RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 IGKV2-24A0A0C4DH68 120 aa8.88□□□□□ -0.99
UPK1A-202ENST00000379013 IFITM1P13164 125 aa8.88□□□□□ -0.99
UPK1A-202ENST00000379013 MIR7-3HGQ8N6C7 128 aa8.88□□□□□ -0.99
UPK1A-202ENST00000379013 DPH3Q96FX2 82 aa8.88□□□□□ -0.99
UPK1A-202ENST00000379013 SPANXDQ9BXN6 97 aa8.88□□□□□ -0.99
UPK1A-202ENST00000379013 SPANXB1Q9NS25 103 aaPredicted RBP8.88□□□□□ -0.99
UPK1A-202ENST00000379013 SPANXCQ9NY87 97 aa8.88□□□□□ -0.99
UPK1A-202ENST00000379013 HIGD1BQ9P298 99 aa8.88□□□□□ -0.99
UPK1A-202ENST00000379013 A0A096LNI7 61 aa8.87□□□□□ -0.99
UPK1A-202ENST00000379013 SMR3BP02814 79 aaPredicted RBP8.87□□□□□ -0.99
UPK1A-202ENST00000379013 RPL24P83731 157 aaKnown RBP8.87□□□□□ -0.99
UPK1A-202ENST00000379013 SRSF9Q13242 221 aaKnown RBP eCLIP8.87□□□□□ -0.99
UPK1A-202ENST00000379013 PPDPFQ9H3Y8 114 aa8.87□□□□□ -0.99
UPK1A-202ENST00000379013 SND1-IT1Q9HBX3 110 aa8.87□□□□□ -0.99
UPK1A-202ENST00000379013 A0A0U1RRA0 63 aa8.86□□□□□ -0.99
UPK1A-202ENST00000379013 LINC01620Q4KN68 170 aa8.86□□□□□ -0.99
UPK1A-202ENST00000379013 SPACA4Q8TDM5 124 aa8.86□□□□□ -0.99
UPK1A-202ENST00000379013 Q6ZSA8 131 aa8.84□□□□□ -0.99
UPK1A-202ENST00000379013 LINC00518Q8N0U6 118 aa8.84□□□□□ -0.99
UPK1A-202ENST00000379013 HIST1H4GQ99525 98 aa8.84□□□□□ -0.99
UPK1A-202ENST00000379013 XAGE1AQ9HD64 81 aa8.84□□□□□ -0.99
UPK1A-202ENST00000379013 PLA2G2DQ9UNK4 145 aa8.84□□□□□ -0.99
UPK1A-202ENST00000379013 LRP1Q07954 4544 aaKnown RBP8.84□□□□□ -0.99
UPK1A-202ENST00000379013 DMBT1Q9UGM3 2413 aaPredicted RBP8.83□□□□□ -1
UPK1A-202ENST00000379013 LOC107984156A0A0G2JMH3 177 aa8.83□□□□□ -1
UPK1A-202ENST00000379013 TAL2Q16559 108 aa8.83□□□□□ -1
UPK1A-202ENST00000379013 ARL17AQ8IVW1 177 aa8.83□□□□□ -1
UPK1A-202ENST00000379013 NKAPP1Q8N9T2 125 aa8.83□□□□□ -1
UPK1A-202ENST00000379013 LITAFQ99732 161 aa8.83□□□□□ -1
UPK1A-202ENST00000379013 EPM2AB3EWF7 344 aa8.82□□□□□ -1
UPK1A-202ENST00000379013 NDUFC2O95298 119 aa8.82□□□□□ -1
UPK1A-202ENST00000379013 HNRNPA3P51991 378 aaKnown RBP8.82□□□□□ -1
UPK1A-202ENST00000379013 DAND5Q8N907 189 aa8.82□□□□□ -1
UPK1A-202ENST00000379013 LINC00308Q8TCZ7 52 aa8.82□□□□□ -1
UPK1A-202ENST00000379013 TMEM238LA0A1B0GVL6 79 aa8.81□□□□□ -1
UPK1A-202ENST00000379013 A6NJY4 79 aa8.81□□□□□ -1
UPK1A-202ENST00000379013 CHTF8P0CG12 524 aa8.81□□□□□ -1
UPK1A-202ENST00000379013 C9orf129Q5T035 196 aaKnown RBP8.81□□□□□ -1
UPK1A-202ENST00000379013 ADAMTSL4-AS1Q5T5F5 129 aa8.81□□□□□ -1
UPK1A-202ENST00000379013 TP73-AS1Q9UF72 201 aa8.81□□□□□ -1
UPK1A-202ENST00000379013 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.81□□□□□ -1
UPK1A-202ENST00000379013 LBHQ53QV2 105 aaPredicted RBP8.8□□□□□ -1
UPK1A-202ENST00000379013 CBY1Q9Y3M2 126 aa8.8□□□□□ -1
UPK1A-202ENST00000379013 FAT3Q8TDW7 4589 aa8.8□□□□□ -1
UPK1A-202ENST00000379013 A0A087WYN8 130 aa8.79□□□□□ -1
UPK1A-202ENST00000379013 Q5VSD8 79 aa8.79□□□□□ -1
UPK1A-202ENST00000379013 FAM19A5Q7Z5A7 132 aaPredicted RBP8.79□□□□□ -1
UPK1A-202ENST00000379013 PLAC8Q9NZF1 115 aa8.79□□□□□ -1
UPK1A-202ENST00000379013 PKHD1L1Q86WI1 4243 aa8.79□□□□□ -1
UPK1A-202ENST00000379013 IGLV5-37A0A075B6J1 123 aa8.78□□□□□ -1
UPK1A-202ENST00000379013 TRBV10-2A0A0K0K1G8 114 aa8.78□□□□□ -1
UPK1A-202ENST00000379013 M0QXV9 152 aa8.78□□□□□ -1
UPK1A-202ENST00000379013 NPC2P61916 151 aa8.78□□□□□ -1
UPK1A-202ENST00000379013 HSD52Q0P140 79 aa8.78□□□□□ -1
UPK1A-202ENST00000379013 C2orf91Q6ZV80 131 aa8.78□□□□□ -1
UPK1A-202ENST00000379013 PRO1933Q9H354 126 aa8.78□□□□□ -1
UPK1A-202ENST00000379013 C7orf33Q8WU49 177 aa8.77□□□□□ -1.01
UPK1A-202ENST00000379013 M0R378 163 aa8.76□□□□□ -1.01
UPK1A-202ENST00000379013 INAFM2P0DMQ5 153 aa8.76□□□□□ -1.01
UPK1A-202ENST00000379013 SCXQ7RTU7 201 aa8.76□□□□□ -1.01
UPK1A-202ENST00000379013 MRPL55Q7Z7F7 128 aaKnown RBP8.76□□□□□ -1.01
UPK1A-202ENST00000379013 MUSTN1Q8IVN3 82 aa8.76□□□□□ -1.01
UPK1A-202ENST00000379013 M0R143 59 aa8.75□□□□□ -1.01
UPK1A-202ENST00000379013 VPREB1P12018 145 aa8.75□□□□□ -1.01
UPK1A-202ENST00000379013 TRAV13-2A0A0B4J235 113 aa8.74□□□□□ -1.01
UPK1A-202ENST00000379013 FAM168BA1KXE4 195 aa8.74□□□□□ -1.01
UPK1A-202ENST00000379013 PANO1I0J062 215 aa8.74□□□□□ -1.01
UPK1A-202ENST00000379013 S100A7L2Q5SY68 101 aa8.74□□□□□ -1.01
UPK1A-202ENST00000379013 SOSTDC1Q6X4U4 206 aa8.74□□□□□ -1.01
UPK1A-202ENST00000379013 CEND1Q8N111 149 aa8.74□□□□□ -1.01
UPK1A-202ENST00000379013 CIRBP-AS1Q8TBR5 109 aa8.74□□□□□ -1.01
UPK1A-202ENST00000379013 C22orf24Q9Y442 160 aa8.74□□□□□ -1.01
UPK1A-202ENST00000379013 A0A1W2PNN7 141 aa8.73□□□□□ -1.01
UPK1A-202ENST00000379013 UBE2BP63146 152 aa8.73□□□□□ -1.01
UPK1A-202ENST00000379013 SERTAD4-AS1Q5TG53 156 aa8.73□□□□□ -1.01
UPK1A-202ENST00000379013 NCR3O14931 201 aa8.72□□□□□ -1.01
UPK1A-202ENST00000379013 TMEM126AQ9H061 195 aa8.72□□□□□ -1.01
UPK1A-202ENST00000379013 A4D1N5 150 aa8.71□□□□□ -1.02
UPK1A-202ENST00000379013 DDTP30046 118 aa8.71□□□□□ -1.02
UPK1A-202ENST00000379013 KRTAP10-4P60372 401 aaPredicted RBP8.69□□□□□ -1.02
UPK1A-202ENST00000379013 OR13C6PQ8NH95 151 aa8.69□□□□□ -1.02
UPK1A-202ENST00000379013 RAB37Q96AX2 223 aa8.69□□□□□ -1.02
UPK1A-202ENST00000379013 A0A0B4J2C4 111 aa8.68□□□□□ -1.02
UPK1A-202ENST00000379013 A6NDN8 102 aa8.68□□□□□ -1.02
UPK1A-202ENST00000379013 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
UPK1A-202ENST00000379013 EIF4EBP3O60516 100 aaPredicted RBP8.68□□□□□ -1.02
UPK1A-202ENST00000379013 CTAG1AP78358 180 aa8.68□□□□□ -1.02
UPK1A-202ENST00000379013 PHF5AQ7RTV0 110 aaKnown RBP8.68□□□□□ -1.02
UPK1A-202ENST00000379013 LINC00167Q96N53 147 aa8.68□□□□□ -1.02
UPK1A-202ENST00000379013 PRYO14603 147 aa8.67□□□□□ -1.02
UPK1A-202ENST00000379013 KRTAP7-1Q8IUC3 87 aa8.67□□□□□ -1.02
UPK1A-202ENST00000379013 IGLV1-50A0A075B6I6 118 aa8.66□□□□□ -1.02
UPK1A-202ENST00000379013 GAGE10A6NGK3 116 aa8.66□□□□□ -1.02
UPK1A-202ENST00000379013 IGLV6-57P01721 117 aa8.66□□□□□ -1.02
UPK1A-202ENST00000379013 HINT1P49773 126 aaPredicted RBP8.66□□□□□ -1.02
UPK1A-202ENST00000379013 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
UPK1A-202ENST00000379013 IGKV2-28A0A075B6P5 120 aa8.65□□□□□ -1.02
UPK1A-202ENST00000379013 TRBV10-3A0A0K0K1G6 114 aa8.65□□□□□ -1.02
UPK1A-202ENST00000379013 IGKV2D-28P01615 120 aa8.65□□□□□ -1.02
UPK1A-202ENST00000379013 PRR3P79522 188 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms