RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 ESM1Q9NQ30 184 aa5.59□□□□□ -1.52
PTPRR-203ENST00000378778 CREBBPQ92793 2442 aa5.59□□□□□ -1.52
PTPRR-203ENST00000378778 TRAV10A0A0B4J240 114 aa5.58□□□□□ -1.52
PTPRR-203ENST00000378778 AKAP6Q13023 2319 aa5.58□□□□□ -1.52
PTPRR-203ENST00000378778 REG3AQ06141 175 aa5.58□□□□□ -1.52
PTPRR-203ENST00000378778 NREPQ16612 68 aa5.58□□□□□ -1.52
PTPRR-203ENST00000378778 Q6ZQY7 126 aa5.58□□□□□ -1.52
PTPRR-203ENST00000378778 CSMD1Q96PZ7 3565 aa5.57□□□□□ -1.52
PTPRR-203ENST00000378778 RPL35AP18077 110 aaKnown RBP5.57□□□□□ -1.52
PTPRR-203ENST00000378778 PRR3P79522 188 aaKnown RBP5.57□□□□□ -1.52
PTPRR-203ENST00000378778 CR1P17927 2039 aa5.57□□□□□ -1.52
PTPRR-203ENST00000378778 RNASE1P07998 156 aaKnown RBP5.57□□□□□ -1.52
PTPRR-203ENST00000378778 ELOF1P60002 83 aaKnown RBP5.57□□□□□ -1.52
PTPRR-203ENST00000378778 TMEM254Q8TBM7 123 aa5.57□□□□□ -1.52
PTPRR-203ENST00000378778 F8WDY8 70 aa5.56□□□□□ -1.52
PTPRR-203ENST00000378778 SPAG11BQ08648 103 aa5.56□□□□□ -1.52
PTPRR-203ENST00000378778 FP248Q71RG6 208 aaPredicted RBP5.56□□□□□ -1.52
PTPRR-203ENST00000378778 LINC00269Q8N2A0 174 aa5.56□□□□□ -1.52
PTPRR-203ENST00000378778 RMI2Q96E14 147 aa5.56□□□□□ -1.52
PTPRR-203ENST00000378778 CELA1Q9UNI1 258 aa5.56□□□□□ -1.52
PTPRR-203ENST00000378778 ITPR3Q14573 2671 aa5.56□□□□□ -1.52
PTPRR-203ENST00000378778 BPY2O14599 106 aa5.56□□□□□ -1.52
PTPRR-203ENST00000378778 LINC00336Q6ZUF6 198 aa5.55□□□□□ -1.52
PTPRR-203ENST00000378778 ZNF73O43830 326 aaPredicted RBP5.55□□□□□ -1.52
PTPRR-203ENST00000378778 A0A0U1RQV1 116 aa5.54□□□□□ -1.52
PTPRR-203ENST00000378778 DNAJC9-AS1A6NH13 148 aa5.54□□□□□ -1.52
PTPRR-203ENST00000378778 ANGP03950 147 aaKnown RBP5.54□□□□□ -1.52
PTPRR-203ENST00000378778 DEFB113Q30KQ7 82 aa5.54□□□□□ -1.52
PTPRR-203ENST00000378778 SNURFQ9Y675 71 aa5.54□□□□□ -1.52
PTPRR-203ENST00000378778 DEFB130BP0DP73 79 aa5.54□□□□□ -1.52
PTPRR-203ENST00000378778 DEFB130AP0DP74 79 aa5.54□□□□□ -1.52
PTPRR-203ENST00000378778 LELP1Q5T871 98 aa5.54□□□□□ -1.52
PTPRR-203ENST00000378778 PRR34Q9NV39 138 aa5.54□□□□□ -1.52
PTPRR-203ENST00000378778 CSPG4Q6UVK1 2322 aa5.53□□□□□ -1.52
PTPRR-203ENST00000378778 M0R378 163 aa5.53□□□□□ -1.52
PTPRR-203ENST00000378778 PRYO14603 147 aa5.53□□□□□ -1.52
PTPRR-203ENST00000378778 Q8NDZ9 215 aa5.53□□□□□ -1.52
PTPRR-203ENST00000378778 LINC01006Q8NI28 216 aa5.53□□□□□ -1.52
PTPRR-203ENST00000378778 TM2D3Q9BRN9 247 aa5.53□□□□□ -1.52
PTPRR-203ENST00000378778 OCR1Q9BZK8 76 aa5.53□□□□□ -1.52
PTPRR-203ENST00000378778 FLNCQ14315 2725 aa5.52□□□□□ -1.53
PTPRR-203ENST00000378778 C2CD3Q4AC94 2353 aa5.52□□□□□ -1.53
PTPRR-203ENST00000378778 M0R2N4 97 aa5.52□□□□□ -1.53
PTPRR-203ENST00000378778 C9orf116Q5BN46 136 aaPredicted RBP5.52□□□□□ -1.53
PTPRR-203ENST00000378778 UNQ6190/PRO20217Q6UXQ8 127 aa5.52□□□□□ -1.53
PTPRR-203ENST00000378778 IGKV4-1P06312 121 aa5.51□□□□□ -1.53
PTPRR-203ENST00000378778 FUSP35637 526 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTPRR-203ENST00000378778 EGFEM1PQ0D2K5 195 aa5.51□□□□□ -1.53
PTPRR-203ENST00000378778 ESRGQ1W209 222 aa5.51□□□□□ -1.53
PTPRR-203ENST00000378778 NBASA2RRP1 2371 aa5.51□□□□□ -1.53
PTPRR-203ENST00000378778 LCE6AA0A183 80 aa5.51□□□□□ -1.53
PTPRR-203ENST00000378778 CLPSL2Q6UWE3 100 aa5.51□□□□□ -1.53
PTPRR-203ENST00000378778 UTP20O75691 2785 aaKnown RBP5.51□□□□□ -1.53
PTPRR-203ENST00000378778 LRRK2Q5S007 2527 aa5.5□□□□□ -1.53
PTPRR-203ENST00000378778 MAPK1IP1LQ8NDC0 245 aa5.5□□□□□ -1.53
PTPRR-203ENST00000378778 FBN2P35556 2912 aa5.5□□□□□ -1.53
PTPRR-203ENST00000378778 C10orf25Q5T742 122 aa5.5□□□□□ -1.53
PTPRR-203ENST00000378778 WFDC10AQ9H1F0 79 aa5.5□□□□□ -1.53
PTPRR-203ENST00000378778 VPREB1P12018 145 aa5.49□□□□□ -1.53
PTPRR-203ENST00000378778 HIGD2BQ4VC39 106 aa5.49□□□□□ -1.53
PTPRR-203ENST00000378778 POLQO75417 2590 aa5.49□□□□□ -1.53
PTPRR-203ENST00000378778 ZFHX3Q15911 3703 aa5.49□□□□□ -1.53
PTPRR-203ENST00000378778 C6orf48Q9UBA6 75 aa5.49□□□□□ -1.53
PTPRR-203ENST00000378778 CELSR1Q9NYQ6 3014 aa5.49□□□□□ -1.53
PTPRR-203ENST00000378778 USP9YO00507 2555 aaPredicted RBP5.48□□□□□ -1.53
PTPRR-203ENST00000378778 Q6ZTC4 211 aa5.48□□□□□ -1.53
PTPRR-203ENST00000378778 IGLV10-54A0A075B6I4 117 aa5.47□□□□□ -1.53
PTPRR-203ENST00000378778 IGLV5-48A0A075B6I7 105 aa5.47□□□□□ -1.53
PTPRR-203ENST00000378778 APOC4P55056 127 aa5.47□□□□□ -1.53
PTPRR-203ENST00000378778 DAD1P61803 113 aa5.47□□□□□ -1.53
PTPRR-203ENST00000378778 ITPR2Q14571 2701 aa5.47□□□□□ -1.53
PTPRR-203ENST00000378778 SERTAD4-AS1Q5TG53 156 aa5.46□□□□□ -1.54
PTPRR-203ENST00000378778 Q1T7F1 81 aa5.45□□□□□ -1.54
PTPRR-203ENST00000378778 C1orf195Q5TG92 126 aa5.45□□□□□ -1.54
PTPRR-203ENST00000378778 DHRS4-AS1Q9P1J3 65 aa5.45□□□□□ -1.54
PTPRR-203ENST00000378778 SETD2Q9BYW2 2564 aaPredicted RBP5.45□□□□□ -1.54
PTPRR-203ENST00000378778 H3BNG1 76 aa5.45□□□□□ -1.54
PTPRR-203ENST00000378778 KCNQ1DNQ9H478 68 aa5.45□□□□□ -1.54
PTPRR-203ENST00000378778 LINC00474Q9P2X8 69 aa5.45□□□□□ -1.54
PTPRR-203ENST00000378778 SCXQ7RTU7 201 aa5.44□□□□□ -1.54
PTPRR-203ENST00000378778 KRTAP1-3Q8IUG1 177 aa5.44□□□□□ -1.54
PTPRR-203ENST00000378778 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
PTPRR-203ENST00000378778 V9GYY9 64 aa5.44□□□□□ -1.54
PTPRR-203ENST00000378778 CENPEQ02224 2701 aa5.44□□□□□ -1.54
PTPRR-203ENST00000378778 SPART-AS1P0CW21 52 aa5.44□□□□□ -1.54
PTPRR-203ENST00000378778 PRR15Q8IV56 129 aa5.44□□□□□ -1.54
PTPRR-203ENST00000378778 WFDC11Q8NEX6 87 aa5.44□□□□□ -1.54
PTPRR-203ENST00000378778 CAMK2N2Q96S95 79 aa5.44□□□□□ -1.54
PTPRR-203ENST00000378778 CYP4F30PQ9H0H9 118 aa5.44□□□□□ -1.54
PTPRR-203ENST00000378778 A0A096LPF7 62 aa5.44□□□□□ -1.54
PTPRR-203ENST00000378778 hDV103S1A0JD37 113 aa5.44□□□□□ -1.54
PTPRR-203ENST00000378778 NDUFB1O75438 58 aa5.43□□□□□ -1.54
PTPRR-203ENST00000378778 ZCCHC13Q8WW36 166 aaKnown RBP5.43□□□□□ -1.54
PTPRR-203ENST00000378778 KLK12Q9UKR0 248 aa5.43□□□□□ -1.54
PTPRR-203ENST00000378778 KPRPQ5T749 579 aaPredicted RBP5.42□□□□□ -1.54
PTPRR-203ENST00000378778 A0A0A0MQY5 61 aa5.42□□□□□ -1.54
PTPRR-203ENST00000378778 ETDCA0A1B0GVM5 59 aa5.42□□□□□ -1.54
PTPRR-203ENST00000378778 SPRR4Q96PI1 79 aa5.42□□□□□ -1.54
PTPRR-203ENST00000378778 XAGE1AQ9HD64 81 aa5.42□□□□□ -1.54
PTPRR-203ENST00000378778 IGLV5-37A0A075B6J1 123 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms