RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 Q8NAQ8 132 aa8.94□□□□□ -0.98
ACTN1-202ENST00000376839 KLK12Q9UKR0 248 aa8.93□□□□□ -0.98
ACTN1-202ENST00000376839 SERP2Q8N6R1 65 aa8.93□□□□□ -0.98
ACTN1-202ENST00000376839 HIVEP1P15822 2718 aa8.92□□□□□ -0.98
ACTN1-202ENST00000376839 APOC4P55056 127 aa8.92□□□□□ -0.98
ACTN1-202ENST00000376839 FAM19A1Q7Z5A9 133 aa8.92□□□□□ -0.98
ACTN1-202ENST00000376839 NOTCH2Q04721 2471 aa8.91□□□□□ -0.98
ACTN1-202ENST00000376839 OTOGQ6ZRI0 2925 aa8.91□□□□□ -0.98
ACTN1-202ENST00000376839 LELP1Q5T871 98 aa8.91□□□□□ -0.98
ACTN1-202ENST00000376839 A0A0J9YWU9 116 aa8.91□□□□□ -0.98
ACTN1-202ENST00000376839 IGHV4-30-4P0DP06 118 aa8.91□□□□□ -0.98
ACTN1-202ENST00000376839 UPK3BQ9BT76 320 aa8.91□□□□□ -0.98
ACTN1-202ENST00000376839 LOC107984640A0A0U1RRK4 108 aa8.9□□□□□ -0.98
ACTN1-202ENST00000376839 ENHOQ6UWT2 76 aa8.9□□□□□ -0.98
ACTN1-202ENST00000376839 M0R2N4 97 aa8.9□□□□□ -0.98
ACTN1-202ENST00000376839 IGLV6-57P01721 117 aa8.9□□□□□ -0.98
ACTN1-202ENST00000376839 PRR34Q9NV39 138 aa8.9□□□□□ -0.98
ACTN1-202ENST00000376839 LYPD5Q6UWN5 251 aa8.89□□□□□ -0.99
ACTN1-202ENST00000376839 Q6ZQT0 140 aa8.89□□□□□ -0.99
ACTN1-202ENST00000376839 MIFP14174 115 aa8.89□□□□□ -0.99
ACTN1-202ENST00000376839 RBM3P98179 157 aaKnown RBP8.89□□□□□ -0.99
ACTN1-202ENST00000376839 ATP5EP2Q5VTU8 51 aa8.89□□□□□ -0.99
ACTN1-202ENST00000376839 XAGE1AQ9HD64 81 aa8.89□□□□□ -0.99
ACTN1-202ENST00000376839 ATRQ13535 2644 aa8.88□□□□□ -0.99
ACTN1-202ENST00000376839 TRAV23DV6A0A075B6W5 121 aa8.88□□□□□ -0.99
ACTN1-202ENST00000376839 ZNF561-AS1K7EIQ3 104 aa8.88□□□□□ -0.99
ACTN1-202ENST00000376839 SPART-AS1P0CW21 52 aa8.88□□□□□ -0.99
ACTN1-202ENST00000376839 UBL5Q9BZL1 73 aa8.88□□□□□ -0.99
ACTN1-202ENST00000376839 C6orf48Q9UBA6 75 aa8.88□□□□□ -0.99
ACTN1-202ENST00000376839 LAMTOR3Q9UHA4 124 aa8.88□□□□□ -0.99
ACTN1-202ENST00000376839 TRBV10-3A0A0K0K1G6 114 aa8.88□□□□□ -0.99
ACTN1-202ENST00000376839 Q6ZQY7 126 aa8.88□□□□□ -0.99
ACTN1-202ENST00000376839 HECTD1Q9ULT8 2610 aa8.87□□□□□ -0.99
ACTN1-202ENST00000376839 NSD1Q96L73 2696 aaPredicted RBP8.87□□□□□ -0.99
ACTN1-202ENST00000376839 GHRHP01286 108 aa8.86□□□□□ -0.99
ACTN1-202ENST00000376839 MUC7Q8TAX7 377 aa8.86□□□□□ -0.99
ACTN1-202ENST00000376839 LOC110117498A0A087WWA1 95 aa8.85□□□□□ -0.99
ACTN1-202ENST00000376839 GVQW2A0A096LPI5 108 aaPredicted RBP8.85□□□□□ -0.99
ACTN1-202ENST00000376839 INAFM1C9JVW0 142 aa8.85□□□□□ -0.99
ACTN1-202ENST00000376839 J3QKU1 62 aa8.84□□□□□ -0.99
ACTN1-202ENST00000376839 HIGD2BQ4VC39 106 aa8.84□□□□□ -0.99
ACTN1-202ENST00000376839 J3KT08 172 aa8.83□□□□□ -1
ACTN1-202ENST00000376839 DIRC1Q969H9 104 aa8.83□□□□□ -1
ACTN1-202ENST00000376839 TEP1Q99973 2627 aaKnown RBP8.83□□□□□ -1
ACTN1-202ENST00000376839 WFDC10BQ8IUB3 73 aa8.82□□□□□ -1
ACTN1-202ENST00000376839 DSCR8Q96T75 97 aa8.82□□□□□ -1
ACTN1-202ENST00000376839 PKD1L1Q8TDX9 2849 aa8.82□□□□□ -1
ACTN1-202ENST00000376839 TMEM258P61165 79 aa8.81□□□□□ -1
ACTN1-202ENST00000376839 ZNF73O43830 326 aaPredicted RBP8.81□□□□□ -1
ACTN1-202ENST00000376839 Q6ZVQ6 151 aa8.81□□□□□ -1
ACTN1-202ENST00000376839 LINC01547P58512 204 aaPredicted RBP8.81□□□□□ -1
ACTN1-202ENST00000376839 HAMPP81172 84 aa8.8□□□□□ -1
ACTN1-202ENST00000376839 CAMK2N2Q96S95 79 aa8.79□□□□□ -1
ACTN1-202ENST00000376839 VPREB1P12018 145 aa8.79□□□□□ -1
ACTN1-202ENST00000376839 COX7BP24311 80 aa8.79□□□□□ -1
ACTN1-202ENST00000376839 DPH3Q96FX2 82 aa8.79□□□□□ -1
ACTN1-202ENST00000376839 FAM19A5Q7Z5A7 132 aaPredicted RBP8.78□□□□□ -1
ACTN1-202ENST00000376839 RETNQ9HD89 108 aa8.78□□□□□ -1
ACTN1-202ENST00000376839 ELOF1P60002 83 aaKnown RBP8.78□□□□□ -1
ACTN1-202ENST00000376839 KRTAP26-1Q6PEX3 210 aa8.78□□□□□ -1
ACTN1-202ENST00000376839 RPS28P62857 69 aaKnown RBP8.77□□□□□ -1
ACTN1-202ENST00000376839 Q6ZRU5 148 aa8.77□□□□□ -1
ACTN1-202ENST00000376839 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.77□□□□□ -1.01
ACTN1-202ENST00000376839 OXTP01178 125 aa8.76□□□□□ -1.01
ACTN1-202ENST00000376839 KPRPQ5T749 579 aaPredicted RBP8.76□□□□□ -1.01
ACTN1-202ENST00000376839 C20orf197Q8N268 126 aa8.76□□□□□ -1.01
ACTN1-202ENST00000376839 TRBV7-4A0A0J9YYF1 115 aa8.76□□□□□ -1.01
ACTN1-202ENST00000376839 C15orf56Q8N910 161 aa8.76□□□□□ -1.01
ACTN1-202ENST00000376839 PDE6GP18545 87 aa8.75□□□□□ -1.01
ACTN1-202ENST00000376839 ANK2Q01484 3957 aa8.75□□□□□ -1.01
ACTN1-202ENST00000376839 KMT2BQ9UMN6 2715 aaPredicted RBP8.75□□□□□ -1.01
ACTN1-202ENST00000376839 TRAV10A0A0B4J240 114 aa8.75□□□□□ -1.01
ACTN1-202ENST00000376839 H3BQ85 93 aa8.74□□□□□ -1.01
ACTN1-202ENST00000376839 EGFEM1PQ0D2K5 195 aa8.74□□□□□ -1.01
ACTN1-202ENST00000376839 SCXQ7RTU7 201 aa8.74□□□□□ -1.01
ACTN1-202ENST00000376839 Q6ZTC4 211 aa8.74□□□□□ -1.01
ACTN1-202ENST00000376839 M0R378 163 aa8.73□□□□□ -1.01
ACTN1-202ENST00000376839 TENM3Q9P273 2699 aa8.72□□□□□ -1.01
ACTN1-202ENST00000376839 TRBV7-6A0A0J9YX20 115 aa8.72□□□□□ -1.01
ACTN1-202ENST00000376839 NDUFC2-KCTD14E9PQ53 114 aa8.72□□□□□ -1.01
ACTN1-202ENST00000376839 CXCL6P80162 114 aa8.72□□□□□ -1.01
ACTN1-202ENST00000376839 LINC00528Q8N1L1 170 aa8.72□□□□□ -1.01
ACTN1-202ENST00000376839 WIPF1O43516 503 aa8.71□□□□□ -1.02
ACTN1-202ENST00000376839 Q6ZRP5 223 aa8.71□□□□□ -1.02
ACTN1-202ENST00000376839 TRAV7A0A075B6U4 112 aa8.71□□□□□ -1.02
ACTN1-202ENST00000376839 ESRGQ1W209 222 aa8.71□□□□□ -1.02
ACTN1-202ENST00000376839 OXLD1Q5BKU9 147 aa8.7□□□□□ -1.02
ACTN1-202ENST00000376839 H3BNG1 76 aa8.69□□□□□ -1.02
ACTN1-202ENST00000376839 BCE1O60756 84 aa8.68□□□□□ -1.02
ACTN1-202ENST00000376839 C1orf43Q9BWL3 253 aa8.68□□□□□ -1.02
ACTN1-202ENST00000376839 IGKV2D-24A0A075B6R9 120 aa8.67□□□□□ -1.02
ACTN1-202ENST00000376839 KRTAP10-11P60412 298 aa8.67□□□□□ -1.02
ACTN1-202ENST00000376839 H7BZZ5 65 aa8.67□□□□□ -1.02
ACTN1-202ENST00000376839 SNURFQ9Y675 71 aa8.67□□□□□ -1.02
ACTN1-202ENST00000376839 SERTAD4-AS1Q5TG53 156 aa8.65□□□□□ -1.02
ACTN1-202ENST00000376839 Q8N9L7 120 aa8.65□□□□□ -1.03
ACTN1-202ENST00000376839 TM2D3Q9BRN9 247 aa8.65□□□□□ -1.03
ACTN1-202ENST00000376839 FAM236DA0A1B0GTK5 79 aa8.64□□□□□ -1.03
ACTN1-202ENST00000376839 FAM236CP0DP71 79 aa8.64□□□□□ -1.03
ACTN1-202ENST00000376839 SYCNQ0VAF6 134 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms