RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 FAM19A5Q7Z5A7 132 aaPredicted RBP8.28□□□□□ -1.08
CKAP2-202ENST00000378034 VAMP8Q9BV40 100 aa8.28□□□□□ -1.08
CKAP2-202ENST00000378034 PLA2G2DQ9UNK4 145 aa8.28□□□□□ -1.08
CKAP2-202ENST00000378034 LGALS3P17931 250 aaKnown RBP8.27□□□□□ -1.09
CKAP2-202ENST00000378034 FAT1Q14517 4588 aa8.27□□□□□ -1.09
CKAP2-202ENST00000378034 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
CKAP2-202ENST00000378034 INAFM2P0DMQ5 153 aa8.26□□□□□ -1.09
CKAP2-202ENST00000378034 LINC00158P58513 81 aa8.26□□□□□ -1.09
CKAP2-202ENST00000378034 KRTAP7-1Q8IUC3 87 aa8.26□□□□□ -1.09
CKAP2-202ENST00000378034 VPS13BQ7Z7G8 4022 aa8.25□□□□□ -1.09
CKAP2-202ENST00000378034 SRRM2Q9UQ35 2752 aaKnown RBP8.25□□□□□ -1.09
CKAP2-202ENST00000378034 M0QXV9 152 aa8.25□□□□□ -1.09
CKAP2-202ENST00000378034 MEIG1Q5JSS6 88 aa8.25□□□□□ -1.09
CKAP2-202ENST00000378034 PHF5AQ7RTV0 110 aaKnown RBP8.25□□□□□ -1.09
CKAP2-202ENST00000378034 SND1-IT1Q9HBX3 110 aa8.25□□□□□ -1.09
CKAP2-202ENST00000378034 MIEN1Q9BRT3 115 aa8.24□□□□□ -1.09
CKAP2-202ENST00000378034 TP73-AS1Q9UF72 201 aa8.24□□□□□ -1.09
CKAP2-202ENST00000378034 PAM16Q9Y3D7 125 aa8.24□□□□□ -1.09
CKAP2-202ENST00000378034 SERTAD4-AS1Q5TG53 156 aa8.24□□□□□ -1.09
CKAP2-202ENST00000378034 IGLV5-37A0A075B6J1 123 aa8.23□□□□□ -1.09
CKAP2-202ENST00000378034 SMIM13P0DJ93 91 aa8.23□□□□□ -1.09
CKAP2-202ENST00000378034 PRR3P79522 188 aaKnown RBP8.23□□□□□ -1.09
CKAP2-202ENST00000378034 C22orf24Q9Y442 160 aa8.23□□□□□ -1.09
CKAP2-202ENST00000378034 A0A1B0GV90 55 aa8.22□□□□□ -1.09
CKAP2-202ENST00000378034 M0R143 59 aa8.22□□□□□ -1.09
CKAP2-202ENST00000378034 RPL24P83731 157 aaKnown RBP8.22□□□□□ -1.09
CKAP2-202ENST00000378034 SNHG12Q9BXW3 62 aa8.22□□□□□ -1.09
CKAP2-202ENST00000378034 SPATA45Q537H7 98 aa8.21□□□□□ -1.09
CKAP2-202ENST00000378034 A0A0U1RRA0 63 aa8.21□□□□□ -1.1
CKAP2-202ENST00000378034 UBE2BP63146 152 aa8.21□□□□□ -1.1
CKAP2-202ENST00000378034 MRPL55Q7Z7F7 128 aaKnown RBP8.21□□□□□ -1.1
CKAP2-202ENST00000378034 NKAPP1Q8N9T2 125 aa8.21□□□□□ -1.1
CKAP2-202ENST00000378034 PSORS1C2Q9UIG4 136 aa8.21□□□□□ -1.1
CKAP2-202ENST00000378034 MIR7-3HGQ8N6C7 128 aa8.2□□□□□ -1.1
CKAP2-202ENST00000378034 ATOH7Q8N100 152 aa8.19□□□□□ -1.1
CKAP2-202ENST00000378034 IGKV2D-26A0A0A0MRZ7 120 aa8.19□□□□□ -1.1
CKAP2-202ENST00000378034 A0A0J9YXY3 114 aa8.19□□□□□ -1.1
CKAP2-202ENST00000378034 VPREB1P12018 145 aa8.19□□□□□ -1.1
CKAP2-202ENST00000378034 UQCR10Q9UDW1 63 aa8.19□□□□□ -1.1
CKAP2-202ENST00000378034 ABCA13Q86UQ4 5058 aa8.18□□□□□ -1.1
CKAP2-202ENST00000378034 LOC107984156A0A0G2JMH3 177 aa8.17□□□□□ -1.1
CKAP2-202ENST00000378034 ZNF815PA8K554 130 aa8.17□□□□□ -1.1
CKAP2-202ENST00000378034 ANKRD39Q53RE8 183 aa8.17□□□□□ -1.1
CKAP2-202ENST00000378034 ARL17AQ8IVW1 177 aa8.17□□□□□ -1.1
CKAP2-202ENST00000378034 LINC00167Q96N53 147 aa8.17□□□□□ -1.1
CKAP2-202ENST00000378034 TIMM17BO60830 172 aa8.17□□□□□ -1.1
CKAP2-202ENST00000378034 C1orf137Q5JT78 98 aa8.17□□□□□ -1.1
CKAP2-202ENST00000378034 KRTAP11-1Q8IUC1 163 aa8.17□□□□□ -1.1
CKAP2-202ENST00000378034 HSBP1L1C9JCN9 74 aa8.16□□□□□ -1.1
CKAP2-202ENST00000378034 HNRNPA3P51991 378 aaKnown RBP8.16□□□□□ -1.1
CKAP2-202ENST00000378034 BOD1L2Q8IYS8 172 aa8.15□□□□□ -1.1
CKAP2-202ENST00000378034 SPINK6Q6UWN8 80 aa8.15□□□□□ -1.11
CKAP2-202ENST00000378034 SRSF9Q13242 221 aaKnown RBP eCLIP8.14□□□□□ -1.11
CKAP2-202ENST00000378034 DAND5Q8N907 189 aa8.14□□□□□ -1.11
CKAP2-202ENST00000378034 IGLV7-43P04211 117 aa8.13□□□□□ -1.11
CKAP2-202ENST00000378034 Q8NDZ9 215 aa8.13□□□□□ -1.11
CKAP2-202ENST00000378034 TTTY13Q9BZ97 58 aa8.13□□□□□ -1.11
CKAP2-202ENST00000378034 PCLOQ9Y6V0 5065 aa8.13□□□□□ -1.11
CKAP2-202ENST00000378034 GAGE10A6NGK3 116 aa8.13□□□□□ -1.11
CKAP2-202ENST00000378034 RPL37AP8A6NKH3 93 aa8.13□□□□□ -1.11
CKAP2-202ENST00000378034 M0R378 163 aa8.13□□□□□ -1.11
CKAP2-202ENST00000378034 ADAMTSL4-AS1Q5T5F5 129 aa8.13□□□□□ -1.11
CKAP2-202ENST00000378034 IGLV1-50A0A075B6I6 118 aa8.12□□□□□ -1.11
CKAP2-202ENST00000378034 LITAFQ99732 161 aa8.12□□□□□ -1.11
CKAP2-202ENST00000378034 SCGB1D4Q6XE38 83 aa8.11□□□□□ -1.11
CKAP2-202ENST00000378034 NDUFC2O95298 119 aa8.11□□□□□ -1.11
CKAP2-202ENST00000378034 PCP2Q8IVA1 136 aa8.11□□□□□ -1.11
CKAP2-202ENST00000378034 TMEM238C9JI98 176 aa8.1□□□□□ -1.11
CKAP2-202ENST00000378034 BCE1O60756 84 aa8.1□□□□□ -1.11
CKAP2-202ENST00000378034 OXTP01178 125 aa8.1□□□□□ -1.11
CKAP2-202ENST00000378034 FLG2Q5D862 2391 aaPredicted RBP8.1□□□□□ -1.11
CKAP2-202ENST00000378034 IGKV2-28A0A075B6P5 120 aa8.1□□□□□ -1.11
CKAP2-202ENST00000378034 TRBV10-2A0A0K0K1G8 114 aa8.1□□□□□ -1.11
CKAP2-202ENST00000378034 KRTAP29-1A8MX34 341 aaPredicted RBP8.1□□□□□ -1.11
CKAP2-202ENST00000378034 IGKV2D-28P01615 120 aa8.1□□□□□ -1.11
CKAP2-202ENST00000378034 COL5A1-AS1Q5SY13 56 aa8.09□□□□□ -1.11
CKAP2-202ENST00000378034 Q6ZVH6 145 aa8.09□□□□□ -1.11
CKAP2-202ENST00000378034 LINC00308Q8TCZ7 52 aa8.09□□□□□ -1.11
CKAP2-202ENST00000378034 COPS9Q8WXC6 57 aa8.09□□□□□ -1.11
CKAP2-202ENST00000378034 DIRC1Q969H9 104 aa8.09□□□□□ -1.11
CKAP2-202ENST00000378034 SPANXDQ9BXN6 97 aa8.09□□□□□ -1.11
CKAP2-202ENST00000378034 SPANXB1Q9NS25 103 aaPredicted RBP8.09□□□□□ -1.11
CKAP2-202ENST00000378034 SPANXCQ9NY87 97 aa8.09□□□□□ -1.11
CKAP2-202ENST00000378034 BATFQ16520 125 aa8.08□□□□□ -1.12
CKAP2-202ENST00000378034 SOSTDC1Q6X4U4 206 aa8.08□□□□□ -1.12
CKAP2-202ENST00000378034 NCR3O14931 201 aa8.08□□□□□ -1.12
CKAP2-202ENST00000378034 ZNF861PO60384 105 aa8.08□□□□□ -1.12
CKAP2-202ENST00000378034 REG3GQ6UW15 175 aa8.08□□□□□ -1.12
CKAP2-202ENST00000378034 PPDPFQ9H3Y8 114 aa8.08□□□□□ -1.12
CKAP2-202ENST00000378034 PKHD1L1Q86WI1 4243 aa8.08□□□□□ -1.12
CKAP2-202ENST00000378034 NPC2P61916 151 aa8.07□□□□□ -1.12
CKAP2-202ENST00000378034 IFITM1P13164 125 aa8.06□□□□□ -1.12
CKAP2-202ENST00000378034 RPL28P46779 137 aaKnown RBP8.06□□□□□ -1.12
CKAP2-202ENST00000378034 TMEM126AQ9H061 195 aa8.06□□□□□ -1.12
CKAP2-202ENST00000378034 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
CKAP2-202ENST00000378034 SLC25A34Q6PIV7 304 aa8.06□□□□□ -1.12
CKAP2-202ENST00000378034 H0Y9J4 135 aa8.05□□□□□ -1.12
CKAP2-202ENST00000378034 PRYO14603 147 aa8.05□□□□□ -1.12
CKAP2-202ENST00000378034 KCNQ1DNQ9H478 68 aa8.05□□□□□ -1.12
CKAP2-202ENST00000378034 TRBV10-3A0A0K0K1G6 114 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms