RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 PRKDCP78527 4128 aaKnown RBP14.63□□□□□ -0.07
HMGA2-203ENST00000393578 SYCNQ0VAF6 134 aa14.62□□□□□ -0.07
HMGA2-203ENST00000393578 Q8NDZ9 215 aa14.62□□□□□ -0.07
HMGA2-203ENST00000393578 TRBV10-2A0A0K0K1G8 114 aa14.61□□□□□ -0.07
HMGA2-203ENST00000393578 DNAH1Q9P2D7 4330 aa14.6□□□□□ -0.07
HMGA2-203ENST00000393578 USP17L23D6RBM5 183 aa14.6□□□□□ -0.07
HMGA2-203ENST00000393578 NDUFC2-KCTD14E9PQ53 114 aa14.6□□□□□ -0.07
HMGA2-203ENST00000393578 LINC01600Q96MT4 127 aa14.6□□□□□ -0.07
HMGA2-203ENST00000393578 TMEM126AQ9H061 195 aa14.6□□□□□ -0.07
HMGA2-203ENST00000393578 CASC10Q5T4H9 136 aa14.6□□□□□ -0.07
HMGA2-203ENST00000393578 ANKRD29Q8N6D5 301 aa14.6□□□□□ -0.07
HMGA2-203ENST00000393578 TEN1Q86WV5 123 aa14.58□□□□□ -0.07
HMGA2-203ENST00000393578 XAGE1AQ9HD64 81 aa14.58□□□□□ -0.07
HMGA2-203ENST00000393578 CSMD3Q7Z407 3707 aa14.58□□□□□ -0.08
HMGA2-203ENST00000393578 NCR3O14931 201 aa14.58□□□□□ -0.08
HMGA2-203ENST00000393578 KRTAP1-5Q9BYS1 174 aa14.58□□□□□ -0.08
HMGA2-203ENST00000393578 H0YGX0 51 aa14.57□□□□□ -0.08
HMGA2-203ENST00000393578 TRACP01848 142 aa14.56□□□□□ -0.08
HMGA2-203ENST00000393578 RNF151Q2KHN1 245 aa14.55□□□□□ -0.08
HMGA2-203ENST00000393578 CARD19Q96LW7 228 aa14.55□□□□□ -0.08
HMGA2-203ENST00000393578 FAM218AQ96MZ4 157 aa14.55□□□□□ -0.08
HMGA2-203ENST00000393578 H3BT86 120 aa14.54□□□□□ -0.08
HMGA2-203ENST00000393578 S100A7L2Q5SY68 101 aa14.54□□□□□ -0.08
HMGA2-203ENST00000393578 LYSTQ99698 3801 aa14.54□□□□□ -0.08
HMGA2-203ENST00000393578 J3QR89 54 aa14.52□□□□□ -0.09
HMGA2-203ENST00000393578 SLPIP03973 132 aa14.52□□□□□ -0.09
HMGA2-203ENST00000393578 Q6ZRP5 223 aa14.52□□□□□ -0.09
HMGA2-203ENST00000393578 IGLV6-57P01721 117 aa14.51□□□□□ -0.09
HMGA2-203ENST00000393578 RPL18AQ02543 176 aaKnown RBP14.51□□□□□ -0.09
HMGA2-203ENST00000393578 GAGE2EQ4V326 116 aa14.51□□□□□ -0.09
HMGA2-203ENST00000393578 PPDPFLQ8WWR9 84 aa14.51□□□□□ -0.09
HMGA2-203ENST00000393578 GAGE2DQ9UEU5 116 aa14.51□□□□□ -0.09
HMGA2-203ENST00000393578 DNAH7Q8WXX0 4024 aa14.5□□□□□ -0.09
HMGA2-203ENST00000393578 TLX1NBP0CAT3 122 aa14.5□□□□□ -0.09
HMGA2-203ENST00000393578 LECT2O14960 151 aa14.49□□□□□ -0.09
HMGA2-203ENST00000393578 TENM2Q9NT68 2774 aa14.49□□□□□ -0.09
HMGA2-203ENST00000393578 VPREB1P12018 145 aa14.48□□□□□ -0.09
HMGA2-203ENST00000393578 A0A087WYN8 130 aa14.47□□□□□ -0.09
HMGA2-203ENST00000393578 TTC32Q5I0X7 151 aa14.47□□□□□ -0.09
HMGA2-203ENST00000393578 PLECQ15149 4684 aaKnown RBP14.46□□□□□ -0.09
HMGA2-203ENST00000393578 PSCAO43653 123 aa14.45□□□□□ -0.1
HMGA2-203ENST00000393578 NBDYA0A0U1RRE5 68 aa14.44□□□□□ -0.1
HMGA2-203ENST00000393578 DNAL4O96015 105 aa14.44□□□□□ -0.1
HMGA2-203ENST00000393578 C9orf129Q5T035 196 aaKnown RBP14.44□□□□□ -0.1
HMGA2-203ENST00000393578 TRBV10-3A0A0K0K1G6 114 aa14.43□□□□□ -0.1
HMGA2-203ENST00000393578 C6orf99Q4VX62 202 aa14.43□□□□□ -0.1
HMGA2-203ENST00000393578 M0R378 163 aa14.43□□□□□ -0.1
HMGA2-203ENST00000393578 BAALC-AS2P0C853 105 aa14.42□□□□□ -0.1
HMGA2-203ENST00000393578 VPS25Q9BRG1 176 aa14.42□□□□□ -0.1
HMGA2-203ENST00000393578 A0A1B0GX51 115 aa14.41□□□□□ -0.1
HMGA2-203ENST00000393578 STARD9Q9P2P6 4700 aa14.41□□□□□ -0.1
HMGA2-203ENST00000393578 TEX49A0A1B0GTD5 131 aa14.4□□□□□ -0.1
HMGA2-203ENST00000393578 TRAV23DV6A0A075B6W5 121 aa14.39□□□□□ -0.11
HMGA2-203ENST00000393578 PLA2G2DQ9UNK4 145 aa14.38□□□□□ -0.11
HMGA2-203ENST00000393578 LOC107984640A0A0U1RRK4 108 aa14.37□□□□□ -0.11
HMGA2-203ENST00000393578 CNBPP62633 177 aaKnown RBP14.37□□□□□ -0.11
HMGA2-203ENST00000393578 C14orf177Q52M58 125 aa14.37□□□□□ -0.11
HMGA2-203ENST00000393578 Q8N814 137 aa14.36□□□□□ -0.11
HMGA2-203ENST00000393578 CBY1Q9Y3M2 126 aa14.36□□□□□ -0.11
HMGA2-203ENST00000393578 FBN3Q75N90 2809 aa14.36□□□□□ -0.11
HMGA2-203ENST00000393578 SNCGO76070 127 aa14.35□□□□□ -0.11
HMGA2-203ENST00000393578 NKAPP1Q8N9T2 125 aa14.34□□□□□ -0.11
HMGA2-203ENST00000393578 DIRC1Q969H9 104 aa14.34□□□□□ -0.11
HMGA2-203ENST00000393578 LINC00167Q96N53 147 aa14.34□□□□□ -0.11
HMGA2-203ENST00000393578 ZNF73O43830 326 aaPredicted RBP14.34□□□□□ -0.11
HMGA2-203ENST00000393578 SERTAD4-AS1Q5TG53 156 aa14.34□□□□□ -0.11
HMGA2-203ENST00000393578 LINC00575Q6W349 94 aa14.34□□□□□ -0.11
HMGA2-203ENST00000393578 C22orf24Q9Y442 160 aa14.34□□□□□ -0.11
HMGA2-203ENST00000393578 GAGE2BQ13066 116 aa14.33□□□□□ -0.12
HMGA2-203ENST00000393578 DNAH10Q8IVF4 4471 aa14.32□□□□□ -0.12
HMGA2-203ENST00000393578 TRBV7-6A0A0J9YX20 115 aa14.31□□□□□ -0.12
HMGA2-203ENST00000393578 Q6ZRN7 208 aaPredicted RBP14.31□□□□□ -0.12
HMGA2-203ENST00000393578 ORMDL1Q9P0S3 153 aa14.31□□□□□ -0.12
HMGA2-203ENST00000393578 IGLV5-37A0A075B6J1 123 aa14.31□□□□□ -0.12
HMGA2-203ENST00000393578 LRCOL1A6NCL2 159 aa14.29□□□□□ -0.12
HMGA2-203ENST00000393578 VPS13DQ5THJ4 4388 aa14.29□□□□□ -0.12
HMGA2-203ENST00000393578 hADV29S1A0JD25 119 aa14.28□□□□□ -0.12
HMGA2-203ENST00000393578 C7orf33Q8WU49 177 aa14.28□□□□□ -0.12
HMGA2-203ENST00000393578 FAM168BA1KXE4 195 aa14.27□□□□□ -0.13
HMGA2-203ENST00000393578 M0R2N4 97 aa14.26□□□□□ -0.13
HMGA2-203ENST00000393578 COX7BP24311 80 aa14.26□□□□□ -0.13
HMGA2-203ENST00000393578 ELOF1P60002 83 aaKnown RBP14.26□□□□□ -0.13
HMGA2-203ENST00000393578 KCNQ1DNQ9H478 68 aa14.26□□□□□ -0.13
HMGA2-203ENST00000393578 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.25□□□□□ -0.13
HMGA2-203ENST00000393578 C16orf90A8MZG2 172 aa14.24□□□□□ -0.13
HMGA2-203ENST00000393578 KRTAP7-1Q8IUC3 87 aa14.24□□□□□ -0.13
HMGA2-203ENST00000393578 TMEM256-PLSCR3K7ERE1 68 aa14.23□□□□□ -0.13
HMGA2-203ENST00000393578 INAFM2P0DMQ5 153 aa14.22□□□□□ -0.13
HMGA2-203ENST00000393578 A0A096LNI7 61 aa14.21□□□□□ -0.13
HMGA2-203ENST00000393578 Q6ZR54 194 aa14.21□□□□□ -0.13
HMGA2-203ENST00000393578 CDIP1Q9H305 208 aa14.21□□□□□ -0.13
HMGA2-203ENST00000393578 FAM19A5Q7Z5A7 132 aaPredicted RBP14.2□□□□□ -0.14
HMGA2-203ENST00000393578 OBSCN-AS1Q96MR7 158 aa14.2□□□□□ -0.14
HMGA2-203ENST00000393578 IGLV1-50A0A075B6I6 118 aa14.2□□□□□ -0.14
HMGA2-203ENST00000393578 WWC2-AS2Q96NR7 200 aa14.2□□□□□ -0.14
HMGA2-203ENST00000393578 MRPL55Q7Z7F7 128 aaKnown RBP14.19□□□□□ -0.14
HMGA2-203ENST00000393578 C9orf163Q8N9P6 203 aa14.19□□□□□ -0.14
HMGA2-203ENST00000393578 LINC00528Q8N1L1 170 aa14.18□□□□□ -0.14
HMGA2-203ENST00000393578 FAM240AA0A1B0GVK7 77 aa14.18□□□□□ -0.14
HMGA2-203ENST00000393578 PKIGQ9Y2B9 76 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms