RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 ZNF815PA8K554 130 aa11.03□□□□□ -0.64
CD9-202ENST00000382515 M0QXV9 152 aa11.03□□□□□ -0.64
CD9-202ENST00000382515 TIMM17BO60830 172 aa11.03□□□□□ -0.64
CD9-202ENST00000382515 KRTAP7-1Q8IUC3 87 aa11.03□□□□□ -0.64
CD9-202ENST00000382515 ARL17AQ8IVW1 177 aa11.03□□□□□ -0.64
CD9-202ENST00000382515 MIR7-3HGQ8N6C7 128 aa11.03□□□□□ -0.64
CD9-202ENST00000382515 ANKRD39Q53RE8 183 aa11.02□□□□□ -0.65
CD9-202ENST00000382515 PHF5AQ7RTV0 110 aaKnown RBP11.02□□□□□ -0.65
CD9-202ENST00000382515 A0A0U1RRA0 63 aa11.01□□□□□ -0.65
CD9-202ENST00000382515 SERTAD4-AS1Q5TG53 156 aa11.01□□□□□ -0.65
CD9-202ENST00000382515 MRPL55Q7Z7F7 128 aaKnown RBP11.01□□□□□ -0.65
CD9-202ENST00000382515 NKAPP1Q8N9T2 125 aa11.01□□□□□ -0.65
CD9-202ENST00000382515 TMA7Q9Y2S6 64 aaKnown RBP11.01□□□□□ -0.65
CD9-202ENST00000382515 JOSD1Q15040 202 aaPredicted RBP11□□□□□ -0.65
CD9-202ENST00000382515 PCLOQ9Y6V0 5065 aa11□□□□□ -0.65
CD9-202ENST00000382515 MIEN1Q9BRT3 115 aa10.99□□□□□ -0.65
CD9-202ENST00000382515 VPREB1P12018 145 aa10.98□□□□□ -0.65
CD9-202ENST00000382515 UBE2BP63146 152 aa10.98□□□□□ -0.65
CD9-202ENST00000382515 KRTAP10-4P60372 401 aaPredicted RBP10.97□□□□□ -0.65
CD9-202ENST00000382515 SCGB1D4Q6XE38 83 aa10.97□□□□□ -0.65
CD9-202ENST00000382515 Q6ZVH6 145 aa10.97□□□□□ -0.65
CD9-202ENST00000382515 COPS9Q8WXC6 57 aa10.97□□□□□ -0.65
CD9-202ENST00000382515 PRR3P79522 188 aaKnown RBP10.96□□□□□ -0.65
CD9-202ENST00000382515 BOD1L2Q8IYS8 172 aa10.96□□□□□ -0.65
CD9-202ENST00000382515 SRRM2Q9UQ35 2752 aaKnown RBP10.96□□□□□ -0.66
CD9-202ENST00000382515 TMEM238C9JI98 176 aa10.95□□□□□ -0.66
CD9-202ENST00000382515 NDUFC2O95298 119 aa10.95□□□□□ -0.66
CD9-202ENST00000382515 LINC00167Q96N53 147 aa10.95□□□□□ -0.66
CD9-202ENST00000382515 KRTAP4-5Q9BYR2 181 aa10.95□□□□□ -0.66
CD9-202ENST00000382515 PSORS1C2Q9UIG4 136 aa10.95□□□□□ -0.66
CD9-202ENST00000382515 M0R378 163 aa10.94□□□□□ -0.66
CD9-202ENST00000382515 INAFM2P0DMQ5 153 aa10.94□□□□□ -0.66
CD9-202ENST00000382515 ADAMTSL4-AS1Q5T5F5 129 aa10.94□□□□□ -0.66
CD9-202ENST00000382515 PCP2Q8IVA1 136 aa10.94□□□□□ -0.66
CD9-202ENST00000382515 TTTY13Q9BZ97 58 aa10.94□□□□□ -0.66
CD9-202ENST00000382515 LITAFQ99732 161 aa10.93□□□□□ -0.66
CD9-202ENST00000382515 PPDPFQ9H3Y8 114 aa10.93□□□□□ -0.66
CD9-202ENST00000382515 TRBV10-2A0A0K0K1G8 114 aa10.92□□□□□ -0.66
CD9-202ENST00000382515 IFITM1P13164 125 aa10.92□□□□□ -0.66
CD9-202ENST00000382515 DAND5Q8N907 189 aa10.92□□□□□ -0.66
CD9-202ENST00000382515 C1orf137Q5JT78 98 aa10.91□□□□□ -0.66
CD9-202ENST00000382515 SPANXDQ9BXN6 97 aa10.91□□□□□ -0.66
CD9-202ENST00000382515 SPANXCQ9NY87 97 aa10.91□□□□□ -0.66
CD9-202ENST00000382515 IGLV1-50A0A075B6I6 118 aa10.9□□□□□ -0.66
CD9-202ENST00000382515 DLEU1O43261 78 aa10.9□□□□□ -0.66
CD9-202ENST00000382515 LINC00308Q8TCZ7 52 aa10.9□□□□□ -0.66
CD9-202ENST00000382515 VAMP8Q9BV40 100 aa10.9□□□□□ -0.66
CD9-202ENST00000382515 COX8AP10176 69 aa10.89□□□□□ -0.67
CD9-202ENST00000382515 S100A12P80511 92 aa10.89□□□□□ -0.67
CD9-202ENST00000382515 SPINK6Q6UWN8 80 aa10.89□□□□□ -0.67
CD9-202ENST00000382515 SPANXB1Q9NS25 103 aaPredicted RBP10.89□□□□□ -0.67
CD9-202ENST00000382515 GAGE10A6NGK3 116 aa10.88□□□□□ -0.67
CD9-202ENST00000382515 SRSF9Q13242 221 aaKnown RBP eCLIP10.88□□□□□ -0.67
CD9-202ENST00000382515 LINC00518Q8N0U6 118 aa10.88□□□□□ -0.67
CD9-202ENST00000382515 RPL37AP8A6NKH3 93 aa10.87□□□□□ -0.67
CD9-202ENST00000382515 IGLV7-43P04211 117 aa10.87□□□□□ -0.67
CD9-202ENST00000382515 PYY3Q5JQD4 70 aa10.87□□□□□ -0.67
CD9-202ENST00000382515 KRTAP11-1Q8IUC1 163 aa10.87□□□□□ -0.67
CD9-202ENST00000382515 Q8NDZ9 215 aa10.87□□□□□ -0.67
CD9-202ENST00000382515 CBY1Q9Y3M2 126 aa10.87□□□□□ -0.67
CD9-202ENST00000382515 ABCA13Q86UQ4 5058 aa10.87□□□□□ -0.67
CD9-202ENST00000382515 SPATA45Q537H7 98 aa10.86□□□□□ -0.67
CD9-202ENST00000382515 BCE1O60756 84 aa10.85□□□□□ -0.67
CD9-202ENST00000382515 SOSTDC1Q6X4U4 206 aa10.85□□□□□ -0.67
CD9-202ENST00000382515 PAM16Q9Y3D7 125 aa10.85□□□□□ -0.67
CD9-202ENST00000382515 IGKV2-28A0A075B6P5 120 aa10.83□□□□□ -0.68
CD9-202ENST00000382515 IGKV2D-28P01615 120 aa10.83□□□□□ -0.68
CD9-202ENST00000382515 REG3GQ6UW15 175 aa10.83□□□□□ -0.68
CD9-202ENST00000382515 KCNQ1DNQ9H478 68 aa10.83□□□□□ -0.68
CD9-202ENST00000382515 ZNF861PO60384 105 aa10.82□□□□□ -0.68
CD9-202ENST00000382515 NPC2P61916 151 aa10.82□□□□□ -0.68
CD9-202ENST00000382515 S100A7L2Q5SY68 101 aa10.82□□□□□ -0.68
CD9-202ENST00000382515 DIRC1Q969H9 104 aa10.82□□□□□ -0.68
CD9-202ENST00000382515 PRYO14603 147 aa10.81□□□□□ -0.68
CD9-202ENST00000382515 NCR3O14931 201 aa10.81□□□□□ -0.68
CD9-202ENST00000382515 EIF4EBP3O60516 100 aaPredicted RBP10.81□□□□□ -0.68
CD9-202ENST00000382515 DDTP30046 118 aa10.81□□□□□ -0.68
CD9-202ENST00000382515 RPL28P46779 137 aaKnown RBP10.81□□□□□ -0.68
CD9-202ENST00000382515 SLC25A34Q6PIV7 304 aa10.81□□□□□ -0.68
CD9-202ENST00000382515 TMEM126AQ9H061 195 aa10.81□□□□□ -0.68
CD9-202ENST00000382515 OXTP01178 125 aa10.8□□□□□ -0.68
CD9-202ENST00000382515 IGLV6-57P01721 117 aa10.8□□□□□ -0.68
CD9-202ENST00000382515 HNRNPA3P51991 378 aaKnown RBP10.8□□□□□ -0.68
CD9-202ENST00000382515 MUSTN1Q8IVN3 82 aa10.8□□□□□ -0.68
CD9-202ENST00000382515 C14orf144Q96I85 54 aa10.8□□□□□ -0.68
CD9-202ENST00000382515 HIGD1BQ9P298 99 aa10.8□□□□□ -0.68
CD9-202ENST00000382515 TRBV10-3A0A0K0K1G6 114 aa10.79□□□□□ -0.68
CD9-202ENST00000382515 LCE2DQ5TA82 110 aaPredicted RBP10.79□□□□□ -0.68
CD9-202ENST00000382515 H0Y9J4 135 aa10.78□□□□□ -0.68
CD9-202ENST00000382515 SPRR1AP35321 89 aa10.77□□□□□ -0.69
CD9-202ENST00000382515 UBE2AP49459 152 aa10.77□□□□□ -0.69
CD9-202ENST00000382515 LINC00337Q8N6G1 96 aa10.77□□□□□ -0.69
CD9-202ENST00000382515 KRTAP29-1A8MX34 341 aaPredicted RBP10.76□□□□□ -0.69
CD9-202ENST00000382515 HIST1H4GQ99525 98 aa10.75□□□□□ -0.69
CD9-202ENST00000382515 TRAV13-2A0A0B4J235 113 aa10.74□□□□□ -0.69
CD9-202ENST00000382515 HINT1P49773 126 aaPredicted RBP10.74□□□□□ -0.69
CD9-202ENST00000382515 FAM19A1Q7Z5A9 133 aa10.74□□□□□ -0.69
CD9-202ENST00000382515 KRTAP13-1Q8IUC0 172 aa10.74□□□□□ -0.69
CD9-202ENST00000382515 OR13C6PQ8NH95 151 aa10.74□□□□□ -0.69
CD9-202ENST00000382515 FLG2Q5D862 2391 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms