RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 C2orf66Q6UXQ4 117 aa10.33□□□□□ -0.76
PDLIM4-202ENST00000379018 FAM19A2Q8N3H0 131 aa10.33□□□□□ -0.76
PDLIM4-202ENST00000379018 CYSLTR1Q9Y271 337 aa10.33□□□□□ -0.76
PDLIM4-202ENST00000379018 MUC17Q685J3 4493 aa10.32□□□□□ -0.76
PDLIM4-202ENST00000379018 K7EMI3 77 aa10.32□□□□□ -0.76
PDLIM4-202ENST00000379018 KRTDAPP60985 99 aa10.32□□□□□ -0.76
PDLIM4-202ENST00000379018 VAMP8Q9BV40 100 aa10.32□□□□□ -0.76
PDLIM4-202ENST00000379018 NXT2Q9NPJ8 142 aaKnown RBP10.32□□□□□ -0.76
PDLIM4-202ENST00000379018 F8VRH5 84 aa10.31□□□□□ -0.76
PDLIM4-202ENST00000379018 FA2HQ7L5A8 372 aa10.31□□□□□ -0.76
PDLIM4-202ENST00000379018 AMELXQ99217 191 aa10.31□□□□□ -0.76
PDLIM4-202ENST00000379018 MAP1LC3AQ9H492 121 aa10.31□□□□□ -0.76
PDLIM4-202ENST00000379018 SYS1-DBNDD2H3BUS1 97 aa10.3□□□□□ -0.76
PDLIM4-202ENST00000379018 TPRXLQ17RH7 258 aa10.3□□□□□ -0.76
PDLIM4-202ENST00000379018 CDKN2A-AS1Q9UH64 79 aa10.3□□□□□ -0.76
PDLIM4-202ENST00000379018 IGKV2D-26A0A0A0MRZ7 120 aa10.29□□□□□ -0.76
PDLIM4-202ENST00000379018 C14orf144Q96I85 54 aa10.29□□□□□ -0.76
PDLIM4-202ENST00000379018 MAP1LC3CQ9BXW4 147 aa10.29□□□□□ -0.76
PDLIM4-202ENST00000379018 GEMIN7Q9H840 131 aaKnown RBP10.29□□□□□ -0.76
PDLIM4-202ENST00000379018 A0A096LNJ9 63 aa10.28□□□□□ -0.76
PDLIM4-202ENST00000379018 HBDP02042 147 aa10.28□□□□□ -0.76
PDLIM4-202ENST00000379018 LINC01545Q5VT33 79 aa10.28□□□□□ -0.76
PDLIM4-202ENST00000379018 NKAPP1Q8N9T2 125 aa10.28□□□□□ -0.76
PDLIM4-202ENST00000379018 MIEN1Q9BRT3 115 aa10.28□□□□□ -0.76
PDLIM4-202ENST00000379018 HERVK_113P63121 156 aa10.27□□□□□ -0.77
PDLIM4-202ENST00000379018 Q8N8P6 123 aa10.27□□□□□ -0.77
PDLIM4-202ENST00000379018 IGKV2-28A0A075B6P5 120 aa10.26□□□□□ -0.77
PDLIM4-202ENST00000379018 IGKV2D-28P01615 120 aa10.26□□□□□ -0.77
PDLIM4-202ENST00000379018 FAM229BQ4G0N7 80 aa10.26□□□□□ -0.77
PDLIM4-202ENST00000379018 PRO1933Q9H354 126 aa10.26□□□□□ -0.77
PDLIM4-202ENST00000379018 LINC01549A6NIU2 74 aa10.25□□□□□ -0.77
PDLIM4-202ENST00000379018 CXCL5P42830 114 aa10.25□□□□□ -0.77
PDLIM4-202ENST00000379018 PRLHP81277 87 aa10.25□□□□□ -0.77
PDLIM4-202ENST00000379018 KRTAP13-1Q8IUC0 172 aa10.25□□□□□ -0.77
PDLIM4-202ENST00000379018 PPDPFQ9H3Y8 114 aa10.25□□□□□ -0.77
PDLIM4-202ENST00000379018 SEC11AP67812 179 aa10.24□□□□□ -0.77
PDLIM4-202ENST00000379018 SPATA45Q537H7 98 aa10.24□□□□□ -0.77
PDLIM4-202ENST00000379018 ORMDL2Q53FV1 153 aa10.24□□□□□ -0.77
PDLIM4-202ENST00000379018 UQCR10Q9UDW1 63 aa10.24□□□□□ -0.77
PDLIM4-202ENST00000379018 IGIPA6NJ69 53 aa10.23□□□□□ -0.77
PDLIM4-202ENST00000379018 IGLC3P0DOY3 106 aa10.23□□□□□ -0.77
PDLIM4-202ENST00000379018 FAM19A3Q7Z5A8 133 aa10.23□□□□□ -0.77
PDLIM4-202ENST00000379018 COX7B2Q8TF08 81 aa10.23□□□□□ -0.77
PDLIM4-202ENST00000379018 PAM16Q9Y3D7 125 aa10.23□□□□□ -0.77
PDLIM4-202ENST00000379018 FAM19A1Q7Z5A9 133 aa10.22□□□□□ -0.77
PDLIM4-202ENST00000379018 SMIM1B2RUZ4 78 aa10.21□□□□□ -0.77
PDLIM4-202ENST00000379018 C3orf22Q8N5N4 141 aa10.21□□□□□ -0.77
PDLIM4-202ENST00000379018 PAPPA-AS1Q5QFB9 102 aa10.2□□□□□ -0.78
PDLIM4-202ENST00000379018 IGLV5-37A0A075B6J1 123 aa10.19□□□□□ -0.78
PDLIM4-202ENST00000379018 NPSP0C0P6 89 aa10.19□□□□□ -0.78
PDLIM4-202ENST00000379018 G0S2P27469 103 aa10.19□□□□□ -0.78
PDLIM4-202ENST00000379018 TMEM238C9JI98 176 aa10.18□□□□□ -0.78
PDLIM4-202ENST00000379018 M0R143 59 aa10.18□□□□□ -0.78
PDLIM4-202ENST00000379018 ATP5LO75964 103 aa10.18□□□□□ -0.78
PDLIM4-202ENST00000379018 SPINK8P0C7L1 97 aa10.18□□□□□ -0.78
PDLIM4-202ENST00000379018 IFI27L1Q96BM0 104 aa10.18□□□□□ -0.78
PDLIM4-202ENST00000379018 HSBP1L1C9JCN9 74 aa10.17□□□□□ -0.78
PDLIM4-202ENST00000379018 PMCHL2Q9BQD1 86 aa10.17□□□□□ -0.78
PDLIM4-202ENST00000379018 PFN2P35080 140 aa10.16□□□□□ -0.78
PDLIM4-202ENST00000379018 LINC01547P58512 204 aaPredicted RBP10.16□□□□□ -0.78
PDLIM4-202ENST00000379018 LINC00337Q8N6G1 96 aa10.16□□□□□ -0.78
PDLIM4-202ENST00000379018 TIMM17AQ99595 171 aa10.16□□□□□ -0.78
PDLIM4-202ENST00000379018 TRAV12-1A0A0B4J245 112 aa10.15□□□□□ -0.78
PDLIM4-202ENST00000379018 SCGB3A1Q96QR1 104 aa10.15□□□□□ -0.78
PDLIM4-202ENST00000379018 TMEM126AQ9H061 195 aa10.15□□□□□ -0.78
PDLIM4-202ENST00000379018 TOMM6Q96B49 74 aa10.14□□□□□ -0.79
PDLIM4-202ENST00000379018 SNHG12Q9BXW3 62 aa10.14□□□□□ -0.79
PDLIM4-202ENST00000379018 TINCRA0A1B0GVN0 87 aa10.13□□□□□ -0.79
PDLIM4-202ENST00000379018 DLEU1O43261 78 aa10.13□□□□□ -0.79
PDLIM4-202ENST00000379018 HIGD2AQ9BW72 106 aa10.13□□□□□ -0.79
PDLIM4-202ENST00000379018 PLEKHB2Q96CS7 222 aa10.12□□□□□ -0.79
PDLIM4-202ENST00000379018 COX8AP10176 69 aa10.11□□□□□ -0.79
PDLIM4-202ENST00000379018 M0R378 163 aa10.1□□□□□ -0.79
PDLIM4-202ENST00000379018 VPREB1P12018 145 aa10.1□□□□□ -0.79
PDLIM4-202ENST00000379018 C4orf48Q5BLP8 95 aa10.1□□□□□ -0.79
PDLIM4-202ENST00000379018 SLC25A34Q6PIV7 304 aa10.1□□□□□ -0.79
PDLIM4-202ENST00000379018 ERASQ7Z444 233 aa10.1□□□□□ -0.79
PDLIM4-202ENST00000379018 ATOH7Q8N100 152 aa10.1□□□□□ -0.79
PDLIM4-202ENST00000379018 IGLV5-45A0A087WSX0 123 aa10.09□□□□□ -0.79
PDLIM4-202ENST00000379018 FSIP2Q5CZC0 6907 aa10.08□□□□□ -0.8
PDLIM4-202ENST00000379018 PLNP26678 52 aa10.08□□□□□ -0.8
PDLIM4-202ENST00000379018 LCE2DQ5TA82 110 aaPredicted RBP10.08□□□□□ -0.8
PDLIM4-202ENST00000379018 SPAG11AQ6PDA7 123 aa10.08□□□□□ -0.8
PDLIM4-202ENST00000379018 FP248Q71RG6 208 aaPredicted RBP10.08□□□□□ -0.8
PDLIM4-202ENST00000379018 DAND5Q8N907 189 aa10.08□□□□□ -0.8
PDLIM4-202ENST00000379018 KRTAP4-1Q9BYQ7 146 aa10.08□□□□□ -0.8
PDLIM4-202ENST00000379018 SND1-IT1Q9HBX3 110 aa10.08□□□□□ -0.8
PDLIM4-202ENST00000379018 KRTAP13-3Q3SY46 172 aa10.07□□□□□ -0.8
PDLIM4-202ENST00000379018 ASB16-AS1Q495Z4 193 aa10.07□□□□□ -0.8
PDLIM4-202ENST00000379018 CST9LQ9H4G1 147 aa10.07□□□□□ -0.8
PDLIM4-202ENST00000379018 CRCT1Q9UGL9 99 aa10.07□□□□□ -0.8
PDLIM4-202ENST00000379018 H3BRM9 83 aa10.06□□□□□ -0.8
PDLIM4-202ENST00000379018 DPM2O94777 84 aa10.06□□□□□ -0.8
PDLIM4-202ENST00000379018 COL5A1-AS1Q5SY13 56 aa10.06□□□□□ -0.8
PDLIM4-202ENST00000379018 BOD1L2Q8IYS8 172 aa10.06□□□□□ -0.8
PDLIM4-202ENST00000379018 ZNF625Q96I27 306 aaPredicted RBP10.06□□□□□ -0.8
PDLIM4-202ENST00000379018 IGKCP01834 107 aa10.05□□□□□ -0.8
PDLIM4-202ENST00000379018 RPL24P83731 157 aaKnown RBP10.05□□□□□ -0.8
PDLIM4-202ENST00000379018 Q8NBF4 154 aa10.05□□□□□ -0.8
PDLIM4-202ENST00000379018 Q8NDZ9 215 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms