RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 NDUFC2O95298 119 aa6.47□□□□□ -1.37
TRIM39-202ENST00000376659 COX17Q14061 63 aa6.47□□□□□ -1.37
TRIM39-202ENST00000376659 TENM3Q9P273 2699 aa6.47□□□□□ -1.37
TRIM39-202ENST00000376659 XCL1P47992 114 aa6.47□□□□□ -1.37
TRIM39-202ENST00000376659 LINC00269Q8N2A0 174 aa6.47□□□□□ -1.37
TRIM39-202ENST00000376659 ATOX1O00244 68 aa6.47□□□□□ -1.37
TRIM39-202ENST00000376659 PAX4O43316 350 aa6.47□□□□□ -1.37
TRIM39-202ENST00000376659 ENHOQ6UWT2 76 aa6.47□□□□□ -1.37
TRIM39-202ENST00000376659 BAHCC1Q9P281 2608 aa6.47□□□□□ -1.37
TRIM39-202ENST00000376659 IGHV4-30-4P0DP06 118 aa6.46□□□□□ -1.37
TRIM39-202ENST00000376659 APOC4P55056 127 aa6.46□□□□□ -1.37
TRIM39-202ENST00000376659 RETNQ9HD89 108 aa6.46□□□□□ -1.37
TRIM39-202ENST00000376659 CHCHD10Q8WYQ3 142 aaPredicted RBP6.46□□□□□ -1.38
TRIM39-202ENST00000376659 EGFEM1PQ0D2K5 195 aa6.46□□□□□ -1.38
TRIM39-202ENST00000376659 LINC00643Q86TS7 51 aa6.46□□□□□ -1.38
TRIM39-202ENST00000376659 HECTD1Q9ULT8 2610 aa6.46□□□□□ -1.38
TRIM39-202ENST00000376659 CRPP02741 224 aa6.45□□□□□ -1.38
TRIM39-202ENST00000376659 CLPSL2Q6UWE3 100 aa6.45□□□□□ -1.38
TRIM39-202ENST00000376659 IGKV3OR2-268A0A0C4DH90 116 aa6.45□□□□□ -1.38
TRIM39-202ENST00000376659 REG3AQ06141 175 aa6.45□□□□□ -1.38
TRIM39-202ENST00000376659 LELP1Q5T871 98 aa6.45□□□□□ -1.38
TRIM39-202ENST00000376659 A0A0J9YWU9 116 aa6.45□□□□□ -1.38
TRIM39-202ENST00000376659 C10orf25Q5T742 122 aa6.45□□□□□ -1.38
TRIM39-202ENST00000376659 COL7A1Q02388 2944 aa6.44□□□□□ -1.38
TRIM39-202ENST00000376659 GVQW2A0A096LPI5 108 aaPredicted RBP6.44□□□□□ -1.38
TRIM39-202ENST00000376659 Q9HAA7 133 aa6.44□□□□□ -1.38
TRIM39-202ENST00000376659 TOMM7Q9P0U1 55 aa6.44□□□□□ -1.38
TRIM39-202ENST00000376659 BAALC-AS2P0C853 105 aa6.43□□□□□ -1.38
TRIM39-202ENST00000376659 LINC00158P58513 81 aa6.43□□□□□ -1.38
TRIM39-202ENST00000376659 CXCL5P42830 114 aa6.43□□□□□ -1.38
TRIM39-202ENST00000376659 C9orf116Q5BN46 136 aaPredicted RBP6.43□□□□□ -1.38
TRIM39-202ENST00000376659 MAST4O15021 2626 aa6.43□□□□□ -1.38
TRIM39-202ENST00000376659 H3BNG1 76 aa6.42□□□□□ -1.38
TRIM39-202ENST00000376659 HIST1H4AP62805 103 aaKnown RBP6.42□□□□□ -1.38
TRIM39-202ENST00000376659 ACYP1P07311 99 aa6.42□□□□□ -1.38
TRIM39-202ENST00000376659 PRR3P79522 188 aaKnown RBP6.42□□□□□ -1.38
TRIM39-202ENST00000376659 LYPD5Q6UWN5 251 aa6.42□□□□□ -1.38
TRIM39-202ENST00000376659 C6orf223Q8N319 242 aa6.42□□□□□ -1.38
TRIM39-202ENST00000376659 HECTD4Q9Y4D8 3996 aa6.42□□□□□ -1.38
TRIM39-202ENST00000376659 IGLV6-57P01721 117 aa6.41□□□□□ -1.38
TRIM39-202ENST00000376659 DAD1P61803 113 aa6.41□□□□□ -1.38
TRIM39-202ENST00000376659 SERP2Q8N6R1 65 aa6.41□□□□□ -1.38
TRIM39-202ENST00000376659 H0YGX0 51 aa6.41□□□□□ -1.38
TRIM39-202ENST00000376659 C11orf68Q9H3H3 251 aaKnown RBP6.41□□□□□ -1.38
TRIM39-202ENST00000376659 C6orf226Q5I0X4 101 aa6.4□□□□□ -1.38
TRIM39-202ENST00000376659 SPART-AS1P0CW21 52 aa6.39□□□□□ -1.39
TRIM39-202ENST00000376659 RPL18AQ02543 176 aaKnown RBP6.39□□□□□ -1.39
TRIM39-202ENST00000376659 MUC7Q8TAX7 377 aa6.39□□□□□ -1.39
TRIM39-202ENST00000376659 PLECQ15149 4684 aaKnown RBP6.39□□□□□ -1.39
TRIM39-202ENST00000376659 IGLV10-54A0A075B6I4 117 aa6.39□□□□□ -1.39
TRIM39-202ENST00000376659 ANGP03950 147 aaKnown RBP6.39□□□□□ -1.39
TRIM39-202ENST00000376659 C6orf48Q9UBA6 75 aa6.39□□□□□ -1.39
TRIM39-202ENST00000376659 FLNBO75369 2602 aaKnown RBP6.38□□□□□ -1.39
TRIM39-202ENST00000376659 UNQ6190/PRO20217Q6UXQ8 127 aa6.38□□□□□ -1.39
TRIM39-202ENST00000376659 Q8N814 137 aa6.38□□□□□ -1.39
TRIM39-202ENST00000376659 C15orf56Q8N910 161 aa6.38□□□□□ -1.39
TRIM39-202ENST00000376659 ATRQ13535 2644 aa6.38□□□□□ -1.39
TRIM39-202ENST00000376659 LECT2O14960 151 aa6.38□□□□□ -1.39
TRIM39-202ENST00000376659 IGKV3D-7A0A0C4DH55 119 aa6.37□□□□□ -1.39
TRIM39-202ENST00000376659 CYSRT1A8MQ03 144 aa6.37□□□□□ -1.39
TRIM39-202ENST00000376659 WFDC10BQ8IUB3 73 aa6.36□□□□□ -1.39
TRIM39-202ENST00000376659 SLPIP03973 132 aa6.36□□□□□ -1.39
TRIM39-202ENST00000376659 KRTAP24-1Q3LI83 254 aa6.36□□□□□ -1.39
TRIM39-202ENST00000376659 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
TRIM39-202ENST00000376659 STARD9Q9P2P6 4700 aa6.35□□□□□ -1.39
TRIM39-202ENST00000376659 A0A087WVE0 104 aa6.35□□□□□ -1.39
TRIM39-202ENST00000376659 LINC00575Q6W349 94 aa6.35□□□□□ -1.39
TRIM39-202ENST00000376659 INAFM2P0DMQ5 153 aa6.35□□□□□ -1.39
TRIM39-202ENST00000376659 SPAG11BQ08648 103 aa6.35□□□□□ -1.39
TRIM39-202ENST00000376659 VPS13DQ5THJ4 4388 aa6.34□□□□□ -1.39
TRIM39-202ENST00000376659 NCR3O14931 201 aa6.34□□□□□ -1.39
TRIM39-202ENST00000376659 PMAIP1Q13794 54 aa6.34□□□□□ -1.39
TRIM39-202ENST00000376659 SMIM26A0A096LP01 95 aa6.34□□□□□ -1.39
TRIM39-202ENST00000376659 OXLD1Q5BKU9 147 aa6.34□□□□□ -1.39
TRIM39-202ENST00000376659 C14orf132Q9NPU4 83 aa6.34□□□□□ -1.39
TRIM39-202ENST00000376659 LINC00846Q9NV44 126 aa6.34□□□□□ -1.39
TRIM39-202ENST00000376659 SERP1Q9Y6X1 66 aa6.34□□□□□ -1.39
TRIM39-202ENST00000376659 USP17L23D6RBM5 183 aa6.34□□□□□ -1.39
TRIM39-202ENST00000376659 Q6ZTC4 211 aa6.34□□□□□ -1.39
TRIM39-202ENST00000376659 C20orf197Q8N268 126 aa6.34□□□□□ -1.39
TRIM39-202ENST00000376659 VPREB1P12018 145 aa6.33□□□□□ -1.4
TRIM39-202ENST00000376659 ESRGQ1W209 222 aa6.33□□□□□ -1.4
TRIM39-202ENST00000376659 KLK12Q9UKR0 248 aa6.33□□□□□ -1.4
TRIM39-202ENST00000376659 DNAH2Q9P225 4427 aa6.33□□□□□ -1.4
TRIM39-202ENST00000376659 ZNF561-AS1K7EIQ3 104 aa6.32□□□□□ -1.4
TRIM39-202ENST00000376659 KPRPQ5T749 579 aaPredicted RBP6.32□□□□□ -1.4
TRIM39-202ENST00000376659 CCKP06307 115 aa6.32□□□□□ -1.4
TRIM39-202ENST00000376659 FAM19A1Q7Z5A9 133 aa6.32□□□□□ -1.4
TRIM39-202ENST00000376659 FRAS1Q86XX4 4008 aa6.32□□□□□ -1.4
TRIM39-202ENST00000376659 ORMDL1Q9P0S3 153 aa6.32□□□□□ -1.4
TRIM39-202ENST00000376659 LINC00474Q9P2X8 69 aa6.31□□□□□ -1.4
TRIM39-202ENST00000376659 C6orf99Q4VX62 202 aa6.31□□□□□ -1.4
TRIM39-202ENST00000376659 Q6JHZ5 121 aa6.31□□□□□ -1.4
TRIM39-202ENST00000376659 FP248Q71RG6 208 aaPredicted RBP6.31□□□□□ -1.4
TRIM39-202ENST00000376659 LOC110117498A0A087WWA1 95 aa6.3□□□□□ -1.4
TRIM39-202ENST00000376659 RBM3P98179 157 aaKnown RBP6.3□□□□□ -1.4
TRIM39-202ENST00000376659 DNAH6Q9C0G6 4158 aa6.3□□□□□ -1.4
TRIM39-202ENST00000376659 LINC01556Q5JQF7 62 aa6.3□□□□□ -1.4
TRIM39-202ENST00000376659 NDUFC2-KCTD14E9PQ53 114 aa6.3□□□□□ -1.4
TRIM39-202ENST00000376659 Q6ZQT0 140 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms