RNA–Protein interactions for RNA: ENST00000392919.4

GNPTAB-202, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best) BASIC

Gene GNPTAB, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-202ENST00000392919 S100A2P29034 98 aa16.78■□□□□ 0.28
GNPTAB-202ENST00000392919 KRTAP11-1Q8IUC1 163 aa16.78■□□□□ 0.28
GNPTAB-202ENST00000392919 PLA2G2DQ9UNK4 145 aa16.78■□□□□ 0.28
GNPTAB-202ENST00000392919 C22orf24Q9Y442 160 aa16.78■□□□□ 0.28
GNPTAB-202ENST00000392919 LINC00158P58513 81 aa16.77■□□□□ 0.28
GNPTAB-202ENST00000392919 SNRPEP62304 92 aaKnown RBP16.77■□□□□ 0.28
GNPTAB-202ENST00000392919 A0A0U1RRA0 63 aa16.76■□□□□ 0.27
GNPTAB-202ENST00000392919 SMIM13P0DJ93 91 aa16.76■□□□□ 0.27
GNPTAB-202ENST00000392919 HMCN2Q8NDA2 5059 aa16.75■□□□□ 0.27
GNPTAB-202ENST00000392919 C20orf202A1L168 122 aa16.75■□□□□ 0.27
GNPTAB-202ENST00000392919 LGALS3P17931 250 aaKnown RBP16.75■□□□□ 0.27
GNPTAB-202ENST00000392919 MEIG1Q5JSS6 88 aa16.75■□□□□ 0.27
GNPTAB-202ENST00000392919 PSORS1C2Q9UIG4 136 aa16.75■□□□□ 0.27
GNPTAB-202ENST00000392919 NMUP48645 174 aa16.74■□□□□ 0.27
GNPTAB-202ENST00000392919 IGLV5-37A0A075B6J1 123 aa16.72■□□□□ 0.27
GNPTAB-202ENST00000392919 C5orf52A6NGY3 159 aa16.72■□□□□ 0.27
GNPTAB-202ENST00000392919 TP73-AS1Q9UF72 201 aa16.72■□□□□ 0.27
GNPTAB-202ENST00000392919 LINC00587B1AMM8 73 aa16.7■□□□□ 0.26
GNPTAB-202ENST00000392919 UBE2BP63146 152 aa16.7■□□□□ 0.26
GNPTAB-202ENST00000392919 LBHQ53QV2 105 aaPredicted RBP16.7■□□□□ 0.26
GNPTAB-202ENST00000392919 IGKV2D-26A0A0A0MRZ7 120 aa16.69■□□□□ 0.26
GNPTAB-202ENST00000392919 MRPL55Q7Z7F7 128 aaKnown RBP16.69■□□□□ 0.26
GNPTAB-202ENST00000392919 MIR7-3HGQ8N6C7 128 aa16.69■□□□□ 0.26
GNPTAB-202ENST00000392919 Q8NDZ9 215 aa16.69■□□□□ 0.26
GNPTAB-202ENST00000392919 VPREB1P12018 145 aa16.68■□□□□ 0.26
GNPTAB-202ENST00000392919 ATOH7Q8N100 152 aa16.68■□□□□ 0.26
GNPTAB-202ENST00000392919 C1orf137Q5JT78 98 aa16.67■□□□□ 0.26
GNPTAB-202ENST00000392919 LINC00167Q96N53 147 aa16.66■□□□□ 0.26
GNPTAB-202ENST00000392919 NKAPP1Q8N9T2 125 aa16.65■□□□□ 0.26
GNPTAB-202ENST00000392919 AKR1D1P51857 326 aa16.64■□□□□ 0.25
GNPTAB-202ENST00000392919 A0A0J9YXY3 114 aa16.63■□□□□ 0.25
GNPTAB-202ENST00000392919 RPL24P83731 157 aaKnown RBP16.63■□□□□ 0.25
GNPTAB-202ENST00000392919 SRSF9Q13242 221 aaKnown RBP eCLIP16.63■□□□□ 0.25
GNPTAB-202ENST00000392919 ANKRD39Q53RE8 183 aa16.63■□□□□ 0.25
GNPTAB-202ENST00000392919 GAGE10A6NGK3 116 aa16.62■□□□□ 0.25
GNPTAB-202ENST00000392919 DAND5Q8N907 189 aa16.62■□□□□ 0.25
GNPTAB-202ENST00000392919 TTTY13Q9BZ97 58 aa16.62■□□□□ 0.25
GNPTAB-202ENST00000392919 LINC01600Q96MT4 127 aa16.61■□□□□ 0.25
GNPTAB-202ENST00000392919 RPL37AP8A6NKH3 93 aa16.6■□□□□ 0.25
GNPTAB-202ENST00000392919 SPINK6Q6UWN8 80 aa16.59■□□□□ 0.25
GNPTAB-202ENST00000392919 ZNF815PA8K554 130 aa16.58■□□□□ 0.24
GNPTAB-202ENST00000392919 IGLV7-43P04211 117 aa16.58■□□□□ 0.24
GNPTAB-202ENST00000392919 BOD1L2Q8IYS8 172 aa16.58■□□□□ 0.24
GNPTAB-202ENST00000392919 ADAMTSL4-AS1Q5T5F5 129 aa16.57■□□□□ 0.24
GNPTAB-202ENST00000392919 TNXBP22105 4242 aa16.56■□□□□ 0.24
GNPTAB-202ENST00000392919 LOC107984156A0A0G2JMH3 177 aa16.56■□□□□ 0.24
GNPTAB-202ENST00000392919 ARL17AQ8IVW1 177 aa16.56■□□□□ 0.24
GNPTAB-202ENST00000392919 LITAFQ99732 161 aa16.54■□□□□ 0.24
GNPTAB-202ENST00000392919 IGLV1-50A0A075B6I6 118 aa16.52■□□□□ 0.24
GNPTAB-202ENST00000392919 IGKV2-28A0A075B6P5 120 aa16.52■□□□□ 0.24
GNPTAB-202ENST00000392919 IGKV2D-28P01615 120 aa16.52■□□□□ 0.24
GNPTAB-202ENST00000392919 TIMM17BO60830 172 aa16.51■□□□□ 0.23
GNPTAB-202ENST00000392919 M0R378 163 aa16.5■□□□□ 0.23
GNPTAB-202ENST00000392919 SCGB1D1O95968 90 aa16.5■□□□□ 0.23
GNPTAB-202ENST00000392919 REG3GQ6UW15 175 aa16.5■□□□□ 0.23
GNPTAB-202ENST00000392919 SOSTDC1Q6X4U4 206 aa16.5■□□□□ 0.23
GNPTAB-202ENST00000392919 PCP2Q8IVA1 136 aa16.5■□□□□ 0.23
GNPTAB-202ENST00000392919 EIF4EBP3O60516 100 aaPredicted RBP16.49■□□□□ 0.23
GNPTAB-202ENST00000392919 BCE1O60756 84 aa16.48■□□□□ 0.23
GNPTAB-202ENST00000392919 KRTAP10-8P60410 259 aa16.48■□□□□ 0.23
GNPTAB-202ENST00000392919 UBR4Q5T4S7 5183 aa16.48■□□□□ 0.23
GNPTAB-202ENST00000392919 NCR3O14931 201 aa16.47■□□□□ 0.23
GNPTAB-202ENST00000392919 NPC2P61916 151 aa16.47■□□□□ 0.23
GNPTAB-202ENST00000392919 MIEN1Q9BRT3 115 aa16.46■□□□□ 0.23
GNPTAB-202ENST00000392919 HSBP1L1C9JCN9 74 aa16.45■□□□□ 0.22
GNPTAB-202ENST00000392919 TMA7Q9Y2S6 64 aaKnown RBP16.45■□□□□ 0.22
GNPTAB-202ENST00000392919 ZNF861PO60384 105 aa16.44■□□□□ 0.22
GNPTAB-202ENST00000392919 TMEM238C9JI98 176 aa16.43■□□□□ 0.22
GNPTAB-202ENST00000392919 SCGB1D4Q6XE38 83 aa16.43■□□□□ 0.22
GNPTAB-202ENST00000392919 LINC00308Q8TCZ7 52 aa16.43■□□□□ 0.22
GNPTAB-202ENST00000392919 DIRC1Q969H9 104 aa16.43■□□□□ 0.22
GNPTAB-202ENST00000392919 TMEM126AQ9H061 195 aa16.42■□□□□ 0.22
GNPTAB-202ENST00000392919 H0Y9J4 135 aa16.41■□□□□ 0.22
GNPTAB-202ENST00000392919 NDUFC2O95298 119 aa16.41■□□□□ 0.22
GNPTAB-202ENST00000392919 TRBV10-2A0A0K0K1G8 114 aa16.39■□□□□ 0.21
GNPTAB-202ENST00000392919 SPANXB1Q9NS25 103 aaPredicted RBP16.39■□□□□ 0.21
GNPTAB-202ENST00000392919 TRBV10-3A0A0K0K1G6 114 aa16.38■□□□□ 0.21
GNPTAB-202ENST00000392919 KRTAP13-1Q8IUC0 172 aa16.38■□□□□ 0.21
GNPTAB-202ENST00000392919 SPANXDQ9BXN6 97 aa16.38■□□□□ 0.21
GNPTAB-202ENST00000392919 SPANXCQ9NY87 97 aa16.38■□□□□ 0.21
GNPTAB-202ENST00000392919 RPL28P46779 137 aaKnown RBP16.37■□□□□ 0.21
GNPTAB-202ENST00000392919 JOSD1Q15040 202 aaPredicted RBP16.35■□□□□ 0.21
GNPTAB-202ENST00000392919 KCNQ1DNQ9H478 68 aa16.35■□□□□ 0.21
GNPTAB-202ENST00000392919 UBE2AP49459 152 aa16.34■□□□□ 0.21
GNPTAB-202ENST00000392919 PRYO14603 147 aa16.33■□□□□ 0.2
GNPTAB-202ENST00000392919 DDTP30046 118 aa16.32■□□□□ 0.2
GNPTAB-202ENST00000392919 FAM19A1Q7Z5A9 133 aa16.32■□□□□ 0.2
GNPTAB-202ENST00000392919 PRLHP81277 87 aa16.31■□□□□ 0.2
GNPTAB-202ENST00000392919 IGLV6-57P01721 117 aa16.3■□□□□ 0.2
GNPTAB-202ENST00000392919 SPRR1AP35321 89 aa16.3■□□□□ 0.2
GNPTAB-202ENST00000392919 Q6ZVH6 145 aa16.3■□□□□ 0.2
GNPTAB-202ENST00000392919 KRTAP1-4P0C5Y4 121 aa16.29■□□□□ 0.2
GNPTAB-202ENST00000392919 IFITM1P13164 125 aa16.28■□□□□ 0.2
GNPTAB-202ENST00000392919 KRTAP4-16G5E9R7 235 aaPredicted RBP16.27■□□□□ 0.2
GNPTAB-202ENST00000392919 S100A7L2Q5SY68 101 aa16.27■□□□□ 0.2
GNPTAB-202ENST00000392919 PPDPFQ9H3Y8 114 aa16.27■□□□□ 0.2
GNPTAB-202ENST00000392919 COX8AP10176 69 aa16.26■□□□□ 0.19
GNPTAB-202ENST00000392919 MUSTN1Q8IVN3 82 aa16.26■□□□□ 0.19
GNPTAB-202ENST00000392919 LINC00337Q8N6G1 96 aa16.26■□□□□ 0.19
GNPTAB-202ENST00000392919 PRR26Q8N8Z3 221 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms