55
HERC4-203ENST00000395185 IGLV5-37A0A075B6J1 123 aa5.37□□□□□ -1.55
HERC4-203ENST00000395185 IGKV2-28A0A075B6P5 120 aa5.37□□□□□ -1.55
HERC4-203ENST00000395185 M0R143 59 aa5.37□□□□□ -1.55
HERC4-203ENST00000395185 IGKV2D-28P01615 120 aa5.37□□□□□ -1.55
HERC4-203ENST00000395185 RPL24P83731 157 aaKnown RBP5.37□□□□□ -1.55
HERC4-203ENST00000395185 CIRBP-AS1Q8TBR5 109 aa5.37□□□□□ -1.55
HERC4-203ENST00000395185 COPS9Q8WXC6 57 aa5.37□□□□□ -1.55
HERC4-203ENST00000395185 KRTAP4-5Q9BYR2 181 aa5.37□□□□□ -1.55
HERC4-203ENST00000395185 APOBP04114 4563 aaKnown RBP5.36□□□□□ -1.55
HERC4-203ENST00000395185 CFC1BP0CG36 223 aa5.36□□□□□ -1.55
HERC4-203ENST00000395185 CFC1P0CG37 223 aa5.36□□□□□ -1.55
HERC4-203ENST00000395185 VPREB1P12018 145 aa5.36□□□□□ -1.55
HERC4-203ENST00000395185 HINT1P49773 126 aaPredicted RBP5.36□□□□□ -1.55
HERC4-203ENST00000395185 XAGE1AQ9HD64 81 aa5.36□□□□□ -1.55
HERC4-203ENST00000395185 A0A096LNI7 61 aa5.35□□□□□ -1.55
HERC4-203ENST00000395185 A0A0B4J2C4 111 aa5.35□□□□□ -1.55
HERC4-203ENST00000395185 TRBV10-2A0A0K0K1G8 114 aa5.35□□□□□ -1.55
HERC4-203ENST00000395185 GAGE2EQ4V326 116 aa5.35□□□□□ -1.55
HERC4-203ENST00000395185 GAGE2DQ9UEU5 116 aa5.35□□□□□ -1.55
HERC4-203ENST00000395185 PANO1I0J062 215 aa5.34□□□□□ -1.55
HERC4-203ENST00000395185 GAGE2BQ13066 116 aa5.34□□□□□ -1.55
HERC4-203ENST00000395185 IGKV2-24A0A0C4DH68 120 aa5.33□□□□□ -1.56
HERC4-203ENST00000395185 A0A1W2PNN7 141 aa5.33□□□□□ -1.56
HERC4-203ENST00000395185 NPC2P61916 151 aa5.33□□□□□ -1.56
HERC4-203ENST00000395185 PRR3P79522 188 aaKnown RBP5.33□□□□□ -1.56
HERC4-203ENST00000395185 SERTAD4-AS1Q5TG53 156 aa5.33□□□□□ -1.56
HERC4-203ENST00000395185 LINC00337Q8N6G1 96 aa5.33□□□□□ -1.56
HERC4-203ENST00000395185 SPACA4Q8TDM5 124 aa5.33□□□□□ -1.56
HERC4-203ENST00000395185 C7orf33Q8WU49 177 aa5.33□□□□□ -1.56
HERC4-203ENST00000395185 A0A087WYN8 130 aa5.32□□□□□ -1.56
HERC4-203ENST00000395185 IGLV6-57P01721 117 aa5.32□□□□□ -1.56
HERC4-203ENST00000395185 CHTF8P0CG12 524 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms