RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 FAM19A1Q7Z5A9 133 aa14.66□□□□□ -0.06
TNFRSF4-201ENST00000379236 LEPROTL1O95214 131 aa14.64□□□□□ -0.07
TNFRSF4-201ENST00000379236 TYMSOSQ8TAI1 123 aa14.64□□□□□ -0.07
TNFRSF4-201ENST00000379236 TMEM126AQ9H061 195 aa14.64□□□□□ -0.07
TNFRSF4-201ENST00000379236 KRTAP13-1Q8IUC0 172 aa14.63□□□□□ -0.07
TNFRSF4-201ENST00000379236 TMEM238C9JI98 176 aa14.62□□□□□ -0.07
TNFRSF4-201ENST00000379236 PRLHP81277 87 aa14.62□□□□□ -0.07
TNFRSF4-201ENST00000379236 A0A087X002 238 aa14.61□□□□□ -0.07
TNFRSF4-201ENST00000379236 SERF1AO75920 110 aa14.61□□□□□ -0.07
TNFRSF4-201ENST00000379236 SMIM13P0DJ93 91 aa14.61□□□□□ -0.07
TNFRSF4-201ENST00000379236 HERV-K104P63124 156 aa14.61□□□□□ -0.07
TNFRSF4-201ENST00000379236 PRR4Q16378 134 aa14.6□□□□□ -0.07
TNFRSF4-201ENST00000379236 LINC00587B1AMM8 73 aa14.59□□□□□ -0.07
TNFRSF4-201ENST00000379236 SLC7A5P1Q8MH63 180 aa14.59□□□□□ -0.07
TNFRSF4-201ENST00000379236 Q8NDZ9 215 aa14.59□□□□□ -0.07
TNFRSF4-201ENST00000379236 TSPAN13O95857 204 aa14.58□□□□□ -0.08
TNFRSF4-201ENST00000379236 ANAPC11Q9NYG5 84 aa14.58□□□□□ -0.08
TNFRSF4-201ENST00000379236 NDUFA12Q9UI09 145 aa14.58□□□□□ -0.08
TNFRSF4-201ENST00000379236 HSPB8Q9UJY1 196 aa14.58□□□□□ -0.08
TNFRSF4-201ENST00000379236 MYMXA0A1B0GTQ4 84 aa14.57□□□□□ -0.08
TNFRSF4-201ENST00000379236 M0R378 163 aa14.57□□□□□ -0.08
TNFRSF4-201ENST00000379236 MAP1LC3CQ9BXW4 147 aa14.57□□□□□ -0.08
TNFRSF4-201ENST00000379236 PLNP26678 52 aa14.56□□□□□ -0.08
TNFRSF4-201ENST00000379236 BOD1L2Q8IYS8 172 aa14.56□□□□□ -0.08
TNFRSF4-201ENST00000379236 LPAP08519 4548 aa14.55□□□□□ -0.08
TNFRSF4-201ENST00000379236 FAM229BQ4G0N7 80 aa14.55□□□□□ -0.08
TNFRSF4-201ENST00000379236 MIR7-3HGQ8N6C7 128 aa14.55□□□□□ -0.08
TNFRSF4-201ENST00000379236 RNF213Q63HN8 5207 aa14.55□□□□□ -0.08
TNFRSF4-201ENST00000379236 FABP4P15090 132 aa14.54□□□□□ -0.08
TNFRSF4-201ENST00000379236 HERVK_113P61574 105 aa14.53□□□□□ -0.08
TNFRSF4-201ENST00000379236 IGKV2D-26A0A0A0MRZ7 120 aa14.52□□□□□ -0.09
TNFRSF4-201ENST00000379236 NCR3O14931 201 aa14.52□□□□□ -0.09
TNFRSF4-201ENST00000379236 LINC00310P59036 64 aa14.52□□□□□ -0.09
TNFRSF4-201ENST00000379236 PLEKHB2Q96CS7 222 aa14.52□□□□□ -0.09
TNFRSF4-201ENST00000379236 HIGD2AQ9BW72 106 aa14.52□□□□□ -0.09
TNFRSF4-201ENST00000379236 LEPROTO15243 131 aa14.51□□□□□ -0.09
TNFRSF4-201ENST00000379236 DPM2O94777 84 aa14.51□□□□□ -0.09
TNFRSF4-201ENST00000379236 COLCA2A8K830 154 aa14.49□□□□□ -0.09
TNFRSF4-201ENST00000379236 PRYO14603 147 aa14.48□□□□□ -0.09
TNFRSF4-201ENST00000379236 S100A12P80511 92 aa14.48□□□□□ -0.09
TNFRSF4-201ENST00000379236 KRTAP13-2Q52LG2 175 aa14.48□□□□□ -0.09
TNFRSF4-201ENST00000379236 IGKCP01834 107 aa14.47□□□□□ -0.09
TNFRSF4-201ENST00000379236 PMCHL2Q9BQD1 86 aa14.47□□□□□ -0.09
TNFRSF4-201ENST00000379236 J3QQQ9 107 aa14.46□□□□□ -0.09
TNFRSF4-201ENST00000379236 LGALS3P17931 250 aaKnown RBP14.46□□□□□ -0.09
TNFRSF4-201ENST00000379236 TSPEAR-AS2P59090 65 aa14.46□□□□□ -0.09
TNFRSF4-201ENST00000379236 LINC00304Q8N9R0 145 aa14.46□□□□□ -0.09
TNFRSF4-201ENST00000379236 NMUP48645 174 aa14.44□□□□□ -0.1
TNFRSF4-201ENST00000379236 MIEN1Q9BRT3 115 aa14.44□□□□□ -0.1
TNFRSF4-201ENST00000379236 ETDCA0A1B0GVM5 59 aa14.43□□□□□ -0.1
TNFRSF4-201ENST00000379236 ZNF706Q9Y5V0 76 aaPredicted RBP14.43□□□□□ -0.1
TNFRSF4-201ENST00000379236 DAND5Q8N907 189 aa14.42□□□□□ -0.1
TNFRSF4-201ENST00000379236 LINC00337Q8N6G1 96 aa14.41□□□□□ -0.1
TNFRSF4-201ENST00000379236 KCNQ1DNQ9H478 68 aa14.4□□□□□ -0.1
TNFRSF4-201ENST00000379236 TRBV10-3A0A0K0K1G6 114 aa14.39□□□□□ -0.11
TNFRSF4-201ENST00000379236 SPRR4Q96PI1 79 aa14.38□□□□□ -0.11
TNFRSF4-201ENST00000379236 DDTP30046 118 aa14.35□□□□□ -0.11
TNFRSF4-201ENST00000379236 SPRR1AP35321 89 aa14.35□□□□□ -0.11
TNFRSF4-201ENST00000379236 C3orf22Q8N5N4 141 aa14.35□□□□□ -0.11
TNFRSF4-201ENST00000379236 LOC107984156A0A0G2JMH3 177 aa14.34□□□□□ -0.11
TNFRSF4-201ENST00000379236 TRBV10-2A0A0K0K1G8 114 aa14.34□□□□□ -0.11
TNFRSF4-201ENST00000379236 ARL17AQ8IVW1 177 aa14.34□□□□□ -0.11
TNFRSF4-201ENST00000379236 SPANXB1Q9NS25 103 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF4-201ENST00000379236 S100A7L2Q5SY68 101 aa14.33□□□□□ -0.12
TNFRSF4-201ENST00000379236 SMCR5Q8TEV8 140 aa14.33□□□□□ -0.12
TNFRSF4-201ENST00000379236 HIST1H2BKO60814 126 aa14.32□□□□□ -0.12
TNFRSF4-201ENST00000379236 HIST1H2BJP06899 126 aa14.32□□□□□ -0.12
TNFRSF4-201ENST00000379236 HIST1H2BOP23527 126 aa14.32□□□□□ -0.12
TNFRSF4-201ENST00000379236 HIST1H2BBP33778 126 aa14.32□□□□□ -0.12
TNFRSF4-201ENST00000379236 HIST1H2BDP58876 126 aa14.32□□□□□ -0.12
TNFRSF4-201ENST00000379236 HIST1H2BCP62807 126 aa14.32□□□□□ -0.12
TNFRSF4-201ENST00000379236 HIST2H2BEQ16778 126 aa14.32□□□□□ -0.12
TNFRSF4-201ENST00000379236 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF4-201ENST00000379236 HIST1H2BHQ93079 126 aa14.32□□□□□ -0.12
TNFRSF4-201ENST00000379236 HIST1H2BNQ99877 126 aa14.32□□□□□ -0.12
TNFRSF4-201ENST00000379236 HIST1H2BMQ99879 126 aa14.32□□□□□ -0.12
TNFRSF4-201ENST00000379236 RETNLBQ9BQ08 111 aa14.32□□□□□ -0.12
TNFRSF4-201ENST00000379236 E9PLD3 99 aa14.31□□□□□ -0.12
TNFRSF4-201ENST00000379236 SYS1-DBNDD2H3BUS1 97 aa14.31□□□□□ -0.12
TNFRSF4-201ENST00000379236 NPC2P61916 151 aa14.3□□□□□ -0.12
TNFRSF4-201ENST00000379236 CTAG1AP78358 180 aa14.3□□□□□ -0.12
TNFRSF4-201ENST00000379236 KRTAP4-16G5E9R7 235 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF4-201ENST00000379236 NDUFC2O95298 119 aa14.29□□□□□ -0.12
TNFRSF4-201ENST00000379236 C4orf48Q5BLP8 95 aa14.29□□□□□ -0.12
TNFRSF4-201ENST00000379236 PPDPFQ9H3Y8 114 aa14.29□□□□□ -0.12
TNFRSF4-201ENST00000379236 A0A0J9YXY3 114 aa14.28□□□□□ -0.12
TNFRSF4-201ENST00000379236 SPAG11AQ6PDA7 123 aa14.27□□□□□ -0.13
TNFRSF4-201ENST00000379236 B5MCH6 92 aa14.26□□□□□ -0.13
TNFRSF4-201ENST00000379236 PET117Q6UWS5 81 aa14.24□□□□□ -0.13
TNFRSF4-201ENST00000379236 TRAV23DV6A0A075B6W5 121 aa14.23□□□□□ -0.13
TNFRSF4-201ENST00000379236 GAGE2AQ6NT46 116 aa14.23□□□□□ -0.13
TNFRSF4-201ENST00000379236 ADAMTSL4-AS1Q5T5F5 129 aa14.22□□□□□ -0.13
TNFRSF4-201ENST00000379236 LINC01545Q5VT33 79 aa14.22□□□□□ -0.13
TNFRSF4-201ENST00000379236 IGLV6-57P01721 117 aa14.21□□□□□ -0.13
TNFRSF4-201ENST00000379236 JOSD1Q15040 202 aaPredicted RBP14.21□□□□□ -0.13
TNFRSF4-201ENST00000379236 Q6ZRX8 168 aa14.21□□□□□ -0.13
TNFRSF4-201ENST00000379236 Q8NBF4 154 aa14.21□□□□□ -0.13
TNFRSF4-201ENST00000379236 CBY1Q9Y3M2 126 aa14.21□□□□□ -0.13
TNFRSF4-201ENST00000379236 SOSTDC1Q6X4U4 206 aa14.2□□□□□ -0.14
TNFRSF4-201ENST00000379236 IGLV7-46A0A075B6I9 117 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms