RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 C6orf48Q9UBA6 75 aa12.13□□□□□ -0.47
ACTN4-202ENST00000390009 IGKV2D-24A0A075B6R9 120 aa12.13□□□□□ -0.47
ACTN4-202ENST00000390009 SNCGO76070 127 aa12.12□□□□□ -0.47
ACTN4-202ENST00000390009 TRACP01848 142 aa12.12□□□□□ -0.47
ACTN4-202ENST00000390009 C15orf56Q8N910 161 aa12.12□□□□□ -0.47
ACTN4-202ENST00000390009 TEX49A0A1B0GTD5 131 aa12.11□□□□□ -0.47
ACTN4-202ENST00000390009 NHLRC4P0CG21 123 aaPredicted RBP12.11□□□□□ -0.47
ACTN4-202ENST00000390009 GAGE2BQ13066 116 aa12.1□□□□□ -0.47
ACTN4-202ENST00000390009 GAGE2EQ4V326 116 aa12.1□□□□□ -0.47
ACTN4-202ENST00000390009 Q8NDZ9 215 aa12.1□□□□□ -0.47
ACTN4-202ENST00000390009 CAMK2N2Q96S95 79 aa12.1□□□□□ -0.47
ACTN4-202ENST00000390009 GAGE2DQ9UEU5 116 aa12.1□□□□□ -0.47
ACTN4-202ENST00000390009 Q9HAA7 133 aa12.1□□□□□ -0.47
ACTN4-202ENST00000390009 SS18L2Q9UHA2 77 aa12.08□□□□□ -0.47
ACTN4-202ENST00000390009 H0YGX0 51 aa12.08□□□□□ -0.48
ACTN4-202ENST00000390009 NDUFV3P56181 108 aaKnown RBP12.08□□□□□ -0.48
ACTN4-202ENST00000390009 COL7A1Q02388 2944 aa12.08□□□□□ -0.48
ACTN4-202ENST00000390009 DNAH9Q9NYC9 4486 aa12.07□□□□□ -0.48
ACTN4-202ENST00000390009 NCR3O14931 201 aa12.07□□□□□ -0.48
ACTN4-202ENST00000390009 TMEM126AQ9H061 195 aa12.07□□□□□ -0.48
ACTN4-202ENST00000390009 C2orf48Q96LS8 159 aa12.07□□□□□ -0.48
ACTN4-202ENST00000390009 Q6Q795 121 aa12.06□□□□□ -0.48
ACTN4-202ENST00000390009 A0A087WYN8 130 aa12.05□□□□□ -0.48
ACTN4-202ENST00000390009 Q6ZRU5 148 aa12.05□□□□□ -0.48
ACTN4-202ENST00000390009 B5MCH6 92 aa12.05□□□□□ -0.48
ACTN4-202ENST00000390009 B9D2Q9BPU9 175 aa12.05□□□□□ -0.48
ACTN4-202ENST00000390009 UPK3BQ9BT76 320 aa12.04□□□□□ -0.48
ACTN4-202ENST00000390009 STAB2Q8WWQ8 2551 aa12.04□□□□□ -0.48
ACTN4-202ENST00000390009 TTC32Q5I0X7 151 aa12.03□□□□□ -0.48
ACTN4-202ENST00000390009 XAGE1AQ9HD64 81 aa12.03□□□□□ -0.48
ACTN4-202ENST00000390009 BAALC-AS2P0C853 105 aa12.02□□□□□ -0.48
ACTN4-202ENST00000390009 S100A7L2Q5SY68 101 aa12.02□□□□□ -0.48
ACTN4-202ENST00000390009 DNAL4O96015 105 aa12.01□□□□□ -0.49
ACTN4-202ENST00000390009 F8WDY8 70 aa12□□□□□ -0.49
ACTN4-202ENST00000390009 LECT2O14960 151 aa12□□□□□ -0.49
ACTN4-202ENST00000390009 CCDC179H3BU77 68 aa11.99□□□□□ -0.49
ACTN4-202ENST00000390009 RPL18AQ02543 176 aaKnown RBP11.99□□□□□ -0.49
ACTN4-202ENST00000390009 NDUFC2-KCTD14E9PQ53 114 aa11.99□□□□□ -0.49
ACTN4-202ENST00000390009 DNAH1Q9P2D7 4330 aa11.99□□□□□ -0.49
ACTN4-202ENST00000390009 SYCNQ0VAF6 134 aa11.98□□□□□ -0.49
ACTN4-202ENST00000390009 C22orf24Q9Y442 160 aa11.98□□□□□ -0.49
ACTN4-202ENST00000390009 IGLV6-57P01721 117 aa11.97□□□□□ -0.49
ACTN4-202ENST00000390009 C6orf99Q4VX62 202 aa11.97□□□□□ -0.49
ACTN4-202ENST00000390009 RMI2Q96E14 147 aa11.97□□□□□ -0.49
ACTN4-202ENST00000390009 FAM240AA0A1B0GVK7 77 aa11.96□□□□□ -0.49
ACTN4-202ENST00000390009 CASC10Q5T4H9 136 aa11.96□□□□□ -0.5
ACTN4-202ENST00000390009 USP17L23D6RBM5 183 aa11.95□□□□□ -0.5
ACTN4-202ENST00000390009 Q6ZRP5 223 aa11.95□□□□□ -0.5
ACTN4-202ENST00000390009 VPREB1P12018 145 aa11.93□□□□□ -0.5
ACTN4-202ENST00000390009 A0A1B0GX51 115 aa11.93□□□□□ -0.5
ACTN4-202ENST00000390009 APLNQ9ULZ1 77 aa11.93□□□□□ -0.5
ACTN4-202ENST00000390009 TRBV10-3A0A0K0K1G6 114 aa11.92□□□□□ -0.5
ACTN4-202ENST00000390009 SLPIP03973 132 aa11.92□□□□□ -0.5
ACTN4-202ENST00000390009 Q8N814 137 aa11.92□□□□□ -0.5
ACTN4-202ENST00000390009 LYSTQ99698 3801 aa11.91□□□□□ -0.5
ACTN4-202ENST00000390009 LINC00167Q96N53 147 aa11.9□□□□□ -0.5
ACTN4-202ENST00000390009 UBE2DNLQ8IWF7 75 aa11.9□□□□□ -0.5
ACTN4-202ENST00000390009 ORMDL1Q9P0S3 153 aa11.9□□□□□ -0.5
ACTN4-202ENST00000390009 TRAV23DV6A0A075B6W5 121 aa11.89□□□□□ -0.51
ACTN4-202ENST00000390009 TRBV7-7A0A0K0K1E9 115 aa11.89□□□□□ -0.51
ACTN4-202ENST00000390009 KRTAP1-5Q9BYS1 174 aa11.89□□□□□ -0.51
ACTN4-202ENST00000390009 DYNC2H1Q8NCM8 4307 aaKnown RBP11.88□□□□□ -0.51
ACTN4-202ENST00000390009 C9orf129Q5T035 196 aaKnown RBP11.88□□□□□ -0.51
ACTN4-202ENST00000390009 M0R378 163 aa11.87□□□□□ -0.51
ACTN4-202ENST00000390009 LINC00575Q6W349 94 aa11.87□□□□□ -0.51
ACTN4-202ENST00000390009 TLX1NBP0CAT3 122 aa11.87□□□□□ -0.51
ACTN4-202ENST00000390009 INAFM2P0DMQ5 153 aa11.86□□□□□ -0.51
ACTN4-202ENST00000390009 CSMD3Q7Z407 3707 aa11.85□□□□□ -0.51
ACTN4-202ENST00000390009 DIRC1Q969H9 104 aa11.85□□□□□ -0.51
ACTN4-202ENST00000390009 ZNF73O43830 326 aaPredicted RBP11.84□□□□□ -0.51
ACTN4-202ENST00000390009 hADV29S1A0JD25 119 aa11.83□□□□□ -0.52
ACTN4-202ENST00000390009 ACYP1P07311 99 aa11.83□□□□□ -0.52
ACTN4-202ENST00000390009 NUPR2A6NF83 97 aa11.83□□□□□ -0.52
ACTN4-202ENST00000390009 OBSCN-AS1Q96MR7 158 aa11.83□□□□□ -0.52
ACTN4-202ENST00000390009 SMIM20Q8N5G0 67 aa11.81□□□□□ -0.52
ACTN4-202ENST00000390009 PRKDCP78527 4128 aaKnown RBP11.81□□□□□ -0.52
ACTN4-202ENST00000390009 TMEM256-PLSCR3K7ERE1 68 aa11.81□□□□□ -0.52
ACTN4-202ENST00000390009 SERTAD4-AS1Q5TG53 156 aa11.81□□□□□ -0.52
ACTN4-202ENST00000390009 IMUPQ9GZP8 106 aa11.8□□□□□ -0.52
ACTN4-202ENST00000390009 FAM236AA0A1B0GUQ0 79 aa11.8□□□□□ -0.52
ACTN4-202ENST00000390009 FAM236BA0A1B0GV22 79 aa11.8□□□□□ -0.52
ACTN4-202ENST00000390009 NKAPP1Q8N9T2 125 aa11.8□□□□□ -0.52
ACTN4-202ENST00000390009 C14orf132Q9NPU4 83 aa11.8□□□□□ -0.52
ACTN4-202ENST00000390009 SMCR5Q8TEV8 140 aa11.79□□□□□ -0.52
ACTN4-202ENST00000390009 DNAH10Q8IVF4 4471 aa11.79□□□□□ -0.52
ACTN4-202ENST00000390009 COX7BP24311 80 aa11.78□□□□□ -0.52
ACTN4-202ENST00000390009 ELOF1P60002 83 aaKnown RBP11.78□□□□□ -0.52
ACTN4-202ENST00000390009 PLECQ15149 4684 aaKnown RBP11.78□□□□□ -0.52
ACTN4-202ENST00000390009 DNAH7Q8WXX0 4024 aa11.78□□□□□ -0.52
ACTN4-202ENST00000390009 TRBV7-6A0A0J9YX20 115 aa11.78□□□□□ -0.52
ACTN4-202ENST00000390009 PSCAO43653 123 aa11.78□□□□□ -0.52
ACTN4-202ENST00000390009 PLA2G2DQ9UNK4 145 aa11.78□□□□□ -0.52
ACTN4-202ENST00000390009 DNHD1Q96M86 4753 aa11.77□□□□□ -0.53
ACTN4-202ENST00000390009 GAGE2AQ6NT46 116 aa11.77□□□□□ -0.53
ACTN4-202ENST00000390009 TENM2Q9NT68 2774 aa11.76□□□□□ -0.53
ACTN4-202ENST00000390009 C7orf33Q8WU49 177 aa11.76□□□□□ -0.53
ACTN4-202ENST00000390009 Q6ZQY7 126 aa11.75□□□□□ -0.53
ACTN4-202ENST00000390009 LINC00643Q86TS7 51 aa11.75□□□□□ -0.53
ACTN4-202ENST00000390009 LOC107984640A0A0U1RRK4 108 aa11.75□□□□□ -0.53
ACTN4-202ENST00000390009 FAM168BA1KXE4 195 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms