RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 H0Y9J4 135 aa8.43□□□□□ -1.06
GABPB1-203ENST00000380877 C3orf84H3BNL1 204 aa8.43□□□□□ -1.06
GABPB1-203ENST00000380877 NBEAQ8NFP9 2946 aa8.42□□□□□ -1.06
GABPB1-203ENST00000380877 ATP5EP2Q5VTU8 51 aa8.42□□□□□ -1.06
GABPB1-203ENST00000380877 PLAC8L1A1L4L8 177 aa8.42□□□□□ -1.06
GABPB1-203ENST00000380877 SPTBN5Q9NRC6 3674 aaKnown RBP8.42□□□□□ -1.06
GABPB1-203ENST00000380877 COL12A1Q99715 3063 aa8.42□□□□□ -1.06
GABPB1-203ENST00000380877 NDUFV3P56181 108 aaKnown RBP8.42□□□□□ -1.06
GABPB1-203ENST00000380877 ENHOQ6UWT2 76 aa8.41□□□□□ -1.06
GABPB1-203ENST00000380877 SETXQ7Z333 2677 aaKnown RBP8.4□□□□□ -1.06
GABPB1-203ENST00000380877 GCN1Q92616 2671 aaKnown RBP8.4□□□□□ -1.06
GABPB1-203ENST00000380877 MP68P56378 58 aa8.4□□□□□ -1.07
GABPB1-203ENST00000380877 SMIM20Q8N5G0 67 aa8.4□□□□□ -1.07
GABPB1-203ENST00000380877 SPEGQ15772 3267 aa8.39□□□□□ -1.07
GABPB1-203ENST00000380877 SOSTDC1Q6X4U4 206 aa8.39□□□□□ -1.07
GABPB1-203ENST00000380877 XGP55808 180 aa8.38□□□□□ -1.07
GABPB1-203ENST00000380877 KRTAP10-11P60412 298 aa8.38□□□□□ -1.07
GABPB1-203ENST00000380877 C10orf25Q5T742 122 aa8.38□□□□□ -1.07
GABPB1-203ENST00000380877 REG3GQ6UW15 175 aa8.38□□□□□ -1.07
GABPB1-203ENST00000380877 CR1P17927 2039 aa8.38□□□□□ -1.07
GABPB1-203ENST00000380877 C6orf48Q9UBA6 75 aa8.38□□□□□ -1.07
GABPB1-203ENST00000380877 MRPL55Q7Z7F7 128 aaKnown RBP8.37□□□□□ -1.07
GABPB1-203ENST00000380877 MDFIQ99750 246 aa8.37□□□□□ -1.07
GABPB1-203ENST00000380877 ZNF706Q9Y5V0 76 aaPredicted RBP8.37□□□□□ -1.07
GABPB1-203ENST00000380877 NOTCH1P46531 2555 aa8.37□□□□□ -1.07
GABPB1-203ENST00000380877 FAM240AA0A1B0GVK7 77 aa8.36□□□□□ -1.07
GABPB1-203ENST00000380877 C1orf134Q5TEV5 83 aa8.36□□□□□ -1.07
GABPB1-203ENST00000380877 UBR5O95071 2799 aaPredicted RBP8.36□□□□□ -1.07
GABPB1-203ENST00000380877 IGLV5-52A0A0A0MRZ9 124 aa8.36□□□□□ -1.07
GABPB1-203ENST00000380877 LINC00575Q6W349 94 aa8.35□□□□□ -1.07
GABPB1-203ENST00000380877 LINC00588Q9Y4M8 146 aa8.35□□□□□ -1.07
GABPB1-203ENST00000380877 DMXL1Q9Y485 3027 aa8.35□□□□□ -1.07
GABPB1-203ENST00000380877 K7EIL1 84 aa8.34□□□□□ -1.07
GABPB1-203ENST00000380877 IMUPQ9GZP8 106 aa8.34□□□□□ -1.07
GABPB1-203ENST00000380877 PRYO14603 147 aa8.34□□□□□ -1.07
GABPB1-203ENST00000380877 LINC00612Q8N6U2 182 aa8.33□□□□□ -1.08
GABPB1-203ENST00000380877 SS18L2Q9UHA2 77 aa8.33□□□□□ -1.08
GABPB1-203ENST00000380877 ZNF575Q86XF7 245 aa8.33□□□□□ -1.08
GABPB1-203ENST00000380877 IGLV9-49A0A0B4J1Y8 123 aa8.33□□□□□ -1.08
GABPB1-203ENST00000380877 C22orf24Q9Y442 160 aa8.32□□□□□ -1.08
GABPB1-203ENST00000380877 C1orf137Q5JT78 98 aa8.32□□□□□ -1.08
GABPB1-203ENST00000380877 ZZEF1O43149 2961 aa8.32□□□□□ -1.08
GABPB1-203ENST00000380877 C20orf197Q8N268 126 aa8.31□□□□□ -1.08
GABPB1-203ENST00000380877 LITAFQ99732 161 aa8.31□□□□□ -1.08
GABPB1-203ENST00000380877 TACC2O95359 2948 aa8.3□□□□□ -1.08
GABPB1-203ENST00000380877 BAHCC1Q9P281 2608 aa8.3□□□□□ -1.08
GABPB1-203ENST00000380877 Q6JHZ5 121 aa8.29□□□□□ -1.08
GABPB1-203ENST00000380877 UQCRQO14949 82 aa8.29□□□□□ -1.08
GABPB1-203ENST00000380877 DNAH10OSP0CZ25 163 aa8.29□□□□□ -1.08
GABPB1-203ENST00000380877 HRCT1Q6UXD1 115 aa8.29□□□□□ -1.08
GABPB1-203ENST00000380877 SPINK6Q6UWN8 80 aa8.29□□□□□ -1.08
GABPB1-203ENST00000380877 SPATA3Q8NHX4 192 aa8.29□□□□□ -1.08
GABPB1-203ENST00000380877 FAM19A3Q7Z5A8 133 aa8.28□□□□□ -1.08
GABPB1-203ENST00000380877 ITPR1Q14643 2758 aa8.28□□□□□ -1.08
GABPB1-203ENST00000380877 PRLHP81277 87 aa8.28□□□□□ -1.08
GABPB1-203ENST00000380877 SMCPP49901 116 aaPredicted RBP8.27□□□□□ -1.09
GABPB1-203ENST00000380877 KALRNO60229 2985 aa8.27□□□□□ -1.09
GABPB1-203ENST00000380877 LINC00167Q96N53 147 aa8.27□□□□□ -1.09
GABPB1-203ENST00000380877 FAM218AQ96MZ4 157 aa8.26□□□□□ -1.09
GABPB1-203ENST00000380877 ITPR2Q14571 2701 aa8.26□□□□□ -1.09
GABPB1-203ENST00000380877 NBDYA0A0U1RRE5 68 aa8.26□□□□□ -1.09
GABPB1-203ENST00000380877 GVQW2A0A096LPI5 108 aaPredicted RBP8.26□□□□□ -1.09
GABPB1-203ENST00000380877 PRO0461Q9UI25 63 aa8.26□□□□□ -1.09
GABPB1-203ENST00000380877 WFDC13Q8IUB5 93 aa8.25□□□□□ -1.09
GABPB1-203ENST00000380877 PRR34Q9NV39 138 aa8.25□□□□□ -1.09
GABPB1-203ENST00000380877 Q9BRP9 147 aa8.24□□□□□ -1.09
GABPB1-203ENST00000380877 IGKV4-1P06312 121 aa8.24□□□□□ -1.09
GABPB1-203ENST00000380877 LRBAP50851 2863 aa8.24□□□□□ -1.09
GABPB1-203ENST00000380877 TMEM258P61165 79 aa8.24□□□□□ -1.09
GABPB1-203ENST00000380877 SERP2Q8N6R1 65 aa8.23□□□□□ -1.09
GABPB1-203ENST00000380877 Q6Q795 121 aa8.23□□□□□ -1.09
GABPB1-203ENST00000380877 EIF4EBP3O60516 100 aaPredicted RBP8.23□□□□□ -1.09
GABPB1-203ENST00000380877 C3orf22Q8N5N4 141 aa8.23□□□□□ -1.09
GABPB1-203ENST00000380877 LINC00846Q9NV44 126 aa8.22□□□□□ -1.09
GABPB1-203ENST00000380877 SMCR5Q8TEV8 140 aa8.22□□□□□ -1.09
GABPB1-203ENST00000380877 A0A087WVE0 104 aa8.22□□□□□ -1.09
GABPB1-203ENST00000380877 TM2D3Q9BRN9 247 aa8.22□□□□□ -1.09
GABPB1-203ENST00000380877 KIAA0087Q14695 138 aa8.21□□□□□ -1.1
GABPB1-203ENST00000380877 Q6ZRP5 223 aa8.21□□□□□ -1.1
GABPB1-203ENST00000380877 A0A087WSZ3 146 aa8.2□□□□□ -1.1
GABPB1-203ENST00000380877 NBEAL2Q6ZNJ1 2754 aa8.2□□□□□ -1.1
GABPB1-203ENST00000380877 ELOF1P60002 83 aaKnown RBP8.19□□□□□ -1.1
GABPB1-203ENST00000380877 LOC400499M0QZD8 3231 aa8.19□□□□□ -1.1
GABPB1-203ENST00000380877 TRBV7-6A0A0J9YX20 115 aa8.19□□□□□ -1.1
GABPB1-203ENST00000380877 Q6ZVQ6 151 aa8.18□□□□□ -1.1
GABPB1-203ENST00000380877 CDIP1Q9H305 208 aa8.18□□□□□ -1.1
GABPB1-203ENST00000380877 VPREB1P12018 145 aa8.18□□□□□ -1.1
GABPB1-203ENST00000380877 CIRBP-AS1Q8TBR5 109 aa8.18□□□□□ -1.1
GABPB1-203ENST00000380877 UTP20O75691 2785 aaKnown RBP8.18□□□□□ -1.1
GABPB1-203ENST00000380877 J3KT08 172 aa8.18□□□□□ -1.1
GABPB1-203ENST00000380877 COX7CP15954 63 aa8.18□□□□□ -1.1
GABPB1-203ENST00000380877 C16orf90A8MZG2 172 aa8.17□□□□□ -1.1
GABPB1-203ENST00000380877 CHKB-CPT1BH3BT56 60 aa8.17□□□□□ -1.1
GABPB1-203ENST00000380877 CFAP47Q6ZTR5 3102 aa8.16□□□□□ -1.1
GABPB1-203ENST00000380877 PHF5AQ7RTV0 110 aaKnown RBP8.15□□□□□ -1.1
GABPB1-203ENST00000380877 WWC2-AS2Q96NR7 200 aa8.15□□□□□ -1.1
GABPB1-203ENST00000380877 WIPF1O43516 503 aa8.15□□□□□ -1.1
GABPB1-203ENST00000380877 CHTF8P0CG12 524 aa8.15□□□□□ -1.1
GABPB1-203ENST00000380877 Q6ZRX8 168 aa8.15□□□□□ -1.1
GABPB1-203ENST00000380877 C15orf56Q8N910 161 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms