RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 ITPR3Q14573 2671 aa6.84□□□□□ -1.31
UBE2D3-208ENST00000394803 TRBV7-6A0A0J9YX20 115 aa6.84□□□□□ -1.32
UBE2D3-208ENST00000394803 DIRC1Q969H9 104 aa6.84□□□□□ -1.32
UBE2D3-208ENST00000394803 NOTCH3Q9UM47 2321 aa6.83□□□□□ -1.32
UBE2D3-208ENST00000394803 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.83□□□□□ -1.32
UBE2D3-208ENST00000394803 PRR34Q9NV39 138 aa6.83□□□□□ -1.32
UBE2D3-208ENST00000394803 ENHOQ6UWT2 76 aa6.82□□□□□ -1.32
UBE2D3-208ENST00000394803 OTOGQ6ZRI0 2925 aa6.82□□□□□ -1.32
UBE2D3-208ENST00000394803 CYSRT1A8MQ03 144 aa6.82□□□□□ -1.32
UBE2D3-208ENST00000394803 FLNAP21333 2647 aaKnown RBP6.82□□□□□ -1.32
UBE2D3-208ENST00000394803 CXCL6P80162 114 aa6.82□□□□□ -1.32
UBE2D3-208ENST00000394803 DEFB135Q30KP9 77 aa6.82□□□□□ -1.32
UBE2D3-208ENST00000394803 C9orf116Q5BN46 136 aaPredicted RBP6.82□□□□□ -1.32
UBE2D3-208ENST00000394803 TRAV23DV6A0A075B6W5 121 aa6.81□□□□□ -1.32
UBE2D3-208ENST00000394803 UNQ6190/PRO20217Q6UXQ8 127 aa6.81□□□□□ -1.32
UBE2D3-208ENST00000394803 TLN2Q9Y4G6 2542 aa6.81□□□□□ -1.32
UBE2D3-208ENST00000394803 C2CD3Q4AC94 2353 aa6.81□□□□□ -1.32
UBE2D3-208ENST00000394803 TRAV7A0A075B6U4 112 aa6.8□□□□□ -1.32
UBE2D3-208ENST00000394803 LOC107984640A0A0U1RRK4 108 aa6.8□□□□□ -1.32
UBE2D3-208ENST00000394803 Q6ZQY7 126 aa6.8□□□□□ -1.32
UBE2D3-208ENST00000394803 DPH3Q96FX2 82 aa6.8□□□□□ -1.32
UBE2D3-208ENST00000394803 ACANP16112 2415 aa6.79□□□□□ -1.32
UBE2D3-208ENST00000394803 CUBNO60494 3623 aa6.79□□□□□ -1.32
UBE2D3-208ENST00000394803 F8WDY8 70 aa6.79□□□□□ -1.32
UBE2D3-208ENST00000394803 COX7BP24311 80 aa6.79□□□□□ -1.32
UBE2D3-208ENST00000394803 Q8NAQ8 132 aa6.79□□□□□ -1.32
UBE2D3-208ENST00000394803 C10orf25Q5T742 122 aa6.78□□□□□ -1.32
UBE2D3-208ENST00000394803 FAM19A5Q7Z5A7 132 aaPredicted RBP6.78□□□□□ -1.32
UBE2D3-208ENST00000394803 FAM19A1Q7Z5A9 133 aa6.78□□□□□ -1.32
UBE2D3-208ENST00000394803 KLK12Q9UKR0 248 aa6.78□□□□□ -1.32
UBE2D3-208ENST00000394803 ZNF73O43830 326 aaPredicted RBP6.78□□□□□ -1.32
UBE2D3-208ENST00000394803 LINC01547P58512 204 aaPredicted RBP6.78□□□□□ -1.32
UBE2D3-208ENST00000394803 KRTAP10-3P60369 221 aa6.78□□□□□ -1.32
UBE2D3-208ENST00000394803 Q6ZVQ6 151 aa6.78□□□□□ -1.32
UBE2D3-208ENST00000394803 H3BNG1 76 aa6.77□□□□□ -1.33
UBE2D3-208ENST00000394803 HAMPP81172 84 aa6.77□□□□□ -1.33
UBE2D3-208ENST00000394803 EGFEM1PQ0D2K5 195 aa6.77□□□□□ -1.33
UBE2D3-208ENST00000394803 C5orf47Q569G3 176 aa6.77□□□□□ -1.33
UBE2D3-208ENST00000394803 Q8NDZ9 215 aa6.77□□□□□ -1.33
UBE2D3-208ENST00000394803 ELOF1P60002 83 aaKnown RBP6.77□□□□□ -1.33
UBE2D3-208ENST00000394803 M0R378 163 aa6.76□□□□□ -1.33
UBE2D3-208ENST00000394803 DEFB4AO15263 64 aa6.76□□□□□ -1.33
UBE2D3-208ENST00000394803 HTN3P15516 51 aa6.76□□□□□ -1.33
UBE2D3-208ENST00000394803 Q8N3U1 123 aa6.76□□□□□ -1.33
UBE2D3-208ENST00000394803 WFDC9Q8NEX5 89 aa6.76□□□□□ -1.33
UBE2D3-208ENST00000394803 C6orf48Q9UBA6 75 aa6.76□□□□□ -1.33
UBE2D3-208ENST00000394803 CELA1Q9UNI1 258 aa6.76□□□□□ -1.33
UBE2D3-208ENST00000394803 JMJD1CQ15652 2540 aa6.75□□□□□ -1.33
UBE2D3-208ENST00000394803 TRBV7-4A0A0J9YYF1 115 aa6.75□□□□□ -1.33
UBE2D3-208ENST00000394803 CAMK2N2Q96S95 79 aa6.75□□□□□ -1.33
UBE2D3-208ENST00000394803 SMR3AQ99954 134 aa6.75□□□□□ -1.33
UBE2D3-208ENST00000394803 NDUFC1O43677 76 aa6.74□□□□□ -1.33
UBE2D3-208ENST00000394803 C20orf197Q8N268 126 aa6.74□□□□□ -1.33
UBE2D3-208ENST00000394803 SONP18583 2426 aaKnown RBP6.74□□□□□ -1.33
UBE2D3-208ENST00000394803 FAM236DA0A1B0GTK5 79 aa6.74□□□□□ -1.33
UBE2D3-208ENST00000394803 FAM236CP0DP71 79 aa6.74□□□□□ -1.33
UBE2D3-208ENST00000394803 CYSTM1Q9H1C7 97 aa6.74□□□□□ -1.33
UBE2D3-208ENST00000394803 KLKP1Q107X0 134 aa6.73□□□□□ -1.33
UBE2D3-208ENST00000394803 SPATA3Q8NHX4 192 aa6.73□□□□□ -1.33
UBE2D3-208ENST00000394803 VPREB1P12018 145 aa6.73□□□□□ -1.33
UBE2D3-208ENST00000394803 ATP5EP56381 51 aaPredicted RBP6.72□□□□□ -1.33
UBE2D3-208ENST00000394803 HIVEP1P15822 2718 aa6.72□□□□□ -1.33
UBE2D3-208ENST00000394803 WIPF1O43516 503 aa6.72□□□□□ -1.33
UBE2D3-208ENST00000394803 XAGE1AQ9HD64 81 aa6.72□□□□□ -1.33
UBE2D3-208ENST00000394803 SERP1Q9Y6X1 66 aa6.71□□□□□ -1.34
UBE2D3-208ENST00000394803 A0A1B0GW54 56 aa6.7□□□□□ -1.34
UBE2D3-208ENST00000394803 ERC2-IT1O76042 136 aa6.69□□□□□ -1.34
UBE2D3-208ENST00000394803 LINC00528Q8N1L1 170 aa6.69□□□□□ -1.34
UBE2D3-208ENST00000394803 C1orf43Q9BWL3 253 aa6.69□□□□□ -1.34
UBE2D3-208ENST00000394803 MTORP42345 2549 aa6.68□□□□□ -1.34
UBE2D3-208ENST00000394803 ANK3Q12955 4377 aaKnown RBP6.68□□□□□ -1.34
UBE2D3-208ENST00000394803 H7BZZ5 65 aa6.68□□□□□ -1.34
UBE2D3-208ENST00000394803 M0R2N4 97 aa6.68□□□□□ -1.34
UBE2D3-208ENST00000394803 KPRPQ5T749 579 aaPredicted RBP6.68□□□□□ -1.34
UBE2D3-208ENST00000394803 HIGD2BQ4VC39 106 aa6.67□□□□□ -1.34
UBE2D3-208ENST00000394803 Q6ZRU5 148 aa6.67□□□□□ -1.34
UBE2D3-208ENST00000394803 NKAPP1Q8N9T2 125 aa6.67□□□□□ -1.34
UBE2D3-208ENST00000394803 NF1P21359 2839 aa6.67□□□□□ -1.34
UBE2D3-208ENST00000394803 MAST4O15021 2626 aa6.66□□□□□ -1.34
UBE2D3-208ENST00000394803 TEP1Q99973 2627 aaKnown RBP6.66□□□□□ -1.34
UBE2D3-208ENST00000394803 NREPQ16612 68 aa6.66□□□□□ -1.34
UBE2D3-208ENST00000394803 KRTAP26-1Q6PEX3 210 aa6.66□□□□□ -1.34
UBE2D3-208ENST00000394803 WFDC10BQ8IUB3 73 aa6.66□□□□□ -1.34
UBE2D3-208ENST00000394803 TRAV10A0A0B4J240 114 aa6.65□□□□□ -1.34
UBE2D3-208ENST00000394803 LINC01556Q5JQF7 62 aa6.65□□□□□ -1.34
UBE2D3-208ENST00000394803 C15orf56Q8N910 161 aa6.65□□□□□ -1.34
UBE2D3-208ENST00000394803 DHRS4-AS1Q9P1J3 65 aa6.65□□□□□ -1.34
UBE2D3-208ENST00000394803 F8P00451 2351 aa6.65□□□□□ -1.34
UBE2D3-208ENST00000394803 SYCNQ0VAF6 134 aa6.65□□□□□ -1.35
UBE2D3-208ENST00000394803 EPM2AB3EWF7 344 aa6.64□□□□□ -1.35
UBE2D3-208ENST00000394803 KCNQ1DNQ9H478 68 aa6.64□□□□□ -1.35
UBE2D3-208ENST00000394803 HIVEP2P31629 2446 aa6.64□□□□□ -1.35
UBE2D3-208ENST00000394803 FN1P02751 2386 aaKnown RBP6.64□□□□□ -1.35
UBE2D3-208ENST00000394803 BPY2O14599 106 aa6.64□□□□□ -1.35
UBE2D3-208ENST00000394803 PLA2G2DQ9UNK4 145 aa6.64□□□□□ -1.35
UBE2D3-208ENST00000394803 NSD1Q96L73 2696 aaPredicted RBP6.63□□□□□ -1.35
UBE2D3-208ENST00000394803 FUSP35637 526 aaKnown RBP eCLIP6.63□□□□□ -1.35
UBE2D3-208ENST00000394803 SETD2Q9BYW2 2564 aaPredicted RBP6.63□□□□□ -1.35
UBE2D3-208ENST00000394803 INAFM1C9JVW0 142 aa6.62□□□□□ -1.35
UBE2D3-208ENST00000394803 OXTP01178 125 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms