RNA–Protein interactions for RNA: ENST00000380692.6

MSL3-205, Transcript of MSL complex subunit 3, human

TSL 3

Gene MSL3, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSL3-205	ENST00000380692	C9orf129	Q5T035	196 aa	Known RBP	5.76	□□□□□ -1.49
MSL3-205	ENST00000380692	KRTAP17-1	Q9BYP8	105 aa		5.76	□□□□□ -1.49
MSL3-205	ENST00000380692		A0A0U1RRA0	63 aa		5.75	□□□□□ -1.49
MSL3-205	ENST00000380692	FAM168B	A1KXE4	195 aa		5.75	□□□□□ -1.49
MSL3-205	ENST00000380692	NMU	P48645	174 aa		5.75	□□□□□ -1.49
MSL3-205	ENST00000380692	TSPEAR-AS2	P59090	65 aa		5.75	□□□□□ -1.49
MSL3-205	ENST00000380692	MEIG1	Q5JSS6	88 aa		5.75	□□□□□ -1.49
MSL3-205	ENST00000380692		Q5VSD8	79 aa		5.75	□□□□□ -1.49
MSL3-205	ENST00000380692	ATOH7	Q8N100	152 aa		5.75	□□□□□ -1.49
MSL3-205	ENST00000380692	C7orf33	Q8WU49	177 aa		5.75	□□□□□ -1.49
MSL3-205	ENST00000380692	SCGB1D1	O95968	90 aa		5.74	□□□□□ -1.49
MSL3-205	ENST00000380692	PLA2G1B	P04054	148 aa	Known RBP	5.74	□□□□□ -1.49
MSL3-205	ENST00000380692	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.74	□□□□□ -1.49
MSL3-205	ENST00000380692	TMA7	Q9Y2S6	64 aa	Known RBP	5.74	□□□□□ -1.49
MSL3-205	ENST00000380692	SMIM13	P0DJ93	91 aa		5.73	□□□□□ -1.49
MSL3-205	ENST00000380692	SND1-IT1	Q9HBX3	110 aa		5.73	□□□□□ -1.49
MSL3-205	ENST00000380692	APOB	P04114	4563 aa	Known RBP	5.73	□□□□□ -1.49
MSL3-205	ENST00000380692	DNAH8	Q96JB1	4490 aa		5.72	□□□□□ -1.49
MSL3-205	ENST00000380692	IGKV2D-26	A0A0A0MRZ7	120 aa		5.72	□□□□□ -1.49
MSL3-205	ENST00000380692	RPL37A	P61513	92 aa	Known RBP	5.72	□□□□□ -1.49
MSL3-205	ENST00000380692	PHF5A	Q7RTV0	110 aa	Known RBP	5.72	□□□□□ -1.49
MSL3-205	ENST00000380692	KRTAP7-1	Q8IUC3	87 aa		5.72	□□□□□ -1.49
MSL3-205	ENST00000380692	KRTAP4-5	Q9BYR2	181 aa		5.72	□□□□□ -1.49
MSL3-205	ENST00000380692	RYR1	P21817	5038 aa		5.72	□□□□□ -1.49
MSL3-205	ENST00000380692	HSBP1L1	C9JCN9	74 aa		5.71	□□□□□ -1.5
MSL3-205	ENST00000380692		M0QXV9	152 aa		5.71	□□□□□ -1.5
MSL3-205	ENST00000380692	SERTAD4-AS1	Q5TG53	156 aa		5.71	□□□□□ -1.5
MSL3-205	ENST00000380692	MIR7-3HG	Q8N6C7	128 aa		5.71	□□□□□ -1.5
MSL3-205	ENST00000380692	PLA2G2D	Q9UNK4	145 aa		5.71	□□□□□ -1.5
MSL3-205	ENST00000380692	C22orf24	Q9Y442	160 aa		5.71	□□□□□ -1.5
MSL3-205	ENST00000380692	HSPG2	P98160	4391 aa		5.7	□□□□□ -1.5
MSL3-205	ENST00000380692		A0A0J9YXY3	114 aa		5.7	□□□□□ -1.5
MSL3-205	ENST00000380692	ZNF815P	A8K554	130 aa		5.7	□□□□□ -1.5
MSL3-205	ENST00000380692	RPL24	P83731	157 aa	Known RBP	5.7	□□□□□ -1.5
MSL3-205	ENST00000380692	LBH	Q53QV2	105 aa	Predicted RBP	5.7	□□□□□ -1.5
MSL3-205	ENST00000380692	TTTY13	Q9BZ97	58 aa		5.7	□□□□□ -1.5
MSL3-205	ENST00000380692	UBE2B	P63146	152 aa		5.69	□□□□□ -1.5
MSL3-205	ENST00000380692	DAND5	Q8N907	189 aa		5.69	□□□□□ -1.5
MSL3-205	ENST00000380692	NKAPP1	Q8N9T2	125 aa		5.69	□□□□□ -1.5
MSL3-205	ENST00000380692	MRPL55	Q7Z7F7	128 aa	Known RBP	5.68	□□□□□ -1.5
MSL3-205	ENST00000380692	BOD1L2	Q8IYS8	172 aa		5.68	□□□□□ -1.5
MSL3-205	ENST00000380692	KRTAP4-9	Q9BYQ8	210 aa		5.68	□□□□□ -1.5
MSL3-205	ENST00000380692	TP73-AS1	Q9UF72	201 aa		5.68	□□□□□ -1.5
MSL3-205	ENST00000380692	HERC2	O95714	4834 aa		5.67	□□□□□ -1.5
MSL3-205	ENST00000380692	IGLV5-37	A0A075B6J1	123 aa		5.67	□□□□□ -1.5
MSL3-205	ENST00000380692	GAGE10	A6NGK3	116 aa		5.67	□□□□□ -1.5
MSL3-205	ENST00000380692	INAFM2	P0DMQ5	153 aa		5.67	□□□□□ -1.5
MSL3-205	ENST00000380692	VPREB1	P12018	145 aa		5.67	□□□□□ -1.5
MSL3-205	ENST00000380692	KRTAP10-4	P60372	401 aa	Predicted RBP	5.67	□□□□□ -1.5
MSL3-205	ENST00000380692	PRR3	P79522	188 aa	Known RBP	5.67	□□□□□ -1.5
MSL3-205	ENST00000380692	JOSD1	Q15040	202 aa	Predicted RBP	5.67	□□□□□ -1.5
MSL3-205	ENST00000380692	ADAMTSL4-AS1	Q5T5F5	129 aa		5.67	□□□□□ -1.5
MSL3-205	ENST00000380692	SCGB1D4	Q6XE38	83 aa		5.67	□□□□□ -1.5
MSL3-205	ENST00000380692	PCP2	Q8IVA1	136 aa		5.67	□□□□□ -1.5
MSL3-205	ENST00000380692	LINC00167	Q96N53	147 aa		5.67	□□□□□ -1.5
MSL3-205	ENST00000380692	MIEN1	Q9BRT3	115 aa		5.67	□□□□□ -1.5
MSL3-205	ENST00000380692	PSORS1C2	Q9UIG4	136 aa		5.67	□□□□□ -1.5
MSL3-205	ENST00000380692	RPL37AP8	A6NKH3	93 aa		5.66	□□□□□ -1.5
MSL3-205	ENST00000380692	TIMM17B	O60830	172 aa		5.66	□□□□□ -1.5
MSL3-205	ENST00000380692	C1orf137	Q5JT78	98 aa		5.66	□□□□□ -1.5
MSL3-205	ENST00000380692	KRTAP11-1	Q8IUC1	163 aa		5.66	□□□□□ -1.5
MSL3-205	ENST00000380692	LOC107984156	A0A0G2JMH3	177 aa		5.65	□□□□□ -1.5
MSL3-205	ENST00000380692	NPC2	P61916	151 aa		5.65	□□□□□ -1.5
MSL3-205	ENST00000380692	ARL17A	Q8IVW1	177 aa		5.65	□□□□□ -1.5
MSL3-205	ENST00000380692		Q8NDZ9	215 aa		5.65	□□□□□ -1.5
MSL3-205	ENST00000380692	LITAF	Q99732	161 aa		5.65	□□□□□ -1.5
MSL3-205	ENST00000380692	FAT1	Q14517	4588 aa		5.64	□□□□□ -1.51
MSL3-205	ENST00000380692	TMEM238	C9JI98	176 aa		5.64	□□□□□ -1.51
MSL3-205	ENST00000380692		M0R378	163 aa		5.64	□□□□□ -1.51
MSL3-205	ENST00000380692	IGLV1-50	A0A075B6I6	118 aa		5.63	□□□□□ -1.51
MSL3-205	ENST00000380692	IGKV2-28	A0A075B6P5	120 aa		5.63	□□□□□ -1.51
MSL3-205	ENST00000380692	IGKV2D-28	P01615	120 aa		5.63	□□□□□ -1.51
MSL3-205	ENST00000380692	HNRNPA3	P51991	378 aa	Known RBP	5.63	□□□□□ -1.51
MSL3-205	ENST00000380692	SOSTDC1	Q6X4U4	206 aa		5.63	□□□□□ -1.51
MSL3-205	ENST00000380692	LINC00308	Q8TCZ7	52 aa		5.63	□□□□□ -1.51
MSL3-205	ENST00000380692	VAMP8	Q9BV40	100 aa		5.63	□□□□□ -1.51
MSL3-205	ENST00000380692	PAM16	Q9Y3D7	125 aa		5.63	□□□□□ -1.51
MSL3-205	ENST00000380692	NCR3	O14931	201 aa		5.62	□□□□□ -1.51
MSL3-205	ENST00000380692	NDUFC2	O95298	119 aa		5.62	□□□□□ -1.51
MSL3-205	ENST00000380692	IGLV7-43	P04211	117 aa		5.62	□□□□□ -1.51
MSL3-205	ENST00000380692	PYY3	Q5JQD4	70 aa		5.62	□□□□□ -1.51
MSL3-205	ENST00000380692	COX8A	P10176	69 aa		5.61	□□□□□ -1.51
MSL3-205	ENST00000380692	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.61	□□□□□ -1.51
MSL3-205	ENST00000380692	SPATA45	Q537H7	98 aa		5.61	□□□□□ -1.51
MSL3-205	ENST00000380692	SPINK6	Q6UWN8	80 aa		5.61	□□□□□ -1.51
MSL3-205	ENST00000380692		Q6ZVH6	145 aa		5.61	□□□□□ -1.51
MSL3-205	ENST00000380692	COPS9	Q8WXC6	57 aa		5.61	□□□□□ -1.51
MSL3-205	ENST00000380692	C14orf144	Q96I85	54 aa		5.61	□□□□□ -1.51
MSL3-205	ENST00000380692	SPANXD	Q9BXN6	97 aa		5.61	□□□□□ -1.51
MSL3-205	ENST00000380692	SPANXC	Q9NY87	97 aa		5.61	□□□□□ -1.51
MSL3-205	ENST00000380692	TRBV10-2	A0A0K0K1G8	114 aa		5.6	□□□□□ -1.51
MSL3-205	ENST00000380692	BCE1	O60756	84 aa		5.6	□□□□□ -1.51
MSL3-205	ENST00000380692	IFITM1	P13164	125 aa		5.6	□□□□□ -1.51
MSL3-205	ENST00000380692	S100A7L2	Q5SY68	101 aa		5.6	□□□□□ -1.51
MSL3-205	ENST00000380692	MUSTN1	Q8IVN3	82 aa		5.6	□□□□□ -1.51
MSL3-205	ENST00000380692	SPANXB1	Q9NS25	103 aa	Predicted RBP	5.6	□□□□□ -1.51
MSL3-205	ENST00000380692	DLEU1	O43261	78 aa		5.59	□□□□□ -1.51
MSL3-205	ENST00000380692	DDT	P30046	118 aa		5.59	□□□□□ -1.51
MSL3-205	ENST00000380692	S100A12	P80511	92 aa		5.59	□□□□□ -1.51
MSL3-205	ENST00000380692	REG3G	Q6UW15	175 aa		5.59	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms